RNA–Protein interactions for RNA: ENST00000244670.12

KLHDC3-201, Transcript of kelch domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene KLHDC3, Length 1,903 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC3-201ENST00000244670 HTN1P15515 57 aa13.17□□□□□ -0.3
KLHDC3-201ENST00000244670 PET117Q6UWS5 81 aa13.17□□□□□ -0.3
KLHDC3-201ENST00000244670 MRPL52Q86TS9 123 aaKnown RBP13.17□□□□□ -0.3
KLHDC3-201ENST00000244670 TRAV26-2A0A0B4J265 109 aa13.16□□□□□ -0.3
KLHDC3-201ENST00000244670 H0Y8G0 127 aa13.16□□□□□ -0.3
KLHDC3-201ENST00000244670 TNFRSF6BO95407 300 aa13.16□□□□□ -0.3
KLHDC3-201ENST00000244670 MDFICQ9P1T7 246 aa13.16□□□□□ -0.3
KLHDC3-201ENST00000244670 A0A096LNJ9 63 aa13.15□□□□□ -0.3
KLHDC3-201ENST00000244670 TRPT1Q86TN4 253 aaKnown RBP13.15□□□□□ -0.3
KLHDC3-201ENST00000244670 FBN1P35555 2871 aaKnown RBP13.15□□□□□ -0.3
KLHDC3-201ENST00000244670 IGHV3-16A0A0C4DH30 117 aa13.15□□□□□ -0.3
KLHDC3-201ENST00000244670 NXPH4O95158 308 aa13.15□□□□□ -0.3
KLHDC3-201ENST00000244670 PRM2P04554 102 aa13.15□□□□□ -0.3
KLHDC3-201ENST00000244670 ZNF747Q9BV97 191 aa13.15□□□□□ -0.3
KLHDC3-201ENST00000244670 C19orf73Q9NVV2 129 aa13.15□□□□□ -0.3
KLHDC3-201ENST00000244670 XCL2Q9UBD3 114 aa13.15□□□□□ -0.3
KLHDC3-201ENST00000244670 LAMTOR2Q9Y2Q5 125 aa13.15□□□□□ -0.3
KLHDC3-201ENST00000244670 CBY3A6NI87 242 aa13.14□□□□□ -0.31
KLHDC3-201ENST00000244670 IGLL1P15814 213 aa13.14□□□□□ -0.31
KLHDC3-201ENST00000244670 Q6ZN92 141 aa13.14□□□□□ -0.31
KLHDC3-201ENST00000244670 NRACQ8N912 160 aa13.14□□□□□ -0.31
KLHDC3-201ENST00000244670 MAP1LC3AQ9H492 121 aa13.14□□□□□ -0.31
KLHDC3-201ENST00000244670 CMC4P56277 68 aaPredicted RBP13.13□□□□□ -0.31
KLHDC3-201ENST00000244670 PRIMA1Q86XR5 153 aa13.13□□□□□ -0.31
KLHDC3-201ENST00000244670 INSP01308 110 aa13.13□□□□□ -0.31
KLHDC3-201ENST00000244670 C9orf66Q5T8R8 295 aa13.13□□□□□ -0.31
KLHDC3-201ENST00000244670 C14orf178Q8N769 122 aaPredicted RBP13.13□□□□□ -0.31
KLHDC3-201ENST00000244670 STAB1Q9NY15 2570 aa13.12□□□□□ -0.31
KLHDC3-201ENST00000244670 HNRNPA3P51991 378 aaKnown RBP13.12□□□□□ -0.31
KLHDC3-201ENST00000244670 CLUHP3Q96NS8 147 aa13.12□□□□□ -0.31
KLHDC3-201ENST00000244670 MCRIP2Q9BUT9 160 aaKnown RBP13.12□□□□□ -0.31
KLHDC3-201ENST00000244670 HBDP02042 147 aa13.11□□□□□ -0.31
KLHDC3-201ENST00000244670 RPL35AP18077 110 aaKnown RBP13.11□□□□□ -0.31
KLHDC3-201ENST00000244670 C9orf85Q96MD7 179 aa13.11□□□□□ -0.31
KLHDC3-201ENST00000244670 LINC01587Q99440 93 aa13.11□□□□□ -0.31
KLHDC3-201ENST00000244670 DPH3P1Q9H4G8 78 aa13.11□□□□□ -0.31
KLHDC3-201ENST00000244670 TRGV11A0A075B6L2 103 aa13.11□□□□□ -0.31
KLHDC3-201ENST00000244670 HSBP1L1C9JCN9 74 aa13.11□□□□□ -0.31
KLHDC3-201ENST00000244670 LINC01545Q5VT33 79 aa13.11□□□□□ -0.31
KLHDC3-201ENST00000244670 AP1S3Q96PC3 154 aa13.11□□□□□ -0.31
KLHDC3-201ENST00000244670 LINC01546A6NGU7 62 aa13.1□□□□□ -0.31
KLHDC3-201ENST00000244670 INSL3P51460 131 aa13.1□□□□□ -0.31
KLHDC3-201ENST00000244670 MRAP2Q96G30 205 aa13.1□□□□□ -0.31
KLHDC3-201ENST00000244670 FAM110AQ9BQ89 295 aa13.1□□□□□ -0.31
KLHDC3-201ENST00000244670 JPT2Q9H910 190 aa13.1□□□□□ -0.31
KLHDC3-201ENST00000244670 IGLV2-18A0A075B6J9 118 aa13.09□□□□□ -0.31
KLHDC3-201ENST00000244670 IGHV3OR16-12A0A075B7B8 117 aa13.09□□□□□ -0.31
KLHDC3-201ENST00000244670 hDV102S1A0JD36 115 aa13.09□□□□□ -0.31
KLHDC3-201ENST00000244670 DEFB125Q8N687 156 aa13.09□□□□□ -0.31
KLHDC3-201ENST00000244670 PMCHL2Q9BQD1 86 aa13.09□□□□□ -0.31
KLHDC3-201ENST00000244670 ST20Q9HBF5 79 aa13.09□□□□□ -0.31
KLHDC3-201ENST00000244670 NXT2Q9NPJ8 142 aaKnown RBP13.09□□□□□ -0.31
KLHDC3-201ENST00000244670 NUTF2P61970 127 aaKnown RBP13.09□□□□□ -0.31
KLHDC3-201ENST00000244670 BATFQ16520 125 aa13.09□□□□□ -0.31
KLHDC3-201ENST00000244670 TMEM208Q9BTX3 173 aa13.09□□□□□ -0.31
KLHDC3-201ENST00000244670 KIF25-AS1Q9Y6Z4 181 aa13.09□□□□□ -0.31
KLHDC3-201ENST00000244670 MGPP08493 103 aa13.08□□□□□ -0.32
KLHDC3-201ENST00000244670 PRSS47A8MTI9 375 aa13.07□□□□□ -0.32
KLHDC3-201ENST00000244670 LINC00315P59091 139 aa13.07□□□□□ -0.32
KLHDC3-201ENST00000244670 RASL10AQ92737 203 aa13.07□□□□□ -0.32
KLHDC3-201ENST00000244670 C1orf158Q8N1D5 194 aa13.07□□□□□ -0.32
KLHDC3-201ENST00000244670 Q8N8P6 123 aa13.07□□□□□ -0.32
KLHDC3-201ENST00000244670 ZMAT5Q9UDW3 170 aaKnown RBP13.07□□□□□ -0.32
KLHDC3-201ENST00000244670 A0A087WWL8 130 aa13.06□□□□□ -0.32
KLHDC3-201ENST00000244670 GTSCR1Q86UQ5 136 aa13.06□□□□□ -0.32
KLHDC3-201ENST00000244670 POM121L12Q8N7R1 296 aa13.06□□□□□ -0.32
KLHDC3-201ENST00000244670 C3orf56Q8N813 242 aa13.06□□□□□ -0.32
KLHDC3-201ENST00000244670 RPL39LQ96EH5 51 aaKnown RBP13.06□□□□□ -0.32
KLHDC3-201ENST00000244670 GIG44P09565 113 aaPredicted RBP13.05□□□□□ -0.32
KLHDC3-201ENST00000244670 SYT8Q8NBV8 401 aa13.05□□□□□ -0.32
KLHDC3-201ENST00000244670 IFI27L1Q96BM0 104 aa13.05□□□□□ -0.32
KLHDC3-201ENST00000244670 MRPS16Q9Y3D3 137 aaKnown RBP13.05□□□□□ -0.32
KLHDC3-201ENST00000244670 SMIM17P0DL12 118 aa13.04□□□□□ -0.32
KLHDC3-201ENST00000244670 ZNF876PQ49A33 203 aa13.04□□□□□ -0.32
KLHDC3-201ENST00000244670 FAM74A4Q5TZK3 123 aa13.04□□□□□ -0.32
KLHDC3-201ENST00000244670 WFDC9Q8NEX5 89 aa13.04□□□□□ -0.32
KLHDC3-201ENST00000244670 COL6A5A8TX70 2615 aa13.04□□□□□ -0.32
KLHDC3-201ENST00000244670 AZU1P20160 251 aa13.03□□□□□ -0.32
KLHDC3-201ENST00000244670 FCER1GP30273 86 aa13.03□□□□□ -0.32
KLHDC3-201ENST00000244670 LINC00469Q8N7U9 141 aa13.03□□□□□ -0.32
KLHDC3-201ENST00000244670 GOLT1BQ9Y3E0 138 aa13.03□□□□□ -0.32
KLHDC3-201ENST00000244670 ZNF415Q09FC8 603 aa13.03□□□□□ -0.32
KLHDC3-201ENST00000244670 LGALS9BQ3B8N2 356 aa13.03□□□□□ -0.32
KLHDC3-201ENST00000244670 LGALS9CQ6DKI2 356 aa13.03□□□□□ -0.32
KLHDC3-201ENST00000244670 C12orf54Q6X4T0 127 aa13.03□□□□□ -0.32
KLHDC3-201ENST00000244670 LINC00467Q9BRT7 94 aa13.03□□□□□ -0.32
KLHDC3-201ENST00000244670 SMIM2Q9BVW6 85 aa13.03□□□□□ -0.32
KLHDC3-201ENST00000244670 C11orf72Q8NBR9 251 aa13.02□□□□□ -0.32
KLHDC3-201ENST00000244670 TCAPO15273 167 aa13.01□□□□□ -0.33
KLHDC3-201ENST00000244670 SUMO2P61956 95 aaKnown RBP13.01□□□□□ -0.33
KLHDC3-201ENST00000244670 SLC25A34Q6PIV7 304 aa13.01□□□□□ -0.33
KLHDC3-201ENST00000244670 TMEM158Q8WZ71 300 aa13.01□□□□□ -0.33
KLHDC3-201ENST00000244670 C18orf15Q96N68 181 aa13.01□□□□□ -0.33
KLHDC3-201ENST00000244670 CMYA5Q8N3K9 4069 aa13.01□□□□□ -0.33
KLHDC3-201ENST00000244670 COL5A1-AS1Q5SY13 56 aa13.01□□□□□ -0.33
KLHDC3-201ENST00000244670 SUMO4Q6EEV6 95 aa13.01□□□□□ -0.33
KLHDC3-201ENST00000244670 F5H697 171 aa13□□□□□ -0.33
KLHDC3-201ENST00000244670 C20orf78Q9BR46 151 aa13□□□□□ -0.33
KLHDC3-201ENST00000244670 CRYGDP07320 174 aa13□□□□□ -0.33
KLHDC3-201ENST00000244670 LAGE3Q14657 143 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms