RNA–Protein interactions for RNA: ENST00000267484.9

RTN1-201, Transcript of reticulon 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RTN1, Length 3,435 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-201ENST00000267484 ZNF256Q9Y2P7 627 aaPredicted RBP12.66□□□□□ -0.38
RTN1-201ENST00000267484 TRAV12-2A0A075B6T6 113 aa12.65□□□□□ -0.38
RTN1-201ENST00000267484 SMCPP49901 116 aaPredicted RBP12.65□□□□□ -0.38
RTN1-201ENST00000267484 TMEM170BQ5T4T1 132 aa12.65□□□□□ -0.38
RTN1-201ENST00000267484 TSPAN13O95857 204 aa12.65□□□□□ -0.38
RTN1-201ENST00000267484 FAM159AQ6UWV7 190 aa12.65□□□□□ -0.39
RTN1-201ENST00000267484 CUBNO60494 3623 aa12.64□□□□□ -0.39
RTN1-201ENST00000267484 CLEC2AQ6UVW9 174 aa12.64□□□□□ -0.39
RTN1-201ENST00000267484 IGIPA6NJ69 53 aa12.63□□□□□ -0.39
RTN1-201ENST00000267484 J3QR89 54 aa12.63□□□□□ -0.39
RTN1-201ENST00000267484 ZNRF2Q8NHG8 242 aa12.63□□□□□ -0.39
RTN1-201ENST00000267484 SDHAF1A6NFY7 115 aa12.63□□□□□ -0.39
RTN1-201ENST00000267484 NDUFS8O00217 210 aa12.63□□□□□ -0.39
RTN1-201ENST00000267484 IGHV3-64A0A075B6Q5 118 aa12.62□□□□□ -0.39
RTN1-201ENST00000267484 LINC01619G3V211 115 aa12.62□□□□□ -0.39
RTN1-201ENST00000267484 A0A0J9YY99 117 aa12.62□□□□□ -0.39
RTN1-201ENST00000267484 C10orf99Q6UWK7 81 aa12.62□□□□□ -0.39
RTN1-201ENST00000267484 MDFICQ9P1T7 246 aa12.62□□□□□ -0.39
RTN1-201ENST00000267484 ZNF688P0C7X2 276 aa12.62□□□□□ -0.39
RTN1-201ENST00000267484 UBE2D1P51668 147 aa12.62□□□□□ -0.39
RTN1-201ENST00000267484 POLR2KP53803 58 aaKnown RBP12.62□□□□□ -0.39
RTN1-201ENST00000267484 NFE4Q86UQ8 179 aa12.62□□□□□ -0.39
RTN1-201ENST00000267484 PMVKQ15126 192 aa12.61□□□□□ -0.39
RTN1-201ENST00000267484 DAZ1Q9NQZ3 744 aaKnown RBP12.61□□□□□ -0.39
RTN1-201ENST00000267484 UTP20O75691 2785 aaKnown RBP12.61□□□□□ -0.39
RTN1-201ENST00000267484 IGHG2P01859 326 aa12.6□□□□□ -0.39
RTN1-201ENST00000267484 CRIP2P52943 208 aaPredicted RBP12.6□□□□□ -0.39
RTN1-201ENST00000267484 CFAP126Q5VTH2 177 aa12.6□□□□□ -0.39
RTN1-201ENST00000267484 APRG1Q8IVJ8 170 aa12.6□□□□□ -0.39
RTN1-201ENST00000267484 DLX4Q92988 240 aaPredicted RBP12.6□□□□□ -0.39
RTN1-201ENST00000267484 KLLNB2CW77 178 aa12.6□□□□□ -0.39
RTN1-201ENST00000267484 KIR2DL4Q99706 377 aa12.6□□□□□ -0.39
RTN1-201ENST00000267484 SPATA25Q9BR10 227 aa12.6□□□□□ -0.39
RTN1-201ENST00000267484 TMEM238LA0A1B0GVL6 79 aa12.6□□□□□ -0.39
RTN1-201ENST00000267484 A6NJY4 79 aa12.6□□□□□ -0.39
RTN1-201ENST00000267484 MED14OSP0DP75 135 aa12.6□□□□□ -0.39
RTN1-201ENST00000267484 USP9YO00507 2555 aaPredicted RBP12.59□□□□□ -0.39
RTN1-201ENST00000267484 ZANQ9Y493 2812 aa12.59□□□□□ -0.39
RTN1-201ENST00000267484 USMG5Q96IX5 58 aa12.59□□□□□ -0.39
RTN1-201ENST00000267484 ZNF56Q15929 161 aa12.59□□□□□ -0.39
RTN1-201ENST00000267484 NDUFA11Q86Y39 141 aa12.59□□□□□ -0.39
RTN1-201ENST00000267484 SYT8Q8NBV8 401 aa12.59□□□□□ -0.39
RTN1-201ENST00000267484 IGHV4OR15-8A0A075B7B6 117 aa12.58□□□□□ -0.4
RTN1-201ENST00000267484 A0A087WW49 117 aa12.58□□□□□ -0.4
RTN1-201ENST00000267484 VCYO14598 125 aa12.58□□□□□ -0.4
RTN1-201ENST00000267484 NXPH4O95158 308 aa12.58□□□□□ -0.4
RTN1-201ENST00000267484 FOXI1Q12951 378 aa12.58□□□□□ -0.4
RTN1-201ENST00000267484 ATP6V0BQ99437 205 aa12.58□□□□□ -0.4
RTN1-201ENST00000267484 PPP1R17O96001 155 aa12.58□□□□□ -0.4
RTN1-201ENST00000267484 HERVK_113P61574 105 aa12.58□□□□□ -0.4
RTN1-201ENST00000267484 DCANP1Q8TF63 244 aa12.58□□□□□ -0.4
RTN1-201ENST00000267484 FLNCQ14315 2725 aa12.58□□□□□ -0.4
RTN1-201ENST00000267484 CFC1BP0CG36 223 aa12.58□□□□□ -0.4
RTN1-201ENST00000267484 CFC1P0CG37 223 aa12.58□□□□□ -0.4
RTN1-201ENST00000267484 FHL3Q13643 280 aa12.58□□□□□ -0.4
RTN1-201ENST00000267484 TCL1BO95988 128 aa12.57□□□□□ -0.4
RTN1-201ENST00000267484 POM121L12Q8N7R1 296 aa12.57□□□□□ -0.4
RTN1-201ENST00000267484 ZNF580Q9UK33 172 aa12.57□□□□□ -0.4
RTN1-201ENST00000267484 A6NDX4 124 aa12.57□□□□□ -0.4
RTN1-201ENST00000267484 H7C2G1 150 aa12.56□□□□□ -0.4
RTN1-201ENST00000267484 UCNP55089 124 aa12.56□□□□□ -0.4
RTN1-201ENST00000267484 C1QTNF4Q9BXJ3 329 aa12.56□□□□□ -0.4
RTN1-201ENST00000267484 IGHV3-30P01768 117 aa12.56□□□□□ -0.4
RTN1-201ENST00000267484 IGHV3-30-5P0DP03 117 aa12.56□□□□□ -0.4
RTN1-201ENST00000267484 SPINK13Q1W4C9 94 aa12.56□□□□□ -0.4
RTN1-201ENST00000267484 RAX2Q96IS3 184 aa12.56□□□□□ -0.4
RTN1-201ENST00000267484 AVPP01185 164 aa12.56□□□□□ -0.4
RTN1-201ENST00000267484 GNLYP22749 145 aa12.56□□□□□ -0.4
RTN1-201ENST00000267484 Q8N1Y9 231 aa12.56□□□□□ -0.4
RTN1-201ENST00000267484 DUX5Q96PT3 197 aa12.56□□□□□ -0.4
RTN1-201ENST00000267484 POLQO75417 2590 aa12.55□□□□□ -0.4
RTN1-201ENST00000267484 J3QQQ9 107 aa12.55□□□□□ -0.4
RTN1-201ENST00000267484 HTN1P15515 57 aa12.55□□□□□ -0.4
RTN1-201ENST00000267484 UBE2D3P61077 147 aa12.55□□□□□ -0.4
RTN1-201ENST00000267484 UBE2D2P62837 147 aa12.55□□□□□ -0.4
RTN1-201ENST00000267484 ZNF876PQ49A33 203 aa12.55□□□□□ -0.4
RTN1-201ENST00000267484 AMELXQ99217 191 aa12.55□□□□□ -0.4
RTN1-201ENST00000267484 IGHV4-30-2A0A087WSY4 118 aa12.54□□□□□ -0.4
RTN1-201ENST00000267484 CENPEQ02224 2701 aa12.54□□□□□ -0.4
RTN1-201ENST00000267484 IGHV3-73A0A0B4J1V6 119 aa12.54□□□□□ -0.4
RTN1-201ENST00000267484 IGHV3-16A0A0C4DH30 117 aa12.54□□□□□ -0.4
RTN1-201ENST00000267484 IGLV1-40P01703 118 aa12.54□□□□□ -0.4
RTN1-201ENST00000267484 SCGB1C2P0DMR2 95 aa12.53□□□□□ -0.4
RTN1-201ENST00000267484 ID1P41134 155 aa12.53□□□□□ -0.4
RTN1-201ENST00000267484 CARD19Q96LW7 228 aa12.53□□□□□ -0.4
RTN1-201ENST00000267484 CFAP46Q8IYW2 2715 aa12.53□□□□□ -0.4
RTN1-201ENST00000267484 PRM2P04554 102 aa12.53□□□□□ -0.4
RTN1-201ENST00000267484 P0DMU3 169 aa12.53□□□□□ -0.4
RTN1-201ENST00000267484 FAM231AP0DMU4 169 aa12.53□□□□□ -0.4
RTN1-201ENST00000267484 FAM231CP0DMU5 169 aa12.53□□□□□ -0.4
RTN1-201ENST00000267484 LGALS3P17931 250 aaKnown RBP12.53□□□□□ -0.4
RTN1-201ENST00000267484 C2CD3Q4AC94 2353 aa12.53□□□□□ -0.4
RTN1-201ENST00000267484 SLC25A29Q8N8R3 303 aa12.53□□□□□ -0.4
RTN1-201ENST00000267484 TIMM17AQ99595 171 aa12.53□□□□□ -0.4
RTN1-201ENST00000267484 CDIP1Q9H305 208 aa12.53□□□□□ -0.4
RTN1-201ENST00000267484 TRBV27A0A0K0K1C4 114 aa12.53□□□□□ -0.4
RTN1-201ENST00000267484 ADARB2-AS1A8MUL3 147 aa12.53□□□□□ -0.4
RTN1-201ENST00000267484 M0QY20 66 aa12.53□□□□□ -0.4
RTN1-201ENST00000267484 TMEM141Q96I45 108 aa12.53□□□□□ -0.4
RTN1-201ENST00000267484 PIMREGQ9BSJ6 248 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms