RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 ZNF876PQ49A33 203 aa13□□□□□ -0.33
RAB39A-201ENST00000320578 TEX43Q6ZNM6 134 aa13□□□□□ -0.33
RAB39A-201ENST00000320578 C1orf158Q8N1D5 194 aa13□□□□□ -0.33
RAB39A-201ENST00000320578 C11orf72Q8NBR9 251 aa13□□□□□ -0.33
RAB39A-201ENST00000320578 TMEM70Q9BUB7 260 aa13□□□□□ -0.33
RAB39A-201ENST00000320578 XCL2Q9UBD3 114 aa13□□□□□ -0.33
RAB39A-201ENST00000320578 HBDP02042 147 aa12.99□□□□□ -0.33
RAB39A-201ENST00000320578 CRYGDP07320 174 aa12.99□□□□□ -0.33
RAB39A-201ENST00000320578 MGPP08493 103 aa12.99□□□□□ -0.33
RAB39A-201ENST00000320578 A0A096LNJ9 63 aa12.99□□□□□ -0.33
RAB39A-201ENST00000320578 WIPF1O43516 503 aa12.98□□□□□ -0.33
RAB39A-201ENST00000320578 GIG44P09565 113 aaPredicted RBP12.98□□□□□ -0.33
RAB39A-201ENST00000320578 SUMO2P61956 95 aaKnown RBP12.98□□□□□ -0.33
RAB39A-201ENST00000320578 ZNF747Q9BV97 191 aa12.98□□□□□ -0.33
RAB39A-201ENST00000320578 SMIM2Q9BVW6 85 aa12.98□□□□□ -0.33
RAB39A-201ENST00000320578 JPT2Q9H910 190 aa12.98□□□□□ -0.33
RAB39A-201ENST00000320578 EDA2RQ9HAV5 297 aa12.98□□□□□ -0.33
RAB39A-201ENST00000320578 FCER1GP30273 86 aa12.97□□□□□ -0.33
RAB39A-201ENST00000320578 SPATA12Q7Z6I5 190 aa12.97□□□□□ -0.33
RAB39A-201ENST00000320578 GTSCR1Q86UQ5 136 aa12.97□□□□□ -0.33
RAB39A-201ENST00000320578 MAP1LC3CQ9BXW4 147 aa12.97□□□□□ -0.33
RAB39A-201ENST00000320578 A8MWV9 139 aa12.97□□□□□ -0.33
RAB39A-201ENST00000320578 SYS1-DBNDD2H3BUS1 97 aa12.97□□□□□ -0.33
RAB39A-201ENST00000320578 PKIAP61925 76 aa12.97□□□□□ -0.33
RAB39A-201ENST00000320578 PET117Q6UWS5 81 aa12.97□□□□□ -0.33
RAB39A-201ENST00000320578 TMEM208Q9BTX3 173 aa12.97□□□□□ -0.33
RAB39A-201ENST00000320578 GOLT1BQ9Y3E0 138 aa12.97□□□□□ -0.33
RAB39A-201ENST00000320578 TRBV6-5A0A0K0K1A5 114 aa12.96□□□□□ -0.33
RAB39A-201ENST00000320578 HTN1P15515 57 aa12.96□□□□□ -0.33
RAB39A-201ENST00000320578 SUMO4Q6EEV6 95 aa12.96□□□□□ -0.33
RAB39A-201ENST00000320578 IL17DQ8TAD2 202 aa12.96□□□□□ -0.33
RAB39A-201ENST00000320578 BAHCC1Q9P281 2608 aa12.96□□□□□ -0.33
RAB39A-201ENST00000320578 A0A087WWL8 130 aa12.95□□□□□ -0.34
RAB39A-201ENST00000320578 LAGE3Q14657 143 aa12.95□□□□□ -0.34
RAB39A-201ENST00000320578 KRTAP24-1Q3LI83 254 aa12.95□□□□□ -0.34
RAB39A-201ENST00000320578 WFDC10AQ9H1F0 79 aa12.95□□□□□ -0.34
RAB39A-201ENST00000320578 PCP4L1A6NKN8 68 aa12.95□□□□□ -0.34
RAB39A-201ENST00000320578 CSNK1G2-AS1Q8NCQ2 148 aa12.95□□□□□ -0.34
RAB39A-201ENST00000320578 C20orf202A1L168 122 aa12.94□□□□□ -0.34
RAB39A-201ENST00000320578 CYSRT1A8MQ03 144 aa12.94□□□□□ -0.34
RAB39A-201ENST00000320578 LINC00173Q6ZV60 143 aa12.94□□□□□ -0.34
RAB39A-201ENST00000320578 ZNF664Q8N3J9 261 aa12.94□□□□□ -0.34
RAB39A-201ENST00000320578 TMEM263Q8WUH6 116 aaKnown RBP12.94□□□□□ -0.34
RAB39A-201ENST00000320578 F5H697 171 aa12.93□□□□□ -0.34
RAB39A-201ENST00000320578 TSTD3H0UI37 97 aa12.93□□□□□ -0.34
RAB39A-201ENST00000320578 M0QY20 66 aa12.93□□□□□ -0.34
RAB39A-201ENST00000320578 ORMDL2Q53FV1 153 aa12.93□□□□□ -0.34
RAB39A-201ENST00000320578 UFSP1Q6NVU6 142 aa12.93□□□□□ -0.34
RAB39A-201ENST00000320578 RNASE8Q8TDE3 154 aaKnown RBP12.93□□□□□ -0.34
RAB39A-201ENST00000320578 RPL39LQ96EH5 51 aaKnown RBP12.93□□□□□ -0.34
RAB39A-201ENST00000320578 ST20Q9HBF5 79 aa12.93□□□□□ -0.34
RAB39A-201ENST00000320578 RHODO00212 210 aa12.92□□□□□ -0.34
RAB39A-201ENST00000320578 RPL35AP18077 110 aaKnown RBP12.92□□□□□ -0.34
RAB39A-201ENST00000320578 POLR2KP53803 58 aaKnown RBP12.92□□□□□ -0.34
RAB39A-201ENST00000320578 SPATA3Q8NHX4 192 aa12.92□□□□□ -0.34
RAB39A-201ENST00000320578 H7C1H1 209 aa12.92□□□□□ -0.34
RAB39A-201ENST00000320578 FAM74A4Q5TZK3 123 aa12.92□□□□□ -0.34
RAB39A-201ENST00000320578 ZNF705AQ6ZN79 300 aaPredicted RBP12.92□□□□□ -0.34
RAB39A-201ENST00000320578 PRM2P04554 102 aa12.91□□□□□ -0.34
RAB39A-201ENST00000320578 AZU1P20160 251 aa12.91□□□□□ -0.34
RAB39A-201ENST00000320578 ZNF56Q15929 161 aa12.91□□□□□ -0.34
RAB39A-201ENST00000320578 CSTL1Q9H114 145 aa12.91□□□□□ -0.34
RAB39A-201ENST00000320578 KIR2DL5BA0A0G2JN68 375 aa12.9□□□□□ -0.34
RAB39A-201ENST00000320578 KIR2DL5BA0A0G2JPC4 375 aa12.9□□□□□ -0.34
RAB39A-201ENST00000320578 VCYO14598 125 aa12.9□□□□□ -0.34
RAB39A-201ENST00000320578 RS1O15537 224 aa12.9□□□□□ -0.34
RAB39A-201ENST00000320578 G0S2P27469 103 aa12.9□□□□□ -0.34
RAB39A-201ENST00000320578 DAZ2Q13117 558 aaKnown RBP12.9□□□□□ -0.34
RAB39A-201ENST00000320578 LGALS9BQ3B8N2 356 aa12.9□□□□□ -0.34
RAB39A-201ENST00000320578 LINC01545Q5VT33 79 aa12.9□□□□□ -0.34
RAB39A-201ENST00000320578 KIR2DL5AQ8N109 375 aa12.9□□□□□ -0.34
RAB39A-201ENST00000320578 VAMP8Q9BV40 100 aa12.9□□□□□ -0.34
RAB39A-201ENST00000320578 JMJD1CQ15652 2540 aa12.9□□□□□ -0.34
RAB39A-201ENST00000320578 LINC01549A6NIU2 74 aa12.9□□□□□ -0.34
RAB39A-201ENST00000320578 ZFP2Q6ZN57 461 aa12.9□□□□□ -0.34
RAB39A-201ENST00000320578 TMEM158Q8WZ71 300 aa12.9□□□□□ -0.34
RAB39A-201ENST00000320578 IFI27L1Q96BM0 104 aa12.9□□□□□ -0.34
RAB39A-201ENST00000320578 C16orf74Q96GX8 76 aa12.9□□□□□ -0.34
RAB39A-201ENST00000320578 TRBV27A0A0K0K1C4 114 aa12.89□□□□□ -0.35
RAB39A-201ENST00000320578 CFAP126Q5VTH2 177 aa12.89□□□□□ -0.35
RAB39A-201ENST00000320578 SHISA2Q6UWI4 295 aa12.89□□□□□ -0.35
RAB39A-201ENST00000320578 TEP1Q99973 2627 aaKnown RBP12.89□□□□□ -0.35
RAB39A-201ENST00000320578 IGHV3OR16-12A0A075B7B8 117 aa12.88□□□□□ -0.35
RAB39A-201ENST00000320578 TCAPO15273 167 aa12.88□□□□□ -0.35
RAB39A-201ENST00000320578 ATP5LO75964 103 aa12.88□□□□□ -0.35
RAB39A-201ENST00000320578 LGALS9CQ6DKI2 356 aa12.88□□□□□ -0.35
RAB39A-201ENST00000320578 NIPBLQ6KC79 2804 aaeCLIP12.87□□□□□ -0.35
RAB39A-201ENST00000320578 KIR2DL5BQ8NHK3 375 aa12.87□□□□□ -0.35
RAB39A-201ENST00000320578 ATRQ13535 2644 aa12.86□□□□□ -0.35
RAB39A-201ENST00000320578 TRAV9-2A0A087WT02 112 aa12.86□□□□□ -0.35
RAB39A-201ENST00000320578 SDHAF1A6NFY7 115 aa12.86□□□□□ -0.35
RAB39A-201ENST00000320578 NUDT3O95989 172 aa12.86□□□□□ -0.35
RAB39A-201ENST00000320578 RRN3P1Q2M238 152 aa12.86□□□□□ -0.35
RAB39A-201ENST00000320578 KIR2DL4Q99706 377 aa12.86□□□□□ -0.35
RAB39A-201ENST00000320578 OVOL2Q9BRP0 275 aa12.86□□□□□ -0.35
RAB39A-201ENST00000320578 CIDEAO60543 219 aa12.85□□□□□ -0.35
RAB39A-201ENST00000320578 IGLL1P15814 213 aa12.85□□□□□ -0.35
RAB39A-201ENST00000320578 PRIMA1Q86XR5 153 aa12.85□□□□□ -0.35
RAB39A-201ENST00000320578 TOMM6Q96B49 74 aa12.85□□□□□ -0.35
RAB39A-201ENST00000320578 PRO1933Q9H354 126 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms