RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 NAT8BQ9UHF3 227 aa12.55□□□□□ -0.4
SSSCA1-201ENST00000309328 APLNQ9ULZ1 77 aa12.55□□□□□ -0.4
SSSCA1-201ENST00000309328 A0A1B0GUT8 65 aa12.53□□□□□ -0.4
SSSCA1-201ENST00000309328 P0DMU3 169 aa12.53□□□□□ -0.4
SSSCA1-201ENST00000309328 FAM231AP0DMU4 169 aa12.53□□□□□ -0.4
SSSCA1-201ENST00000309328 FAM231CP0DMU5 169 aa12.53□□□□□ -0.4
SSSCA1-201ENST00000309328 NTF3P20783 257 aa12.53□□□□□ -0.4
SSSCA1-201ENST00000309328 NDUFA5Q16718 116 aa12.53□□□□□ -0.4
SSSCA1-201ENST00000309328 C10orf91Q5T1B1 145 aa12.53□□□□□ -0.4
SSSCA1-201ENST00000309328 UFSP1Q6NVU6 142 aa12.53□□□□□ -0.4
SSSCA1-201ENST00000309328 ICOSQ9Y6W8 199 aa12.53□□□□□ -0.4
SSSCA1-201ENST00000309328 SMIM27A0A1W2PRY6 76 aa12.52□□□□□ -0.41
SSSCA1-201ENST00000309328 CRYGDP07320 174 aa12.52□□□□□ -0.41
SSSCA1-201ENST00000309328 ADCYAP1P18509 176 aa12.52□□□□□ -0.41
SSSCA1-201ENST00000309328 RAB4BP61018 213 aa12.52□□□□□ -0.41
SSSCA1-201ENST00000309328 TWIST1Q15672 202 aa12.52□□□□□ -0.41
SSSCA1-201ENST00000309328 MRPL23Q16540 153 aaKnown RBP12.52□□□□□ -0.41
SSSCA1-201ENST00000309328 FAM74A4Q5TZK3 123 aa12.52□□□□□ -0.41
SSSCA1-201ENST00000309328 CARHSP1Q9Y2V2 147 aaKnown RBP12.52□□□□□ -0.41
SSSCA1-201ENST00000309328 A0A0J9YY99 117 aa12.51□□□□□ -0.41
SSSCA1-201ENST00000309328 A0A1B0GW15 77 aa12.51□□□□□ -0.41
SSSCA1-201ENST00000309328 NUDT3O95989 172 aa12.51□□□□□ -0.41
SSSCA1-201ENST00000309328 PLECQ15149 4684 aaKnown RBP12.51□□□□□ -0.41
SSSCA1-201ENST00000309328 RNF212Q495C1 297 aa12.51□□□□□ -0.41
SSSCA1-201ENST00000309328 LGALS9CQ6DKI2 356 aa12.51□□□□□ -0.41
SSSCA1-201ENST00000309328 SLC25A29Q8N8R3 303 aa12.51□□□□□ -0.41
SSSCA1-201ENST00000309328 VSIG2Q96IQ7 327 aa12.51□□□□□ -0.41
SSSCA1-201ENST00000309328 PGLYRP4Q96LB8 373 aa12.51□□□□□ -0.41
SSSCA1-201ENST00000309328 CTDSP1Q9GZU7 261 aa12.51□□□□□ -0.41
SSSCA1-201ENST00000309328 TENM2Q9NT68 2774 aa12.51□□□□□ -0.41
SSSCA1-201ENST00000309328 A0A087WWL8 130 aa12.5□□□□□ -0.41
SSSCA1-201ENST00000309328 MUC21A0A0G2JKD1 596 aa12.5□□□□□ -0.41
SSSCA1-201ENST00000309328 TRBV10-1A0A0K0K1A3 114 aa12.5□□□□□ -0.41
SSSCA1-201ENST00000309328 MUC21A0A140T8X8 626 aa12.5□□□□□ -0.41
SSSCA1-201ENST00000309328 K7EQD1 137 aa12.5□□□□□ -0.41
SSSCA1-201ENST00000309328 RIGQ13278 110 aa12.5□□□□□ -0.41
SSSCA1-201ENST00000309328 SAMD10Q9BYL1 202 aa12.5□□□□□ -0.41
SSSCA1-201ENST00000309328 JPT2Q9H910 190 aa12.5□□□□□ -0.41
SSSCA1-201ENST00000309328 H7C1H1 209 aa12.49□□□□□ -0.41
SSSCA1-201ENST00000309328 S100A8P05109 93 aa12.49□□□□□ -0.41
SSSCA1-201ENST00000309328 SRIP30626 198 aa12.49□□□□□ -0.41
SSSCA1-201ENST00000309328 FAM3BP58499 235 aaPredicted RBP12.49□□□□□ -0.41
SSSCA1-201ENST00000309328 C14orf178Q8N769 122 aaPredicted RBP12.49□□□□□ -0.41
SSSCA1-201ENST00000309328 NUP35Q8NFH5 326 aa12.49□□□□□ -0.41
SSSCA1-201ENST00000309328 DPH3P1Q9H4G8 78 aa12.49□□□□□ -0.41
SSSCA1-201ENST00000309328 IGHV3-73A0A0B4J1V6 119 aa12.48□□□□□ -0.41
SSSCA1-201ENST00000309328 GYPEP15421 78 aa12.48□□□□□ -0.41
SSSCA1-201ENST00000309328 CCL18P55774 89 aa12.48□□□□□ -0.41
SSSCA1-201ENST00000309328 SSTP61278 116 aa12.48□□□□□ -0.41
SSSCA1-201ENST00000309328 RHEBQ15382 184 aa12.48□□□□□ -0.41
SSSCA1-201ENST00000309328 ZNF56Q15929 161 aa12.48□□□□□ -0.41
SSSCA1-201ENST00000309328 FRZBQ92765 325 aa12.48□□□□□ -0.41
SSSCA1-201ENST00000309328 IMMP2LQ96T52 175 aa12.48□□□□□ -0.41
SSSCA1-201ENST00000309328 NEGR1Q7Z3B1 354 aa12.47□□□□□ -0.41
SSSCA1-201ENST00000309328 LINC00476Q8WZB0 136 aa12.47□□□□□ -0.41
SSSCA1-201ENST00000309328 TMEM242Q9NWH2 141 aa12.47□□□□□ -0.41
SSSCA1-201ENST00000309328 MSRB1Q9NZV6 116 aa12.47□□□□□ -0.41
SSSCA1-201ENST00000309328 KIF25-AS1Q9Y6Z4 181 aa12.47□□□□□ -0.41
SSSCA1-201ENST00000309328 A0A096LPF7 62 aa12.46□□□□□ -0.41
SSSCA1-201ENST00000309328 F5H697 171 aa12.46□□□□□ -0.41
SSSCA1-201ENST00000309328 ATP5L2Q7Z4Y8 100 aa12.46□□□□□ -0.41
SSSCA1-201ENST00000309328 SVBPQ8N300 66 aa12.46□□□□□ -0.41
SSSCA1-201ENST00000309328 A0A087WWC5 75 aa12.45□□□□□ -0.42
SSSCA1-201ENST00000309328 EVI2AP22794 236 aa12.45□□□□□ -0.42
SSSCA1-201ENST00000309328 TMEM191AQ9H0A3 160 aa12.45□□□□□ -0.42
SSSCA1-201ENST00000309328 LCE6AA0A183 80 aa12.44□□□□□ -0.42
SSSCA1-201ENST00000309328 SNAPINO95295 136 aa12.44□□□□□ -0.42
SSSCA1-201ENST00000309328 TIRAPP58753 221 aa12.44□□□□□ -0.42
SSSCA1-201ENST00000309328 RPL36AP83881 106 aaKnown RBP12.44□□□□□ -0.42
SSSCA1-201ENST00000309328 KCNIP4Q6PIL6 250 aa12.44□□□□□ -0.42
SSSCA1-201ENST00000309328 UBE2DNLQ8IWF7 75 aa12.44□□□□□ -0.42
SSSCA1-201ENST00000309328 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.44□□□□□ -0.42
SSSCA1-201ENST00000309328 RPL36ALQ969Q0 106 aaKnown RBP12.44□□□□□ -0.42
SSSCA1-201ENST00000309328 TRAV9-1A0A075B6T8 112 aa12.43□□□□□ -0.42
SSSCA1-201ENST00000309328 MGPP08493 103 aa12.43□□□□□ -0.42
SSSCA1-201ENST00000309328 LINC00315P59091 139 aa12.43□□□□□ -0.42
SSSCA1-201ENST00000309328 APOC3P02656 99 aa12.42□□□□□ -0.42
SSSCA1-201ENST00000309328 HBBP68871 147 aa12.42□□□□□ -0.42
SSSCA1-201ENST00000309328 Q6ZSN1 163 aa12.42□□□□□ -0.42
SSSCA1-201ENST00000309328 CLRN3Q8NCR9 226 aa12.42□□□□□ -0.42
SSSCA1-201ENST00000309328 DNAJC30Q96LL9 226 aa12.42□□□□□ -0.42
SSSCA1-201ENST00000309328 TRBV7-3A0A075B6L6 115 aa12.41□□□□□ -0.42
SSSCA1-201ENST00000309328 LY6G6CO95867 125 aa12.41□□□□□ -0.42
SSSCA1-201ENST00000309328 S100PP25815 95 aa12.41□□□□□ -0.42
SSSCA1-201ENST00000309328 BTF3L4Q96K17 158 aa12.41□□□□□ -0.42
SSSCA1-201ENST00000309328 C7orf77A4D0Y5 90 aa12.4□□□□□ -0.42
SSSCA1-201ENST00000309328 LINC00694P0DN24 101 aa12.4□□□□□ -0.42
SSSCA1-201ENST00000309328 RASL11AQ6T310 242 aa12.4□□□□□ -0.42
SSSCA1-201ENST00000309328 ATP6V0E2Q8NHE4 81 aa12.4□□□□□ -0.42
SSSCA1-201ENST00000309328 UPK3BQ9BT76 320 aa12.4□□□□□ -0.42
SSSCA1-201ENST00000309328 NACAE9PAV3 2078 aa12.39□□□□□ -0.43
SSSCA1-201ENST00000309328 M0QY20 66 aa12.39□□□□□ -0.43
SSSCA1-201ENST00000309328 PPP1R17O96001 155 aa12.39□□□□□ -0.43
SSSCA1-201ENST00000309328 SUMO4Q6EEV6 95 aa12.39□□□□□ -0.43
SSSCA1-201ENST00000309328 MRAP2Q96G30 205 aa12.39□□□□□ -0.43
SSSCA1-201ENST00000309328 GTSF1LQ9H1H1 148 aa12.39□□□□□ -0.43
SSSCA1-201ENST00000309328 MRPS16Q9Y3D3 137 aaKnown RBP12.39□□□□□ -0.43
SSSCA1-201ENST00000309328 ALMS1Q8TCU4 4167 aa12.39□□□□□ -0.43
SSSCA1-201ENST00000309328 LYSTQ99698 3801 aa12.39□□□□□ -0.43
SSSCA1-201ENST00000309328 LOC100131303A0A0U1RQF7 123 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms