RNA–Protein interactions for RNA: ENST00000307522.3

CCDC8-201, Transcript of coiled-coil domain containing 8, humanhuman

APPRIS P1 BASIC

Gene CCDC8, Length 3,213 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC8-201ENST00000307522 NRACQ8N912 160 aa12.39□□□□□ -0.43
CCDC8-201ENST00000307522 C15orf53Q8NAA6 179 aa12.39□□□□□ -0.43
CCDC8-201ENST00000307522 SORL1Q92673 2214 aa12.38□□□□□ -0.43
CCDC8-201ENST00000307522 UBE2D1P51668 147 aa12.38□□□□□ -0.43
CCDC8-201ENST00000307522 FBXL19-AS1Q494R0 122 aa12.38□□□□□ -0.43
CCDC8-201ENST00000307522 BBC3Q96PG8 261 aaPredicted RBP12.38□□□□□ -0.43
CCDC8-201ENST00000307522 MGPP08493 103 aa12.37□□□□□ -0.43
CCDC8-201ENST00000307522 PRRC2AP48634 2157 aaKnown RBP12.37□□□□□ -0.43
CCDC8-201ENST00000307522 DEFB1P60022 68 aa12.37□□□□□ -0.43
CCDC8-201ENST00000307522 MRPL23Q16540 153 aaKnown RBP12.37□□□□□ -0.43
CCDC8-201ENST00000307522 IGHG4P01861 327 aa12.37□□□□□ -0.43
CCDC8-201ENST00000307522 TSPEAR-AS2P59090 65 aa12.37□□□□□ -0.43
CCDC8-201ENST00000307522 C14orf178Q8N769 122 aaPredicted RBP12.37□□□□□ -0.43
CCDC8-201ENST00000307522 C11orf71Q6IPW1 123 aa12.36□□□□□ -0.43
CCDC8-201ENST00000307522 Q8N1Y9 231 aa12.36□□□□□ -0.43
CCDC8-201ENST00000307522 ITPR2Q14571 2701 aa12.35□□□□□ -0.43
CCDC8-201ENST00000307522 TRBV6-1A0A0K0K1D8 114 aa12.35□□□□□ -0.43
CCDC8-201ENST00000307522 TMEM170BQ5T4T1 132 aa12.35□□□□□ -0.43
CCDC8-201ENST00000307522 BAALCQ8WXS3 180 aa12.35□□□□□ -0.43
CCDC8-201ENST00000307522 DPM3Q9P2X0 92 aa12.35□□□□□ -0.43
CCDC8-201ENST00000307522 SMAD5-AS1Q9Y6J3 95 aa12.35□□□□□ -0.43
CCDC8-201ENST00000307522 ZNF469Q96JG9 3925 aaPredicted RBP12.35□□□□□ -0.43
CCDC8-201ENST00000307522 IGF1P05019 195 aa12.35□□□□□ -0.43
CCDC8-201ENST00000307522 ATP5J2P56134 94 aa12.35□□□□□ -0.43
CCDC8-201ENST00000307522 C11orf86A6NJI1 115 aa12.34□□□□□ -0.43
CCDC8-201ENST00000307522 M0QXV9 152 aa12.34□□□□□ -0.43
CCDC8-201ENST00000307522 DUSP14O95147 198 aaKnown RBP12.34□□□□□ -0.43
CCDC8-201ENST00000307522 SRD5A1P18405 259 aa12.34□□□□□ -0.43
CCDC8-201ENST00000307522 NDPQ00604 133 aa12.34□□□□□ -0.43
CCDC8-201ENST00000307522 TRAV2A0A0B4J234 112 aa12.34□□□□□ -0.43
CCDC8-201ENST00000307522 NPC2P61916 151 aa12.34□□□□□ -0.43
CCDC8-201ENST00000307522 ECSCRQ19T08 205 aa12.34□□□□□ -0.43
CCDC8-201ENST00000307522 C2orf66Q6UXQ4 117 aa12.34□□□□□ -0.43
CCDC8-201ENST00000307522 ADARB2-AS1A8MUL3 147 aa12.33□□□□□ -0.43
CCDC8-201ENST00000307522 LY6EQ16553 131 aa12.33□□□□□ -0.43
CCDC8-201ENST00000307522 TMEM95Q3KNT9 176 aa12.33□□□□□ -0.43
CCDC8-201ENST00000307522 HIST2H2BCQ6DN03 193 aa12.33□□□□□ -0.43
CCDC8-201ENST00000307522 LOC107984640A0A0U1RRK4 108 aa12.33□□□□□ -0.44
CCDC8-201ENST00000307522 LYPD1Q8N2G4 141 aa12.33□□□□□ -0.44
CCDC8-201ENST00000307522 TENM4Q6N022 2769 aa12.32□□□□□ -0.44
CCDC8-201ENST00000307522 A0A0J9YY99 117 aa12.32□□□□□ -0.44
CCDC8-201ENST00000307522 A4D1N5 150 aa12.32□□□□□ -0.44
CCDC8-201ENST00000307522 RPL39P62891 51 aaKnown RBP12.32□□□□□ -0.44
CCDC8-201ENST00000307522 NEXN-AS1Q8NBZ9 246 aa12.32□□□□□ -0.44
CCDC8-201ENST00000307522 DUX3Q96PT4 197 aa12.32□□□□□ -0.44
CCDC8-201ENST00000307522 SMIM2Q9BVW6 85 aa12.32□□□□□ -0.44
CCDC8-201ENST00000307522 TMEM262E9PQX1 116 aa12.32□□□□□ -0.44
CCDC8-201ENST00000307522 EIF4EBP3O60516 100 aaPredicted RBP12.32□□□□□ -0.44
CCDC8-201ENST00000307522 ZNF56Q15929 161 aa12.32□□□□□ -0.44
CCDC8-201ENST00000307522 C10orf126Q8N4M7 172 aa12.32□□□□□ -0.44
CCDC8-201ENST00000307522 ODF3Q96PU9 254 aa12.32□□□□□ -0.44
CCDC8-201ENST00000307522 Q6ZSV7 163 aa12.32□□□□□ -0.44
CCDC8-201ENST00000307522 APCP25054 2843 aa12.31□□□□□ -0.44
CCDC8-201ENST00000307522 TRAV8-4A0A0B4J246 113 aa12.31□□□□□ -0.44
CCDC8-201ENST00000307522 PRO1854Q9UHT4 67 aa12.31□□□□□ -0.44
CCDC8-201ENST00000307522 VPREB3Q9UKI3 123 aa12.31□□□□□ -0.44
CCDC8-201ENST00000307522 G3V318 75 aa12.3□□□□□ -0.44
CCDC8-201ENST00000307522 LINC00311Q8N616 119 aa12.3□□□□□ -0.44
CCDC8-201ENST00000307522 OPRPNQ99935 248 aaPredicted RBP12.3□□□□□ -0.44
CCDC8-201ENST00000307522 VCX2Q9H322 139 aa12.3□□□□□ -0.44
CCDC8-201ENST00000307522 KLK5Q9Y337 293 aaPredicted RBP12.3□□□□□ -0.44
CCDC8-201ENST00000307522 TNFRSF18Q9Y5U5 241 aa12.3□□□□□ -0.44
CCDC8-201ENST00000307522 IGHV4-61A0A0C4DH41 118 aa12.3□□□□□ -0.44
CCDC8-201ENST00000307522 SAA4P35542 130 aa12.3□□□□□ -0.44
CCDC8-201ENST00000307522 ZNF580Q9UK33 172 aa12.3□□□□□ -0.44
CCDC8-201ENST00000307522 FLNAP21333 2647 aaKnown RBP12.29□□□□□ -0.44
CCDC8-201ENST00000307522 CRYGBP07316 175 aa12.29□□□□□ -0.44
CCDC8-201ENST00000307522 COX6B1P14854 86 aa12.29□□□□□ -0.44
CCDC8-201ENST00000307522 PSMG4Q5JS54 123 aa12.29□□□□□ -0.44
CCDC8-201ENST00000307522 AGPAT4-IT1Q9H0P7 198 aa12.29□□□□□ -0.44
CCDC8-201ENST00000307522 YAE1D1Q9NRH1 226 aa12.29□□□□□ -0.44
CCDC8-201ENST00000307522 LINC01546A6NGU7 62 aa12.29□□□□□ -0.44
CCDC8-201ENST00000307522 PVRIGQ6DKI7 326 aa12.29□□□□□ -0.44
CCDC8-201ENST00000307522 NBR2O15453 112 aa12.28□□□□□ -0.44
CCDC8-201ENST00000307522 IGHV3-30P01768 117 aa12.28□□□□□ -0.44
CCDC8-201ENST00000307522 IGHV3-30-5P0DP03 117 aa12.28□□□□□ -0.44
CCDC8-201ENST00000307522 HIST2H2BDQ6DRA6 164 aa12.28□□□□□ -0.44
CCDC8-201ENST00000307522 IGHV7-4-1A0A0J9YVY3 117 aa12.28□□□□□ -0.44
CCDC8-201ENST00000307522 NIPBLQ6KC79 2804 aaeCLIP12.28□□□□□ -0.44
CCDC8-201ENST00000307522 SUMO2P61956 95 aaKnown RBP12.28□□□□□ -0.44
CCDC8-201ENST00000307522 LYRM7Q5U5X0 104 aa12.28□□□□□ -0.44
CCDC8-201ENST00000307522 CCL19Q99731 98 aa12.28□□□□□ -0.44
CCDC8-201ENST00000307522 IGKV3-7A0A075B6H7 116 aa12.27□□□□□ -0.44
CCDC8-201ENST00000307522 IGHV4-30-2A0A087WSY4 118 aa12.27□□□□□ -0.45
CCDC8-201ENST00000307522 PRR9Q5T870 116 aa12.26□□□□□ -0.45
CCDC8-201ENST00000307522 C21orf62Q9NYP8 219 aa12.26□□□□□ -0.45
CCDC8-201ENST00000307522 ITPR3Q14573 2671 aa12.26□□□□□ -0.45
CCDC8-201ENST00000307522 LY6LH3BQJ8 138 aa12.26□□□□□ -0.45
CCDC8-201ENST00000307522 CRYGDP07320 174 aa12.26□□□□□ -0.45
CCDC8-201ENST00000307522 HERVK_113P61574 105 aa12.26□□□□□ -0.45
CCDC8-201ENST00000307522 F8W735 103 aaPredicted RBP12.26□□□□□ -0.45
CCDC8-201ENST00000307522 PDE6HQ13956 83 aa12.26□□□□□ -0.45
CCDC8-201ENST00000307522 CEMP1Q6PRD7 247 aaPredicted RBP12.26□□□□□ -0.45
CCDC8-201ENST00000307522 LY6G5BQ8NDX9 201 aa12.26□□□□□ -0.45
CCDC8-201ENST00000307522 CNFNQ9BYD5 112 aa12.26□□□□□ -0.45
CCDC8-201ENST00000307522 TP53TG1Q9Y2A0 90 aa12.26□□□□□ -0.45
CCDC8-201ENST00000307522 OOSP1A8MZH6 123 aa12.25□□□□□ -0.45
CCDC8-201ENST00000307522 LMO4P61968 165 aa12.25□□□□□ -0.45
CCDC8-201ENST00000307522 PSMG3-AS1Q96PY0 264 aa12.25□□□□□ -0.45
CCDC8-201ENST00000307522 PRSS2P07478 247 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms