RNA–Protein interactions for RNA: ENST00000310645.9

COL6A2-202, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-202ENST00000310645 IGIPA6NJ69 53 aa11.06□□□□□ -0.64
COL6A2-202ENST00000310645 TMEM262E9PQX1 116 aa11.06□□□□□ -0.64
COL6A2-202ENST00000310645 GAGE2BQ13066 116 aa11.06□□□□□ -0.64
COL6A2-202ENST00000310645 GAGE2EQ4V326 116 aa11.06□□□□□ -0.64
COL6A2-202ENST00000310645 PAPPA-AS1Q5QFB9 102 aa11.06□□□□□ -0.64
COL6A2-202ENST00000310645 GAGE2DQ9UEU5 116 aa11.06□□□□□ -0.64
COL6A2-202ENST00000310645 SDHAF1A6NFY7 115 aa11.05□□□□□ -0.64
COL6A2-202ENST00000310645 SNCGO76070 127 aa11.05□□□□□ -0.64
COL6A2-202ENST00000310645 SAA4P35542 130 aa11.05□□□□□ -0.64
COL6A2-202ENST00000310645 MINOS1Q5TGZ0 78 aa11.05□□□□□ -0.64
COL6A2-202ENST00000310645 VCX2Q9H322 139 aa11.05□□□□□ -0.64
COL6A2-202ENST00000310645 MINOS1-NBL1R4GNA1 71 aa11.05□□□□□ -0.64
COL6A2-202ENST00000310645 CREBBPQ92793 2442 aa11.05□□□□□ -0.64
COL6A2-202ENST00000310645 TRBV7-1A0A0A6YYK4 115 aa11.05□□□□□ -0.64
COL6A2-202ENST00000310645 GAGE5Q13069 117 aa11.05□□□□□ -0.64
COL6A2-202ENST00000310645 GAGE6Q13070 117 aa11.05□□□□□ -0.64
COL6A2-202ENST00000310645 AJUBAQ96IF1 538 aa11.05□□□□□ -0.64
COL6A2-202ENST00000310645 TRAV4A0A0B4J268 109 aa11.05□□□□□ -0.64
COL6A2-202ENST00000310645 ADARB2-AS1A8MUL3 147 aa11.05□□□□□ -0.64
COL6A2-202ENST00000310645 CRLF1O75462 422 aa11.05□□□□□ -0.64
COL6A2-202ENST00000310645 SUMO4Q6EEV6 95 aa11.05□□□□□ -0.64
COL6A2-202ENST00000310645 OOSP1A8MZH6 123 aa11.04□□□□□ -0.64
COL6A2-202ENST00000310645 TCF15Q12870 199 aa11.04□□□□□ -0.64
COL6A2-202ENST00000310645 ITLN2Q8WWU7 325 aaPredicted RBP11.04□□□□□ -0.64
COL6A2-202ENST00000310645 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.04□□□□□ -0.64
COL6A2-202ENST00000310645 ZNF292O60281 2723 aa11.04□□□□□ -0.64
COL6A2-202ENST00000310645 PPP1R17O96001 155 aa11.04□□□□□ -0.64
COL6A2-202ENST00000310645 MUSTN1Q8IVN3 82 aa11.04□□□□□ -0.64
COL6A2-202ENST00000310645 IGF2RP11717 2491 aa11.03□□□□□ -0.64
COL6A2-202ENST00000310645 ELANEP08246 267 aa11.03□□□□□ -0.64
COL6A2-202ENST00000310645 U3KQE9 123 aa11.03□□□□□ -0.64
COL6A2-202ENST00000310645 CENPVL3A0A0U1RRI6 287 aa11.03□□□□□ -0.64
COL6A2-202ENST00000310645 VCYO14598 125 aa11.03□□□□□ -0.64
COL6A2-202ENST00000310645 SBSPONQ8IVN8 264 aa11.03□□□□□ -0.64
COL6A2-202ENST00000310645 HRNRQ86YZ3 2850 aaPredicted RBP11.03□□□□□ -0.64
COL6A2-202ENST00000310645 PTPRQQ9UMZ3 2332 aa11.03□□□□□ -0.64
COL6A2-202ENST00000310645 OVOL1O14753 267 aa11.03□□□□□ -0.64
COL6A2-202ENST00000310645 PRSS2P07478 247 aa11.03□□□□□ -0.64
COL6A2-202ENST00000310645 LENEPQ9Y5L5 61 aa11.03□□□□□ -0.64
COL6A2-202ENST00000310645 EIF4EBP3O60516 100 aaPredicted RBP11.02□□□□□ -0.64
COL6A2-202ENST00000310645 IGHV3-33P01772 117 aa11.02□□□□□ -0.64
COL6A2-202ENST00000310645 TTC32Q5I0X7 151 aa11.02□□□□□ -0.64
COL6A2-202ENST00000310645 FAM159AQ6UWV7 190 aa11.02□□□□□ -0.64
COL6A2-202ENST00000310645 ZNF580Q9UK33 172 aa11.02□□□□□ -0.64
COL6A2-202ENST00000310645 TEX49A0A1B0GTD5 131 aa11.02□□□□□ -0.65
COL6A2-202ENST00000310645 CCL21O00585 134 aa11.02□□□□□ -0.65
COL6A2-202ENST00000310645 IGKV3-20P01619 116 aa11.02□□□□□ -0.65
COL6A2-202ENST00000310645 Q8N1Y9 231 aa11.02□□□□□ -0.65
COL6A2-202ENST00000310645 MAP1AP78559 2803 aaPredicted RBP11.02□□□□□ -0.65
COL6A2-202ENST00000310645 IGHV1-69DA0A0B4J2H0 117 aa11.02□□□□□ -0.65
COL6A2-202ENST00000310645 CDSNQ15517 529 aa11.02□□□□□ -0.65
COL6A2-202ENST00000310645 TRAV12-3A0A0B4J271 114 aa11.01□□□□□ -0.65
COL6A2-202ENST00000310645 POLR2KP53803 58 aaKnown RBP11.01□□□□□ -0.65
COL6A2-202ENST00000310645 LINC00315P59091 139 aa11.01□□□□□ -0.65
COL6A2-202ENST00000310645 ZNF56Q15929 161 aa11.01□□□□□ -0.65
COL6A2-202ENST00000310645 NHLRC4P0CG21 123 aaPredicted RBP11□□□□□ -0.65
COL6A2-202ENST00000310645 NPC2P61916 151 aa11□□□□□ -0.65
COL6A2-202ENST00000310645 IGF2-ASQ6U949 168 aa11□□□□□ -0.65
COL6A2-202ENST00000310645 TMEM141Q96I45 108 aa11□□□□□ -0.65
COL6A2-202ENST00000310645 AMELXQ99217 191 aa11□□□□□ -0.65
COL6A2-202ENST00000310645 CELSR1Q9NYQ6 3014 aa11□□□□□ -0.65
COL6A2-202ENST00000310645 TRAV41A0A0B4J266 112 aa11□□□□□ -0.65
COL6A2-202ENST00000310645 ZNF876PQ49A33 203 aa11□□□□□ -0.65
COL6A2-202ENST00000310645 SPTBN4Q9H254 2564 aa11□□□□□ -0.65
COL6A2-202ENST00000310645 CITED1Q99966 193 aa11□□□□□ -0.65
COL6A2-202ENST00000310645 SIRPDQ9H106 197 aa11□□□□□ -0.65
COL6A2-202ENST00000310645 UBTD1Q9HAC8 227 aa11□□□□□ -0.65
COL6A2-202ENST00000310645 CCDC179H3BU77 68 aa10.99□□□□□ -0.65
COL6A2-202ENST00000310645 TMEM263Q8WUH6 116 aaKnown RBP10.99□□□□□ -0.65
COL6A2-202ENST00000310645 KIF25-AS1Q9Y6Z4 181 aa10.99□□□□□ -0.65
COL6A2-202ENST00000310645 A0A0J9YXV3 536 aa10.99□□□□□ -0.65
COL6A2-202ENST00000310645 NDUFV3P56181 108 aaKnown RBP10.99□□□□□ -0.65
COL6A2-202ENST00000310645 LINC01620Q4KN68 170 aa10.99□□□□□ -0.65
COL6A2-202ENST00000310645 TIMM17AQ99595 171 aa10.99□□□□□ -0.65
COL6A2-202ENST00000310645 ZFHX3Q15911 3703 aa10.98□□□□□ -0.65
COL6A2-202ENST00000310645 SPXQ9BT56 116 aa10.98□□□□□ -0.65
COL6A2-202ENST00000310645 RHODO00212 210 aa10.98□□□□□ -0.65
COL6A2-202ENST00000310645 SPG11Q96JI7 2443 aa10.97□□□□□ -0.65
COL6A2-202ENST00000310645 TRAV8-4A0A0B4J246 113 aa10.97□□□□□ -0.65
COL6A2-202ENST00000310645 UBE2E1P51965 193 aa10.97□□□□□ -0.65
COL6A2-202ENST00000310645 ATXN8Q156A1 80 aa10.97□□□□□ -0.65
COL6A2-202ENST00000310645 IGHV4OR15-8A0A075B7B6 117 aa10.97□□□□□ -0.65
COL6A2-202ENST00000310645 A0A087WW49 117 aa10.97□□□□□ -0.65
COL6A2-202ENST00000310645 C15orf53Q8NAA6 179 aa10.97□□□□□ -0.65
COL6A2-202ENST00000310645 PRRC2AP48634 2157 aaKnown RBP10.97□□□□□ -0.65
COL6A2-202ENST00000310645 DOPEY2Q9Y3R5 2298 aa10.97□□□□□ -0.65
COL6A2-202ENST00000310645 C5orf56Q8N8D9 126 aa10.97□□□□□ -0.65
COL6A2-202ENST00000310645 RHPN1-AS1Q9BWJ2 59 aa10.97□□□□□ -0.65
COL6A2-202ENST00000310645 NCOR2Q9Y618 2525 aa10.97□□□□□ -0.65
COL6A2-202ENST00000310645 COL12A1Q99715 3063 aa10.97□□□□□ -0.65
COL6A2-202ENST00000310645 TRAV12-2A0A075B6T6 113 aa10.96□□□□□ -0.65
COL6A2-202ENST00000310645 EDN2P20800 178 aa10.96□□□□□ -0.65
COL6A2-202ENST00000310645 CHD8Q9HCK8 2581 aa10.96□□□□□ -0.65
COL6A2-202ENST00000310645 GAGE12JA6NER3 117 aa10.96□□□□□ -0.66
COL6A2-202ENST00000310645 LEPROTO15243 131 aa10.96□□□□□ -0.66
COL6A2-202ENST00000310645 GAGE7O76087 117 aa10.96□□□□□ -0.66
COL6A2-202ENST00000310645 GAGE12FP0CL80 117 aa10.96□□□□□ -0.66
COL6A2-202ENST00000310645 GAGE12GP0CL81 117 aa10.96□□□□□ -0.66
COL6A2-202ENST00000310645 GAGE12IP0CL82 117 aa10.96□□□□□ -0.66
COL6A2-202ENST00000310645 IFITM1P13164 125 aa10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms