RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 CRYBA4P53673 196 aa17.14■□□□□ 0.33
HOXC9-201ENST00000303450 RNF212Q495C1 297 aa17.14■□□□□ 0.33
HOXC9-201ENST00000303450 C15orf53Q8NAA6 179 aa17.14■□□□□ 0.33
HOXC9-201ENST00000303450 AP1S3Q96PC3 154 aa17.14■□□□□ 0.33
HOXC9-201ENST00000303450 CNFNQ9BYD5 112 aa17.14■□□□□ 0.33
HOXC9-201ENST00000303450 MSRB1Q9NZV6 116 aa17.14■□□□□ 0.33
HOXC9-201ENST00000303450 CRYGDP07320 174 aa17.13■□□□□ 0.33
HOXC9-201ENST00000303450 TWIST1Q15672 202 aa17.13■□□□□ 0.33
HOXC9-201ENST00000303450 BORCS7Q96B45 105 aa17.13■□□□□ 0.33
HOXC9-201ENST00000303450 VSIG2Q96IQ7 327 aa17.13■□□□□ 0.33
HOXC9-201ENST00000303450 NUDT3O95989 172 aa17.12■□□□□ 0.33
HOXC9-201ENST00000303450 SMIM17P0DL12 118 aa17.12■□□□□ 0.33
HOXC9-201ENST00000303450 GATA1P15976 413 aaPredicted RBP17.12■□□□□ 0.33
HOXC9-201ENST00000303450 C10orf91Q5T1B1 145 aa17.12■□□□□ 0.33
HOXC9-201ENST00000303450 UFSP1Q6NVU6 142 aa17.12■□□□□ 0.33
HOXC9-201ENST00000303450 ANAPC16Q96DE5 110 aa17.12■□□□□ 0.33
HOXC9-201ENST00000303450 H3BNG1 76 aa17.11■□□□□ 0.33
HOXC9-201ENST00000303450 C14orf178Q8N769 122 aaPredicted RBP17.11■□□□□ 0.33
HOXC9-201ENST00000303450 NAT8BQ9UHF3 227 aa17.11■□□□□ 0.33
HOXC9-201ENST00000303450 SMIM27A0A1W2PRY6 76 aa17.11■□□□□ 0.33
HOXC9-201ENST00000303450 TRGC1P0CF51 173 aa17.11■□□□□ 0.33
HOXC9-201ENST00000303450 CARHSP1Q9Y2V2 147 aaKnown RBP17.11■□□□□ 0.33
HOXC9-201ENST00000303450 PLECQ15149 4684 aaKnown RBP17.1■□□□□ 0.33
HOXC9-201ENST00000303450 NUP35Q8NFH5 326 aa17.1■□□□□ 0.33
HOXC9-201ENST00000303450 A0A1B0GUT8 65 aa17.09■□□□□ 0.33
HOXC9-201ENST00000303450 SLC25A29Q8N8R3 303 aa17.09■□□□□ 0.33
HOXC9-201ENST00000303450 TRBV6-4A0A1B0GX49 114 aa17.08■□□□□ 0.32
HOXC9-201ENST00000303450 EVI2AP22794 236 aa17.07■□□□□ 0.32
HOXC9-201ENST00000303450 Q6ZSN1 163 aa17.07■□□□□ 0.32
HOXC9-201ENST00000303450 SLC7A5P1Q8MH63 180 aa17.07■□□□□ 0.32
HOXC9-201ENST00000303450 PRADC1Q9BSG0 188 aa17.07■□□□□ 0.32
HOXC9-201ENST00000303450 GYPEP15421 78 aa17.06■□□□□ 0.32
HOXC9-201ENST00000303450 RHOHQ15669 191 aa17.06■□□□□ 0.32
HOXC9-201ENST00000303450 ZNF56Q15929 161 aa17.06■□□□□ 0.32
HOXC9-201ENST00000303450 SMIM15Q7Z3B0 74 aa17.06■□□□□ 0.32
HOXC9-201ENST00000303450 ICOSQ9Y6W8 199 aa17.06■□□□□ 0.32
HOXC9-201ENST00000303450 KIF25-AS1Q9Y6Z4 181 aa17.06■□□□□ 0.32
HOXC9-201ENST00000303450 NDUFA5Q16718 116 aa17.06■□□□□ 0.32
HOXC9-201ENST00000303450 F5H697 171 aa17.05■□□□□ 0.32
HOXC9-201ENST00000303450 K7EQD1 137 aa17.05■□□□□ 0.32
HOXC9-201ENST00000303450 RAB4BP61018 213 aa17.05■□□□□ 0.32
HOXC9-201ENST00000303450 RIGQ13278 110 aa17.05■□□□□ 0.32
HOXC9-201ENST00000303450 DPH3P1Q9H4G8 78 aa17.05■□□□□ 0.32
HOXC9-201ENST00000303450 APOC3P02656 99 aa17.04■□□□□ 0.32
HOXC9-201ENST00000303450 MGPP08493 103 aa17.04■□□□□ 0.32
HOXC9-201ENST00000303450 MRPL23Q16540 153 aaKnown RBP17.04■□□□□ 0.32
HOXC9-201ENST00000303450 A0A096LPF7 62 aa17.03■□□□□ 0.32
HOXC9-201ENST00000303450 LOC100131303A0A0U1RQF7 123 aa17.03■□□□□ 0.32
HOXC9-201ENST00000303450 CTDSP1Q9GZU7 261 aa17.03■□□□□ 0.32
HOXC9-201ENST00000303450 CLRN3Q8NCR9 226 aa17.02■□□□□ 0.32
HOXC9-201ENST00000303450 SRIP30626 198 aa17.01■□□□□ 0.31
HOXC9-201ENST00000303450 LINC00315P59091 139 aa17.01■□□□□ 0.31
HOXC9-201ENST00000303450 C7orf77A4D0Y5 90 aa17.01■□□□□ 0.31
HOXC9-201ENST00000303450 P0DMU3 169 aa17.01■□□□□ 0.31
HOXC9-201ENST00000303450 FAM231AP0DMU4 169 aa17.01■□□□□ 0.31
HOXC9-201ENST00000303450 FAM231CP0DMU5 169 aa17.01■□□□□ 0.31
HOXC9-201ENST00000303450 FAM3BP58499 235 aaPredicted RBP17.01■□□□□ 0.31
HOXC9-201ENST00000303450 RHEBQ15382 184 aa17.01■□□□□ 0.31
HOXC9-201ENST00000303450 SVBPQ8N300 66 aa17■□□□□ 0.31
HOXC9-201ENST00000303450 LGALS9CQ6DKI2 356 aa16.99■□□□□ 0.31
HOXC9-201ENST00000303450 LYSTQ99698 3801 aa16.99■□□□□ 0.31
HOXC9-201ENST00000303450 MRPL54Q6P161 138 aaKnown RBP16.98■□□□□ 0.31
HOXC9-201ENST00000303450 NEGR1Q7Z3B1 354 aa16.98■□□□□ 0.31
HOXC9-201ENST00000303450 LINC00476Q8WZB0 136 aa16.98■□□□□ 0.31
HOXC9-201ENST00000303450 RPS10P5Q9NQ39 176 aa16.98■□□□□ 0.31
HOXC9-201ENST00000303450 TRBV10-1A0A0K0K1A3 114 aa16.97■□□□□ 0.31
HOXC9-201ENST00000303450 A0A1B0GW15 77 aa16.97■□□□□ 0.31
HOXC9-201ENST00000303450 SNAPINO95295 136 aa16.97■□□□□ 0.31
HOXC9-201ENST00000303450 LY6G6CO95867 125 aa16.97■□□□□ 0.31
HOXC9-201ENST00000303450 CCL18P55774 89 aa16.97■□□□□ 0.31
HOXC9-201ENST00000303450 SH2D6Q7Z4S9 175 aa16.97■□□□□ 0.31
HOXC9-201ENST00000303450 UBE2DNLQ8IWF7 75 aa16.97■□□□□ 0.31
HOXC9-201ENST00000303450 IMMP2LQ96T52 175 aa16.97■□□□□ 0.31
HOXC9-201ENST00000303450 TMEM191AQ9H0A3 160 aa16.97■□□□□ 0.31
HOXC9-201ENST00000303450 GAGE12JA6NER3 117 aa16.96■□□□□ 0.31
HOXC9-201ENST00000303450 CAMPP49913 170 aa16.96■□□□□ 0.31
HOXC9-201ENST00000303450 GAGE1Q13065 139 aa16.96■□□□□ 0.31
HOXC9-201ENST00000303450 GAGE4Q13068 117 aa16.96■□□□□ 0.31
HOXC9-201ENST00000303450 GAGE5Q13069 117 aa16.96■□□□□ 0.31
HOXC9-201ENST00000303450 GAGE13Q4V321 117 aa16.96■□□□□ 0.31
HOXC9-201ENST00000303450 SUMO4Q6EEV6 95 aa16.96■□□□□ 0.31
HOXC9-201ENST00000303450 TMEM242Q9NWH2 141 aa16.96■□□□□ 0.31
HOXC9-201ENST00000303450 Q9UF83 564 aa16.96■□□□□ 0.31
HOXC9-201ENST00000303450 A0A087WWC5 75 aa16.96■□□□□ 0.3
HOXC9-201ENST00000303450 H7C1H1 209 aa16.96■□□□□ 0.3
HOXC9-201ENST00000303450 KCNIP4Q6PIL6 250 aa16.96■□□□□ 0.3
HOXC9-201ENST00000303450 S100A8P05109 93 aa16.95■□□□□ 0.3
HOXC9-201ENST00000303450 HBBP68871 147 aa16.95■□□□□ 0.3
HOXC9-201ENST00000303450 RPL36AP83881 106 aaKnown RBP16.94■□□□□ 0.3
HOXC9-201ENST00000303450 ESRGQ1W209 222 aa16.94■□□□□ 0.3
HOXC9-201ENST00000303450 ATP5L2Q7Z4Y8 100 aa16.94■□□□□ 0.3
HOXC9-201ENST00000303450 RPL36ALQ969Q0 106 aaKnown RBP16.94■□□□□ 0.3
HOXC9-201ENST00000303450 LCE6AA0A183 80 aa16.93■□□□□ 0.3
HOXC9-201ENST00000303450 M0QY20 66 aa16.93■□□□□ 0.3
HOXC9-201ENST00000303450 ZNRF2Q8NHG8 242 aa16.93■□□□□ 0.3
HOXC9-201ENST00000303450 BTF3L4Q96K17 158 aa16.93■□□□□ 0.3
HOXC9-201ENST00000303450 TRBV7-3A0A075B6L6 115 aa16.92■□□□□ 0.3
HOXC9-201ENST00000303450 A0A1B0GXF2 115 aa16.92■□□□□ 0.3
HOXC9-201ENST00000303450 S100PP25815 95 aa16.92■□□□□ 0.3
HOXC9-201ENST00000303450 ATP6V0E2Q8NHE4 81 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms