RNA–Protein interactions for RNA: ENST00000284551.10

TRIM11-201, Transcript of tripartite motif containing 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM11, Length 2,715 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11-201ENST00000284551 CHAC1Q9BUX1 264 aa12.39□□□□□ -0.43
TRIM11-201ENST00000284551 CCDC168Q8NDH2 2452 aa12.39□□□□□ -0.43
TRIM11-201ENST00000284551 NIPBLQ6KC79 2804 aaeCLIP12.39□□□□□ -0.436e-6■■■□□ 16.7
TRIM11-201ENST00000284551 A0A087WX48 190 aa12.39□□□□□ -0.43
TRIM11-201ENST00000284551 SCGB3A1Q96QR1 104 aa12.39□□□□□ -0.43
TRIM11-201ENST00000284551 CR1P17927 2039 aa12.38□□□□□ -0.43
TRIM11-201ENST00000284551 CHD6Q8TD26 2715 aa12.38□□□□□ -0.43
TRIM11-201ENST00000284551 IGHV4OR15-8A0A075B7B6 117 aa12.38□□□□□ -0.43
TRIM11-201ENST00000284551 A0A087WW49 117 aa12.38□□□□□ -0.43
TRIM11-201ENST00000284551 KLLNB2CW77 178 aa12.38□□□□□ -0.43
TRIM11-201ENST00000284551 ATP5LO75964 103 aa12.38□□□□□ -0.43
TRIM11-201ENST00000284551 FAM74A4Q5TZK3 123 aa12.38□□□□□ -0.43
TRIM11-201ENST00000284551 UBR5O95071 2799 aaPredicted RBP12.38□□□□□ -0.43
TRIM11-201ENST00000284551 PRRC2AP48634 2157 aaKnown RBP12.38□□□□□ -0.43
TRIM11-201ENST00000284551 APCP25054 2843 aa12.38□□□□□ -0.43
TRIM11-201ENST00000284551 GAGE12HA6NDE8 117 aa12.38□□□□□ -0.43
TRIM11-201ENST00000284551 H3BMG7 143 aa12.38□□□□□ -0.43
TRIM11-201ENST00000284551 SPINK13Q1W4C9 94 aa12.38□□□□□ -0.43
TRIM11-201ENST00000284551 ETDBQ3ZM63 59 aa12.38□□□□□ -0.43
TRIM11-201ENST00000284551 APRG1Q8IVJ8 170 aa12.38□□□□□ -0.43
TRIM11-201ENST00000284551 KIF25-AS1Q9Y6Z4 181 aa12.38□□□□□ -0.43
TRIM11-201ENST00000284551 DUSP14O95147 198 aaKnown RBP12.37□□□□□ -0.43
TRIM11-201ENST00000284551 INSL3P51460 131 aa12.37□□□□□ -0.43
TRIM11-201ENST00000284551 BRI3O95415 125 aa12.37□□□□□ -0.43
TRIM11-201ENST00000284551 RPL39P62891 51 aaKnown RBP12.37□□□□□ -0.43
TRIM11-201ENST00000284551 C2orf66Q6UXQ4 117 aa12.37□□□□□ -0.43
TRIM11-201ENST00000284551 FAM159AQ6UWV7 190 aa12.36□□□□□ -0.43
TRIM11-201ENST00000284551 LINC01356Q8N9X3 169 aa12.36□□□□□ -0.43
TRIM11-201ENST00000284551 F5H697 171 aa12.35□□□□□ -0.43
TRIM11-201ENST00000284551 SUMO4Q6EEV6 95 aa12.35□□□□□ -0.43
TRIM11-201ENST00000284551 NOTCH3Q9UM47 2321 aa12.35□□□□□ -0.43
TRIM11-201ENST00000284551 BAALCQ8WXS3 180 aa12.35□□□□□ -0.43
TRIM11-201ENST00000284551 TOMM6Q96B49 74 aa12.35□□□□□ -0.43
TRIM11-201ENST00000284551 SIVA1O15304 175 aa12.34□□□□□ -0.43
TRIM11-201ENST00000284551 HTN1P15515 57 aa12.34□□□□□ -0.43
TRIM11-201ENST00000284551 HOXA3O43365 443 aaPredicted RBP12.34□□□□□ -0.43
TRIM11-201ENST00000284551 NEXN-AS1Q8NBZ9 246 aa12.34□□□□□ -0.43
TRIM11-201ENST00000284551 TSHBP01222 138 aa12.33□□□□□ -0.44
TRIM11-201ENST00000284551 CD300EQ496F6 205 aaPredicted RBP12.33□□□□□ -0.44
TRIM11-201ENST00000284551 Q8N1Y9 231 aa12.33□□□□□ -0.44
TRIM11-201ENST00000284551 SPAG8Q99932 426 aaPredicted RBP12.33□□□□□ -0.44
TRIM11-201ENST00000284551 PRSS29PA6NIE9 313 aa12.32□□□□□ -0.44
TRIM11-201ENST00000284551 K7EMT4 169 aa12.32□□□□□ -0.44
TRIM11-201ENST00000284551 SLURP1P55000 103 aa12.32□□□□□ -0.44
TRIM11-201ENST00000284551 F8VRH5 84 aa12.32□□□□□ -0.44
TRIM11-201ENST00000284551 CRYGDP07320 174 aa12.32□□□□□ -0.44
TRIM11-201ENST00000284551 HOXD3P31249 432 aaPredicted RBP12.32□□□□□ -0.44
TRIM11-201ENST00000284551 OPRPNQ99935 248 aaPredicted RBP12.32□□□□□ -0.44
TRIM11-201ENST00000284551 SPANXB1Q9NS25 103 aaPredicted RBP12.32□□□□□ -0.44
TRIM11-201ENST00000284551 ITPR3Q14573 2671 aa12.32□□□□□ -0.44
TRIM11-201ENST00000284551 A0A0J9YX75 114 aa12.31□□□□□ -0.44
TRIM11-201ENST00000284551 RBMY1A1P0DJD3 496 aaKnown RBP12.31□□□□□ -0.44
TRIM11-201ENST00000284551 RBMY1CP0DJD4 496 aa12.31□□□□□ -0.44
TRIM11-201ENST00000284551 ID1P41134 155 aa12.31□□□□□ -0.44
TRIM11-201ENST00000284551 RBMY1FQ15415 496 aaKnown RBP12.31□□□□□ -0.44
TRIM11-201ENST00000284551 ZNF702PQ9H963 129 aa12.31□□□□□ -0.44
TRIM11-201ENST00000284551 ZNF256Q9Y2P7 627 aaPredicted RBP12.31□□□□□ -0.44
TRIM11-201ENST00000284551 KNCNA6PVL3 124 aa12.31□□□□□ -0.44
TRIM11-201ENST00000284551 H7C1H1 209 aa12.31□□□□□ -0.44
TRIM11-201ENST00000284551 ORMDL2Q53FV1 153 aa12.31□□□□□ -0.44
TRIM11-201ENST00000284551 SFTA2Q6UW10 78 aa12.31□□□□□ -0.44
TRIM11-201ENST00000284551 C20orf78Q9BR46 151 aa12.31□□□□□ -0.44
TRIM11-201ENST00000284551 K7EQG2 157 aa12.31□□□□□ -0.44
TRIM11-201ENST00000284551 MORN3Q6PF18 240 aaPredicted RBP12.31□□□□□ -0.44
TRIM11-201ENST00000284551 ZNF843Q8N446 348 aa12.31□□□□□ -0.44
TRIM11-201ENST00000284551 KLHL30-AS1Q8NEE0 82 aa12.31□□□□□ -0.44
TRIM11-201ENST00000284551 PHLDA1Q8WV24 401 aaPredicted RBP12.31□□□□□ -0.44
TRIM11-201ENST00000284551 TP53TG1Q9Y2A0 90 aa12.31□□□□□ -0.44
TRIM11-201ENST00000284551 ACANP16112 2415 aa12.3□□□□□ -0.44
TRIM11-201ENST00000284551 IGHV3-16A0A0C4DH30 117 aa12.3□□□□□ -0.44
TRIM11-201ENST00000284551 IGHV3-73A0A0B4J1V6 119 aa12.3□□□□□ -0.44
TRIM11-201ENST00000284551 NXPH4O95158 308 aa12.3□□□□□ -0.44
TRIM11-201ENST00000284551 CKS1BP61024 79 aa12.3□□□□□ -0.44
TRIM11-201ENST00000284551 NACAE9PAV3 2078 aa12.29□□□□□ -0.44
TRIM11-201ENST00000284551 IGHV4-31P0DP07 118 aa12.29□□□□□ -0.44
TRIM11-201ENST00000284551 HLA-DRB4P13762 266 aa12.29□□□□□ -0.44
TRIM11-201ENST00000284551 SLC25A16P16260 332 aa12.29□□□□□ -0.44
TRIM11-201ENST00000284551 HLA-DRB4X5D2U9 266 aa12.29□□□□□ -0.44
TRIM11-201ENST00000284551 TRAV26-1A0A087WT03 109 aa12.29□□□□□ -0.44
TRIM11-201ENST00000284551 IGLL5B9A064 214 aa12.29□□□□□ -0.44
TRIM11-201ENST00000284551 CEND1Q8N111 149 aa12.29□□□□□ -0.44
TRIM11-201ENST00000284551 Q9UF83 564 aa12.29□□□□□ -0.44
TRIM11-201ENST00000284551 VPREB3Q9UKI3 123 aa12.29□□□□□ -0.44
TRIM11-201ENST00000284551 A0A1B0GV72 72 aa12.28□□□□□ -0.44
TRIM11-201ENST00000284551 MED14OSP0DP75 135 aa12.28□□□□□ -0.44
TRIM11-201ENST00000284551 PROK1P58294 105 aa12.28□□□□□ -0.44
TRIM11-201ENST00000284551 ZFP2Q6ZN57 461 aa12.28□□□□□ -0.44
TRIM11-201ENST00000284551 PLEKHB2Q96CS7 222 aa12.28□□□□□ -0.44
TRIM11-201ENST00000284551 ZNF479Q96JC4 524 aa12.28□□□□□ -0.44
TRIM11-201ENST00000284551 SDHAF1A6NFY7 115 aa12.28□□□□□ -0.44
TRIM11-201ENST00000284551 HIGD1BQ9P298 99 aa12.28□□□□□ -0.44
TRIM11-201ENST00000284551 ZNF580Q9UK33 172 aa12.28□□□□□ -0.44
TRIM11-201ENST00000284551 P0DMU3 169 aa12.27□□□□□ -0.44
TRIM11-201ENST00000284551 FAM231AP0DMU4 169 aa12.27□□□□□ -0.44
TRIM11-201ENST00000284551 FAM231CP0DMU5 169 aa12.27□□□□□ -0.44
TRIM11-201ENST00000284551 GATA3P23771 443 aa12.27□□□□□ -0.44
TRIM11-201ENST00000284551 PLNP26678 52 aa12.27□□□□□ -0.44
TRIM11-201ENST00000284551 POLR2KP53803 58 aaKnown RBP12.27□□□□□ -0.44
TRIM11-201ENST00000284551 ZNF56Q15929 161 aa12.27□□□□□ -0.44
TRIM11-201ENST00000284551 HIST2H2BCQ6DN03 193 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms