RNA–Protein interactions for RNA: ENST00000220562.8

EXTL3-201, Transcript of exostosin like glycosyltransferase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXTL3, Length 6,483 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3-201ENST00000220562 POLEQ07864 2286 aa13.71□□□□□ -0.21
EXTL3-201ENST00000220562 DOCK9Q9BZ29 2069 aa13.71□□□□□ -0.21
EXTL3-201ENST00000220562 EML6Q6ZMW3 1958 aa13.71□□□□□ -0.22
EXTL3-201ENST00000220562 FXYD2P54710 66 aa13.71□□□□□ -0.22
EXTL3-201ENST00000220562 VSIG2Q96IQ7 327 aa13.71□□□□□ -0.22
EXTL3-201ENST00000220562 TRBV12-3P01733 135 aa13.71□□□□□ -0.22
EXTL3-201ENST00000220562 TTTY13Q9BZ97 58 aa13.71□□□□□ -0.22
EXTL3-201ENST00000220562 LYPD6Q86Y78 171 aa13.7□□□□□ -0.22
EXTL3-201ENST00000220562 NDUFA1O15239 70 aa13.7□□□□□ -0.22
EXTL3-201ENST00000220562 SS18L2Q9UHA2 77 aa13.7□□□□□ -0.22
EXTL3-201ENST00000220562 DEFB135Q30KP9 77 aa13.7□□□□□ -0.22
EXTL3-201ENST00000220562 MED14OSP0DP75 135 aa13.7□□□□□ -0.22
EXTL3-201ENST00000220562 GPHB5Q86YW7 130 aa13.7□□□□□ -0.22
EXTL3-201ENST00000220562 NOTCH4Q99466 2003 aa13.69□□□□□ -0.22
EXTL3-201ENST00000220562 PRB2P02812 416 aaPredicted RBP13.69□□□□□ -0.22
EXTL3-201ENST00000220562 CTRLP40313 264 aa13.69□□□□□ -0.22
EXTL3-201ENST00000220562 IGLV1-47P01700 117 aa13.69□□□□□ -0.22
EXTL3-201ENST00000220562 DAZAP2Q15038 168 aaPredicted RBP13.69□□□□□ -0.22
EXTL3-201ENST00000220562 SIRPDQ9H106 197 aa13.69□□□□□ -0.22
EXTL3-201ENST00000220562 A0A1W2PNU3 283 aaPredicted RBP13.68□□□□□ -0.22
EXTL3-201ENST00000220562 C5orf47Q569G3 176 aa13.68□□□□□ -0.22
EXTL3-201ENST00000220562 UBE2AP49459 152 aa13.68□□□□□ -0.22
EXTL3-201ENST00000220562 TMEM61Q8N0U2 210 aa13.68□□□□□ -0.22
EXTL3-201ENST00000220562 DOCK7Q96N67 2140 aa13.68□□□□□ -0.22
EXTL3-201ENST00000220562 C11orf86A6NJI1 115 aa13.68□□□□□ -0.22
EXTL3-201ENST00000220562 UNQ9165/PRO28630Q6UXU0 137 aa13.68□□□□□ -0.22
EXTL3-201ENST00000220562 B5MCH6 92 aa13.68□□□□□ -0.22
EXTL3-201ENST00000220562 CLEC2BQ92478 149 aa13.68□□□□□ -0.22
EXTL3-201ENST00000220562 MDFICQ9P1T7 246 aa13.68□□□□□ -0.22
EXTL3-201ENST00000220562 LINC01620Q4KN68 170 aa13.67□□□□□ -0.22
EXTL3-201ENST00000220562 MYCNOSP40205 109 aa13.67□□□□□ -0.22
EXTL3-201ENST00000220562 E9PLD3 99 aa13.67□□□□□ -0.22
EXTL3-201ENST00000220562 CHKB-CPT1BH3BT56 60 aa13.67□□□□□ -0.22
EXTL3-201ENST00000220562 LGALS9O00182 355 aa13.67□□□□□ -0.22
EXTL3-201ENST00000220562 CLPSL1A2RUU4 121 aa13.66□□□□□ -0.22
EXTL3-201ENST00000220562 NREPQ16612 68 aa13.66□□□□□ -0.22
EXTL3-201ENST00000220562 FRMD6-AS1P0C7T7 363 aa13.66□□□□□ -0.22
EXTL3-201ENST00000220562 HIGD1BQ9P298 99 aa13.65□□□□□ -0.22
EXTL3-201ENST00000220562 TMEM89A2RUT3 159 aa13.64□□□□□ -0.23
EXTL3-201ENST00000220562 PROP1O75360 226 aa13.64□□□□□ -0.23
EXTL3-201ENST00000220562 WFDC9Q8NEX5 89 aa13.64□□□□□ -0.23
EXTL3-201ENST00000220562 COL6A6A6NMZ7 2263 aa13.64□□□□□ -0.23
EXTL3-201ENST00000220562 TRBV6-1A0A0K0K1D8 114 aa13.64□□□□□ -0.23
EXTL3-201ENST00000220562 H3BQ85 93 aa13.64□□□□□ -0.23
EXTL3-201ENST00000220562 LECT2O14960 151 aa13.64□□□□□ -0.23
EXTL3-201ENST00000220562 NDUFB1O75438 58 aa13.64□□□□□ -0.23
EXTL3-201ENST00000220562 PSMB8P28062 276 aa13.64□□□□□ -0.23
EXTL3-201ENST00000220562 MSMPQ1L6U9 139 aa13.64□□□□□ -0.23
EXTL3-201ENST00000220562 SPAG11BQ08648 103 aa13.64□□□□□ -0.23
EXTL3-201ENST00000220562 WFDC2Q14508 124 aa13.64□□□□□ -0.23
EXTL3-201ENST00000220562 WISP2O76076 250 aa13.63□□□□□ -0.23
EXTL3-201ENST00000220562 KLK12Q9UKR0 248 aa13.63□□□□□ -0.23
EXTL3-201ENST00000220562 A0A1B0GX51 115 aa13.63□□□□□ -0.23
EXTL3-201ENST00000220562 A6NDX4 124 aa13.63□□□□□ -0.23
EXTL3-201ENST00000220562 NFE4Q86UQ8 179 aa13.63□□□□□ -0.23
EXTL3-201ENST00000220562 USF3Q68DE3 2245 aa13.63□□□□□ -0.23
EXTL3-201ENST00000220562 DIDO1Q9BTC0 2240 aaKnown RBP13.63□□□□□ -0.23
EXTL3-201ENST00000220562 ODF1Q14990 250 aa13.62□□□□□ -0.23
EXTL3-201ENST00000220562 MIR7-3HGQ8N6C7 128 aa13.62□□□□□ -0.23
EXTL3-201ENST00000220562 SPANXCQ9NY87 97 aa13.62□□□□□ -0.23
EXTL3-201ENST00000220562 CXCL5P42830 114 aa13.62□□□□□ -0.23
EXTL3-201ENST00000220562 TMEM263Q8WUH6 116 aaKnown RBP13.62□□□□□ -0.23
EXTL3-201ENST00000220562 TNRC6BQ9UPQ9 1833 aaKnown RBP13.62□□□□□ -0.23
EXTL3-201ENST00000220562 IGHV1-58A0A0C4DH39 117 aa13.62□□□□□ -0.23
EXTL3-201ENST00000220562 TEN1Q86WV5 123 aa13.62□□□□□ -0.23
EXTL3-201ENST00000220562 MAP6D1Q9H9H5 199 aa13.61□□□□□ -0.23
EXTL3-201ENST00000220562 A0A0J9YX75 114 aa13.61□□□□□ -0.23
EXTL3-201ENST00000220562 DIRC1Q969H9 104 aa13.61□□□□□ -0.23
EXTL3-201ENST00000220562 FAM236AA0A1B0GUQ0 79 aa13.61□□□□□ -0.23
EXTL3-201ENST00000220562 FAM236BA0A1B0GV22 79 aa13.61□□□□□ -0.23
EXTL3-201ENST00000220562 TAX1BP3O14907 124 aa13.61□□□□□ -0.23
EXTL3-201ENST00000220562 FANCD2OSQ96PS1 177 aa13.61□□□□□ -0.23
EXTL3-201ENST00000220562 C19orf71A6NCJ1 209 aa13.61□□□□□ -0.23
EXTL3-201ENST00000220562 CEMP1Q6PRD7 247 aaPredicted RBP13.61□□□□□ -0.23
EXTL3-201ENST00000220562 TP53TG3Q9ULZ0 132 aa13.61□□□□□ -0.23
EXTL3-201ENST00000220562 TRBV10-2A0A0K0K1G8 114 aa13.6□□□□□ -0.23
EXTL3-201ENST00000220562 MP68P56378 58 aa13.6□□□□□ -0.23
EXTL3-201ENST00000220562 WFDC11Q8NEX6 87 aa13.59□□□□□ -0.23
EXTL3-201ENST00000220562 SPRY4Q9C004 299 aa13.59□□□□□ -0.23
EXTL3-201ENST00000220562 IGKV1D-37A0A075B6S9 117 aa13.59□□□□□ -0.23
EXTL3-201ENST00000220562 DNAJC9-AS1A6NH13 148 aa13.59□□□□□ -0.23
EXTL3-201ENST00000220562 CCDC140Q96MF4 163 aa13.59□□□□□ -0.23
EXTL3-201ENST00000220562 C11orf1Q9H5F2 150 aa13.59□□□□□ -0.23
EXTL3-201ENST00000220562 ATOX1O00244 68 aa13.59□□□□□ -0.23
EXTL3-201ENST00000220562 TM2D2Q9BX73 214 aa13.59□□□□□ -0.23
EXTL3-201ENST00000220562 P0DMU3 169 aa13.58□□□□□ -0.23
EXTL3-201ENST00000220562 FAM231AP0DMU4 169 aa13.58□□□□□ -0.23
EXTL3-201ENST00000220562 FAM231CP0DMU5 169 aa13.58□□□□□ -0.23
EXTL3-201ENST00000220562 Q6ZUT4 128 aa13.58□□□□□ -0.24
EXTL3-201ENST00000220562 FOXI1Q12951 378 aa13.58□□□□□ -0.24
EXTL3-201ENST00000220562 SMAD5-AS1Q9Y6J3 95 aa13.58□□□□□ -0.24
EXTL3-201ENST00000220562 EP300Q09472 2414 aaPredicted RBP13.57□□□□□ -0.24
EXTL3-201ENST00000220562 OBSL1O75147 1896 aa13.57□□□□□ -0.24
EXTL3-201ENST00000220562 TNRC6AQ8NDV7 1962 aaKnown RBP13.57□□□□□ -0.24
EXTL3-201ENST00000220562 COL4A3Q01955 1670 aa13.57□□□□□ -0.24
EXTL3-201ENST00000220562 JMJD7-PLA2G4BH0Y9G9 81 aa13.57□□□□□ -0.24
EXTL3-201ENST00000220562 ZNF80P51504 273 aaPredicted RBP13.57□□□□□ -0.24
EXTL3-201ENST00000220562 C20orf203Q8NBC4 194 aa13.57□□□□□ -0.24
EXTL3-201ENST00000220562 PLA2G5P39877 138 aa13.57□□□□□ -0.24
EXTL3-201ENST00000220562 Q8NA96 180 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms