RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 H3BUA1 57 aa9.93□□□□□ -0.82
CPNE1-201ENST00000317677 M0R3E3 92 aa9.93□□□□□ -0.82
CPNE1-201ENST00000317677 SCGB2A1O75556 95 aa9.93□□□□□ -0.82
CPNE1-201ENST00000317677 IGKCP01834 107 aa9.93□□□□□ -0.82
CPNE1-201ENST00000317677 ZNF688P0C7X2 276 aa9.93□□□□□ -0.82
CPNE1-201ENST00000317677 Q86TA4 180 aa9.93□□□□□ -0.82
CPNE1-201ENST00000317677 ZNF580Q9UK33 172 aa9.93□□□□□ -0.82
CPNE1-201ENST00000317677 VPREB3Q9UKI3 123 aa9.93□□□□□ -0.82
CPNE1-201ENST00000317677 TRBV7-3A0A075B6L6 115 aa9.92□□□□□ -0.82
CPNE1-201ENST00000317677 HOXA3O43365 443 aaPredicted RBP9.92□□□□□ -0.82
CPNE1-201ENST00000317677 BUB3O43684 328 aa9.92□□□□□ -0.82
CPNE1-201ENST00000317677 IGHV3-11P01762 117 aa9.92□□□□□ -0.82
CPNE1-201ENST00000317677 PF4V1P10720 104 aa9.92□□□□□ -0.82
CPNE1-201ENST00000317677 NDUFV3P56181 108 aaKnown RBP9.92□□□□□ -0.82
CPNE1-201ENST00000317677 KRTAP1-1Q07627 177 aa9.92□□□□□ -0.82
CPNE1-201ENST00000317677 MORN3Q6PF18 240 aaPredicted RBP9.92□□□□□ -0.82
CPNE1-201ENST00000317677 ASCL2Q99929 193 aa9.92□□□□□ -0.82
CPNE1-201ENST00000317677 IGHV3-66A0A0C4DH42 116 aa9.92□□□□□ -0.82
CPNE1-201ENST00000317677 D6R8Y8 96 aa9.92□□□□□ -0.82
CPNE1-201ENST00000317677 ATP5LO75964 103 aa9.92□□□□□ -0.82
CPNE1-201ENST00000317677 ASIPP42127 132 aa9.92□□□□□ -0.82
CPNE1-201ENST00000317677 GOLT1AQ6ZVE7 132 aa9.92□□□□□ -0.82
CPNE1-201ENST00000317677 LYPD1Q8N2G4 141 aa9.92□□□□□ -0.82
CPNE1-201ENST00000317677 U3KQE9 123 aa9.92□□□□□ -0.82
CPNE1-201ENST00000317677 ANK3Q12955 4377 aaKnown RBP9.91□□□□□ -0.82
CPNE1-201ENST00000317677 IGHV3OR16-13A0A075B7E8 117 aa9.91□□□□□ -0.82
CPNE1-201ENST00000317677 IGHV3-49A0A0A0MS15 119 aa9.91□□□□□ -0.82
CPNE1-201ENST00000317677 IGHV3-74A0A0B4J1X5 117 aa9.91□□□□□ -0.82
CPNE1-201ENST00000317677 LOC389332A0A1B0GUA5 103 aa9.91□□□□□ -0.82
CPNE1-201ENST00000317677 INAFM1C9JVW0 142 aa9.91□□□□□ -0.82
CPNE1-201ENST00000317677 M0QXV9 152 aa9.91□□□□□ -0.82
CPNE1-201ENST00000317677 DPM2O94777 84 aa9.91□□□□□ -0.82
CPNE1-201ENST00000317677 RPL7P18124 248 aaKnown RBP9.91□□□□□ -0.82
CPNE1-201ENST00000317677 HLA-DMBP28068 263 aa9.91□□□□□ -0.82
CPNE1-201ENST00000317677 PDE6HQ13956 83 aa9.91□□□□□ -0.82
CPNE1-201ENST00000317677 UNQ9165/PRO28630Q6UXU0 137 aa9.91□□□□□ -0.82
CPNE1-201ENST00000317677 GLMPQ8WWB7 406 aa9.91□□□□□ -0.82
CPNE1-201ENST00000317677 ZNF702PQ9H963 129 aa9.91□□□□□ -0.82
CPNE1-201ENST00000317677 IGFL4Q6B9Z1 124 aa9.9□□□□□ -0.82
CPNE1-201ENST00000317677 TTTY13Q9BZ97 58 aa9.9□□□□□ -0.82
CPNE1-201ENST00000317677 MAP1LC3AQ9H492 121 aa9.9□□□□□ -0.82
CPNE1-201ENST00000317677 YAE1D1Q9NRH1 226 aa9.9□□□□□ -0.82
CPNE1-201ENST00000317677 PSMB8P28062 276 aa9.9□□□□□ -0.83
CPNE1-201ENST00000317677 FCER1GP30273 86 aa9.9□□□□□ -0.83
CPNE1-201ENST00000317677 GAGE2BQ13066 116 aa9.9□□□□□ -0.83
CPNE1-201ENST00000317677 GAGE2EQ4V326 116 aa9.9□□□□□ -0.83
CPNE1-201ENST00000317677 LYRM7Q5U5X0 104 aa9.9□□□□□ -0.83
CPNE1-201ENST00000317677 USMG5Q96IX5 58 aa9.9□□□□□ -0.83
CPNE1-201ENST00000317677 GAGE2DQ9UEU5 116 aa9.9□□□□□ -0.83
CPNE1-201ENST00000317677 TWIST1Q15672 202 aa9.89□□□□□ -0.83
CPNE1-201ENST00000317677 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.89□□□□□ -0.83
CPNE1-201ENST00000317677 DUX5Q96PT3 197 aa9.89□□□□□ -0.83
CPNE1-201ENST00000317677 HIST1H4GQ99525 98 aa9.89□□□□□ -0.83
CPNE1-201ENST00000317677 UBE2D3P61077 147 aa9.88□□□□□ -0.83
CPNE1-201ENST00000317677 UBE2D2P62837 147 aa9.88□□□□□ -0.83
CPNE1-201ENST00000317677 MRPL51Q4U2R6 128 aaKnown RBP9.88□□□□□ -0.83
CPNE1-201ENST00000317677 ZC2HC1BQ5TFG8 222 aa9.88□□□□□ -0.83
CPNE1-201ENST00000317677 MAPKAPK5-AS1Q8N8E1 139 aa9.88□□□□□ -0.83
CPNE1-201ENST00000317677 CRLF1O75462 422 aa9.88□□□□□ -0.83
CPNE1-201ENST00000317677 IFITM1P13164 125 aa9.88□□□□□ -0.83
CPNE1-201ENST00000317677 PRNTQ86SH4 94 aa9.88□□□□□ -0.83
CPNE1-201ENST00000317677 GTSCR1Q86UQ5 136 aa9.88□□□□□ -0.83
CPNE1-201ENST00000317677 TMEM75Q8N9X5 138 aa9.88□□□□□ -0.83
CPNE1-201ENST00000317677 TRBV20-1A0A075B6N2 111 aa9.87□□□□□ -0.83
CPNE1-201ENST00000317677 CCDC179H3BU77 68 aa9.87□□□□□ -0.83
CPNE1-201ENST00000317677 METTL26Q96S19 204 aa9.87□□□□□ -0.83
CPNE1-201ENST00000317677 TMEM126AQ9H061 195 aa9.87□□□□□ -0.83
CPNE1-201ENST00000317677 IGKV2-40A0A087WW87 121 aaPredicted RBP9.86□□□□□ -0.83
CPNE1-201ENST00000317677 TRAV8-2A0A0B4J237 113 aa9.86□□□□□ -0.83
CPNE1-201ENST00000317677 NDUFA4O00483 81 aa9.86□□□□□ -0.83
CPNE1-201ENST00000317677 IGKV2D-40P01614 121 aaPredicted RBP9.86□□□□□ -0.83
CPNE1-201ENST00000317677 SPXQ9BT56 116 aa9.86□□□□□ -0.83
CPNE1-201ENST00000317677 AAMDCQ9H7C9 122 aa9.86□□□□□ -0.83
CPNE1-201ENST00000317677 MYMXA0A1B0GTQ4 84 aa9.86□□□□□ -0.83
CPNE1-201ENST00000317677 PRSS1P07477 247 aa9.86□□□□□ -0.83
CPNE1-201ENST00000317677 EDN2P20800 178 aa9.86□□□□□ -0.83
CPNE1-201ENST00000317677 TTC32Q5I0X7 151 aa9.86□□□□□ -0.83
CPNE1-201ENST00000317677 A8MWV9 139 aa9.85□□□□□ -0.83
CPNE1-201ENST00000317677 PRAC2D3DTV9 90 aa9.85□□□□□ -0.83
CPNE1-201ENST00000317677 K7EMI3 77 aa9.85□□□□□ -0.83
CPNE1-201ENST00000317677 CRIP1P50238 77 aa9.85□□□□□ -0.83
CPNE1-201ENST00000317677 AMN1Q8IY45 258 aa9.85□□□□□ -0.83
CPNE1-201ENST00000317677 RNF182Q8N6D2 247 aa9.85□□□□□ -0.83
CPNE1-201ENST00000317677 C8orf49Q96NF6 230 aa9.85□□□□□ -0.83
CPNE1-201ENST00000317677 NXT2Q9NPJ8 142 aaKnown RBP9.85□□□□□ -0.83
CPNE1-201ENST00000317677 NPYP01303 97 aa9.84□□□□□ -0.83
CPNE1-201ENST00000317677 CKS2P33552 79 aa9.84□□□□□ -0.83
CPNE1-201ENST00000317677 UBE2D1P51668 147 aa9.84□□□□□ -0.83
CPNE1-201ENST00000317677 FXYD7P58549 80 aa9.84□□□□□ -0.83
CPNE1-201ENST00000317677 GPHB5Q86YW7 130 aa9.84□□□□□ -0.83
CPNE1-201ENST00000317677 MYOZ3Q8TDC0 251 aa9.84□□□□□ -0.83
CPNE1-201ENST00000317677 TMEM160Q9NX00 188 aa9.84□□□□□ -0.83
CPNE1-201ENST00000317677 TMEM89A2RUT3 159 aa9.84□□□□□ -0.83
CPNE1-201ENST00000317677 Q8N2B8 174 aa9.84□□□□□ -0.83
CPNE1-201ENST00000317677 SNCGO76070 127 aa9.83□□□□□ -0.84
CPNE1-201ENST00000317677 LEPP41159 167 aa9.83□□□□□ -0.84
CPNE1-201ENST00000317677 PSMB2P49721 201 aa9.83□□□□□ -0.84
CPNE1-201ENST00000317677 LYZL1Q6UWQ5 148 aa9.83□□□□□ -0.84
CPNE1-201ENST00000317677 ATRQ13535 2644 aa9.83□□□□□ -0.84
CPNE1-201ENST00000317677 PLNP26678 52 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 111.1 ms