RNA–Protein interactions for RNA: ENST00000301280.9

CHAF1A-201, Transcript of chromatin assembly factor 1 subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHAF1A, Length 3,339 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-201ENST00000301280 ID1P41134 155 aa11.73□□□□□ -0.53
CHAF1A-201ENST00000301280 KLHL30-AS1Q8NEE0 82 aa11.73□□□□□ -0.53
CHAF1A-201ENST00000301280 MRPL53Q96EL3 112 aaKnown RBP11.73□□□□□ -0.53
CHAF1A-201ENST00000301280 P0DMU3 169 aa11.73□□□□□ -0.53
CHAF1A-201ENST00000301280 FAM231AP0DMU4 169 aa11.73□□□□□ -0.53
CHAF1A-201ENST00000301280 FAM231CP0DMU5 169 aa11.73□□□□□ -0.53
CHAF1A-201ENST00000301280 SUMO2P61956 95 aaKnown RBP11.73□□□□□ -0.53
CHAF1A-201ENST00000301280 SEC11AP67812 179 aa11.73□□□□□ -0.53
CHAF1A-201ENST00000301280 LINC01356Q8N9X3 169 aa11.73□□□□□ -0.53
CHAF1A-201ENST00000301280 HOXD3P31249 432 aaPredicted RBP11.72□□□□□ -0.53
CHAF1A-201ENST00000301280 UNC79Q9P2D8 2635 aa11.72□□□□□ -0.53
CHAF1A-201ENST00000301280 DPM2O94777 84 aa11.72□□□□□ -0.53
CHAF1A-201ENST00000301280 SNRPD3P62318 126 aaKnown RBP11.72□□□□□ -0.53
CHAF1A-201ENST00000301280 TCTEX1D4Q5JR98 221 aa11.72□□□□□ -0.53
CHAF1A-201ENST00000301280 H3BRM9 83 aa11.71□□□□□ -0.53
CHAF1A-201ENST00000301280 DUSP14O95147 198 aaKnown RBP11.71□□□□□ -0.53
CHAF1A-201ENST00000301280 LGALS9BQ3B8N2 356 aa11.71□□□□□ -0.53
CHAF1A-201ENST00000301280 LGALS9CQ6DKI2 356 aa11.71□□□□□ -0.53
CHAF1A-201ENST00000301280 C2orf66Q6UXQ4 117 aa11.71□□□□□ -0.53
CHAF1A-201ENST00000301280 USMG5Q96IX5 58 aa11.71□□□□□ -0.53
CHAF1A-201ENST00000301280 OVOL1O14753 267 aa11.71□□□□□ -0.53
CHAF1A-201ENST00000301280 C9orf47Q6ZRZ4 202 aa11.71□□□□□ -0.53
CHAF1A-201ENST00000301280 OR11H1Q8NG94 326 aa11.71□□□□□ -0.53
CHAF1A-201ENST00000301280 IGHV3-38A0A0C4DH36 116 aa11.71□□□□□ -0.54
CHAF1A-201ENST00000301280 FXYD2P54710 66 aa11.71□□□□□ -0.54
CHAF1A-201ENST00000301280 PROK1P58294 105 aa11.71□□□□□ -0.54
CHAF1A-201ENST00000301280 ODF1Q14990 250 aa11.71□□□□□ -0.54
CHAF1A-201ENST00000301280 ZNF876PQ49A33 203 aa11.71□□□□□ -0.54
CHAF1A-201ENST00000301280 DYNLRB2Q8TF09 96 aa11.71□□□□□ -0.54
CHAF1A-201ENST00000301280 IGHV3-53P01767 116 aa11.7□□□□□ -0.54
CHAF1A-201ENST00000301280 SRSF9Q13242 221 aaKnown RBP eCLIP11.7□□□□□ -0.54
CHAF1A-201ENST00000301280 G3V4G9 280 aa11.7□□□□□ -0.54
CHAF1A-201ENST00000301280 K7EP34 96 aa11.7□□□□□ -0.54
CHAF1A-201ENST00000301280 Q8N8P6 123 aa11.7□□□□□ -0.54
CHAF1A-201ENST00000301280 DPH3P1Q9H4G8 78 aa11.7□□□□□ -0.54
CHAF1A-201ENST00000301280 AMTNQ6UX39 209 aa11.7□□□□□ -0.54
CHAF1A-201ENST00000301280 MAPKAPK5-AS1Q8N8E1 139 aa11.7□□□□□ -0.54
CHAF1A-201ENST00000301280 SMIM2Q9BVW6 85 aa11.7□□□□□ -0.54
CHAF1A-201ENST00000301280 PRSS29PA6NIE9 313 aa11.69□□□□□ -0.54
CHAF1A-201ENST00000301280 K7ERU9 68 aa11.69□□□□□ -0.54
CHAF1A-201ENST00000301280 PHLDA1Q8WV24 401 aaPredicted RBP11.69□□□□□ -0.54
CHAF1A-201ENST00000301280 RASL10AQ92737 203 aa11.69□□□□□ -0.54
CHAF1A-201ENST00000301280 HHLA3Q9XRX5 114 aa11.69□□□□□ -0.54
CHAF1A-201ENST00000301280 TP53TG1Q9Y2A0 90 aa11.69□□□□□ -0.54
CHAF1A-201ENST00000301280 APOMO95445 188 aa11.69□□□□□ -0.54
CHAF1A-201ENST00000301280 Q8N1Y9 231 aa11.69□□□□□ -0.54
CHAF1A-201ENST00000301280 XCL2Q9UBD3 114 aa11.69□□□□□ -0.54
CHAF1A-201ENST00000301280 TENM4Q6N022 2769 aa11.69□□□□□ -0.54
CHAF1A-201ENST00000301280 ADARB2-AS1A8MUL3 147 aa11.68□□□□□ -0.54
CHAF1A-201ENST00000301280 WFDC11Q8NEX6 87 aa11.68□□□□□ -0.54
CHAF1A-201ENST00000301280 CHTOPQ9Y3Y2 248 aaKnown RBP11.68□□□□□ -0.54
CHAF1A-201ENST00000301280 CEMP1Q6PRD7 247 aaPredicted RBP11.68□□□□□ -0.54
CHAF1A-201ENST00000301280 ZNF469Q96JG9 3925 aaPredicted RBP11.68□□□□□ -0.54
CHAF1A-201ENST00000301280 OR1N2Q8NGR9 330 aa11.68□□□□□ -0.54
CHAF1A-201ENST00000301280 RNASE3P12724 160 aaKnown RBP11.67□□□□□ -0.54
CHAF1A-201ENST00000301280 CHAC1Q9BUX1 264 aa11.67□□□□□ -0.54
CHAF1A-201ENST00000301280 NDUFS8O00217 210 aa11.67□□□□□ -0.54
CHAF1A-201ENST00000301280 NPC2P61916 151 aa11.67□□□□□ -0.54
CHAF1A-201ENST00000301280 NRACQ8N912 160 aa11.67□□□□□ -0.54
CHAF1A-201ENST00000301280 IGHV4-4A0A075B6R2 117 aa11.66□□□□□ -0.54
CHAF1A-201ENST00000301280 A0A0U1RRA0 63 aa11.66□□□□□ -0.54
CHAF1A-201ENST00000301280 A0A1W2PPM0 123 aa11.66□□□□□ -0.54
CHAF1A-201ENST00000301280 A6NDN8 102 aa11.66□□□□□ -0.54
CHAF1A-201ENST00000301280 SDHAF1A6NFY7 115 aa11.66□□□□□ -0.54
CHAF1A-201ENST00000301280 OR11H12B2RN74 326 aa11.66□□□□□ -0.54
CHAF1A-201ENST00000301280 OR11H2Q8NH07 326 aa11.66□□□□□ -0.54
CHAF1A-201ENST00000301280 TMEM238C9JI98 176 aa11.66□□□□□ -0.54
CHAF1A-201ENST00000301280 HSD52Q0P140 79 aa11.66□□□□□ -0.54
CHAF1A-201ENST00000301280 TRBV25-1A0A075B6N4 114 aa11.66□□□□□ -0.54
CHAF1A-201ENST00000301280 Q9UF83 564 aa11.66□□□□□ -0.54
CHAF1A-201ENST00000301280 ATP5LO75964 103 aa11.65□□□□□ -0.54
CHAF1A-201ENST00000301280 SPCS1Q9Y6A9 102 aa11.65□□□□□ -0.54
CHAF1A-201ENST00000301280 CFHR3Q02985 330 aa11.65□□□□□ -0.54
CHAF1A-201ENST00000301280 IGKV3OR2-268A0A0C4DH90 116 aa11.65□□□□□ -0.55
CHAF1A-201ENST00000301280 LOC107984156A0A0G2JMH3 177 aa11.65□□□□□ -0.55
CHAF1A-201ENST00000301280 ARL17AQ8IVW1 177 aa11.65□□□□□ -0.55
CHAF1A-201ENST00000301280 KIR2DL4Q99706 377 aa11.65□□□□□ -0.55
CHAF1A-201ENST00000301280 SLC25A16P16260 332 aa11.64□□□□□ -0.55
CHAF1A-201ENST00000301280 SUMO4Q6EEV6 95 aa11.64□□□□□ -0.55
CHAF1A-201ENST00000301280 LINC01587Q99440 93 aa11.64□□□□□ -0.55
CHAF1A-201ENST00000301280 GTF2H5Q6ZYL4 71 aa11.64□□□□□ -0.55
CHAF1A-201ENST00000301280 OR9G4Q8NGQ1 327 aa11.63□□□□□ -0.55
CHAF1A-201ENST00000301280 ZNF815PA8K554 130 aa11.63□□□□□ -0.55
CHAF1A-201ENST00000301280 TMEM61Q8N0U2 210 aa11.63□□□□□ -0.55
CHAF1A-201ENST00000301280 ZMAT4Q9H898 229 aa11.63□□□□□ -0.55
CHAF1A-201ENST00000301280 IGLV2-18A0A075B6J9 118 aa11.63□□□□□ -0.55
CHAF1A-201ENST00000301280 SIVA1O15304 175 aa11.63□□□□□ -0.55
CHAF1A-201ENST00000301280 VPREB3Q9UKI3 123 aa11.63□□□□□ -0.55
CHAF1A-201ENST00000301280 ZNF843Q8N446 348 aa11.62□□□□□ -0.55
CHAF1A-201ENST00000301280 ZNF580Q9UK33 172 aa11.62□□□□□ -0.55
CHAF1A-201ENST00000301280 LENEPQ9Y5L5 61 aa11.62□□□□□ -0.55
CHAF1A-201ENST00000301280 SMIM13P0DJ93 91 aa11.62□□□□□ -0.55
CHAF1A-201ENST00000301280 PSMB8P28062 276 aa11.62□□□□□ -0.55
CHAF1A-201ENST00000301280 DCANP1Q8TF63 244 aa11.62□□□□□ -0.55
CHAF1A-201ENST00000301280 FAM19A4Q96LR4 140 aa11.62□□□□□ -0.55
CHAF1A-201ENST00000301280 H3BUA1 57 aa11.61□□□□□ -0.55
CHAF1A-201ENST00000301280 SOCS3O14543 225 aa11.61□□□□□ -0.55
CHAF1A-201ENST00000301280 MRPL16Q9NX20 251 aaKnown RBP11.61□□□□□ -0.55
CHAF1A-201ENST00000301280 TEX48A0A1B0GUV7 120 aa11.61□□□□□ -0.55
CHAF1A-201ENST00000301280 SAMD5Q5TGI4 173 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms