RNA–Protein interactions for RNA: ENST00000066544.7

CDC27-201, Transcript of cell division cycle 27, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDC27, Length 5,801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-201ENST00000066544 TGFAP01135 160 aa6.21□□□□□ -1.41
CDC27-201ENST00000066544 ZNF56Q15929 161 aa6.21□□□□□ -1.41
CDC27-201ENST00000066544 KLK9Q2XQG4 91 aa6.21□□□□□ -1.41
CDC27-201ENST00000066544 OPRPNQ99935 248 aaPredicted RBP6.21□□□□□ -1.41
CDC27-201ENST00000066544 PRM2P04554 102 aa6.21□□□□□ -1.42
CDC27-201ENST00000066544 HLA-DRB4P13762 266 aa6.21□□□□□ -1.42
CDC27-201ENST00000066544 SRSF9Q13242 221 aaKnown RBP eCLIP6.21□□□□□ -1.42
CDC27-201ENST00000066544 HLA-DRB4X5D2U9 266 aa6.21□□□□□ -1.42
CDC27-201ENST00000066544 CHD6Q8TD26 2715 aa6.21□□□□□ -1.42
CDC27-201ENST00000066544 C12orf74Q32Q52 190 aa6.21□□□□□ -1.42
CDC27-201ENST00000066544 HIGD1BQ9P298 99 aa6.21□□□□□ -1.42
CDC27-201ENST00000066544 NOTCH2Q04721 2471 aa6.21□□□□□ -1.42
CDC27-201ENST00000066544 IGHV3-73A0A0B4J1V6 119 aa6.21□□□□□ -1.42
CDC27-201ENST00000066544 TEX48A0A1B0GUV7 120 aa6.21□□□□□ -1.42
CDC27-201ENST00000066544 COTL1Q14019 142 aa6.21□□□□□ -1.42
CDC27-201ENST00000066544 TMEM170BQ5T4T1 132 aa6.21□□□□□ -1.42
CDC27-201ENST00000066544 IGHV3-64A0A075B6Q5 118 aa6.21□□□□□ -1.42
CDC27-201ENST00000066544 APOMO95445 188 aa6.21□□□□□ -1.42
CDC27-201ENST00000066544 WFDC2Q14508 124 aa6.21□□□□□ -1.42
CDC27-201ENST00000066544 PLEKHB2Q96CS7 222 aa6.21□□□□□ -1.42
CDC27-201ENST00000066544 SUMO4Q6EEV6 95 aa6.2□□□□□ -1.42
CDC27-201ENST00000066544 TOMM6Q96B49 74 aa6.2□□□□□ -1.42
CDC27-201ENST00000066544 PRORYQ9H606 182 aa6.2□□□□□ -1.42
CDC27-201ENST00000066544 SDHAF1A6NFY7 115 aa6.2□□□□□ -1.42
CDC27-201ENST00000066544 IGLL5B9A064 214 aa6.2□□□□□ -1.42
CDC27-201ENST00000066544 NEXN-AS1Q8NBZ9 246 aa6.2□□□□□ -1.42
CDC27-201ENST00000066544 SH2D6Q7Z4S9 175 aa6.2□□□□□ -1.42
CDC27-201ENST00000066544 C11orf86A6NJI1 115 aa6.2□□□□□ -1.42
CDC27-201ENST00000066544 ID1P41134 155 aa6.2□□□□□ -1.42
CDC27-201ENST00000066544 DEFB136Q30KP8 78 aa6.2□□□□□ -1.42
CDC27-201ENST00000066544 KHDC1LQ5JSQ8 128 aa6.2□□□□□ -1.42
CDC27-201ENST00000066544 DUX3Q96PT4 197 aa6.2□□□□□ -1.42
CDC27-201ENST00000066544 C20orf78Q9BR46 151 aa6.2□□□□□ -1.42
CDC27-201ENST00000066544 MYMXA0A1B0GTQ4 84 aa6.19□□□□□ -1.42
CDC27-201ENST00000066544 RNF223E7ERA6 249 aa6.19□□□□□ -1.42
CDC27-201ENST00000066544 ETDBQ3ZM63 59 aa6.19□□□□□ -1.42
CDC27-201ENST00000066544 PHLDA1Q8WV24 401 aaPredicted RBP6.19□□□□□ -1.42
CDC27-201ENST00000066544 B4DSR2 109 aa6.19□□□□□ -1.42
CDC27-201ENST00000066544 PRB1P04280 392 aa6.19□□□□□ -1.42
CDC27-201ENST00000066544 LGALS1P09382 135 aaKnown RBP6.19□□□□□ -1.42
CDC27-201ENST00000066544 OR5A1Q8NGJ0 315 aa6.19□□□□□ -1.42
CDC27-201ENST00000066544 TM2D2Q9BX73 214 aa6.19□□□□□ -1.42
CDC27-201ENST00000066544 LOC107984156A0A0G2JMH3 177 aa6.19□□□□□ -1.42
CDC27-201ENST00000066544 CRIP2P52943 208 aaPredicted RBP6.19□□□□□ -1.42
CDC27-201ENST00000066544 ARL17AQ8IVW1 177 aa6.19□□□□□ -1.42
CDC27-201ENST00000066544 DCANP1Q8TF63 244 aa6.19□□□□□ -1.42
CDC27-201ENST00000066544 KIR2DL4Q99706 377 aa6.19□□□□□ -1.42
CDC27-201ENST00000066544 KNCNA6PVL3 124 aa6.19□□□□□ -1.42
CDC27-201ENST00000066544 IGLV1-40P01703 118 aa6.19□□□□□ -1.42
CDC27-201ENST00000066544 BEX4Q9NWD9 120 aaPredicted RBP6.19□□□□□ -1.42
CDC27-201ENST00000066544 USP24Q9UPU5 2620 aa6.19□□□□□ -1.42
CDC27-201ENST00000066544 FN1P02751 2386 aaKnown RBP6.18□□□□□ -1.42
CDC27-201ENST00000066544 ZFP2Q6ZN57 461 aa6.18□□□□□ -1.42
CDC27-201ENST00000066544 Q8N1Y9 231 aa6.18□□□□□ -1.42
CDC27-201ENST00000066544 LINC00315P59091 139 aa6.18□□□□□ -1.42
CDC27-201ENST00000066544 PRSS47A8MTI9 375 aa6.18□□□□□ -1.42
CDC27-201ENST00000066544 TSHBP01222 138 aa6.18□□□□□ -1.42
CDC27-201ENST00000066544 PGPEP1Q9NXJ5 209 aa6.18□□□□□ -1.42
CDC27-201ENST00000066544 KLLNB2CW77 178 aa6.17□□□□□ -1.42
CDC27-201ENST00000066544 MRPL16Q9NX20 251 aaKnown RBP6.17□□□□□ -1.42
CDC27-201ENST00000066544 KIF25-AS1Q9Y6Z4 181 aa6.17□□□□□ -1.42
CDC27-201ENST00000066544 TRAV12-1A0A0B4J245 112 aa6.17□□□□□ -1.42
CDC27-201ENST00000066544 LINC01549A6NIU2 74 aa6.17□□□□□ -1.42
CDC27-201ENST00000066544 ZNF876PQ49A33 203 aa6.17□□□□□ -1.42
CDC27-201ENST00000066544 TRBV7-3A0A075B6L6 115 aa6.17□□□□□ -1.42
CDC27-201ENST00000066544 CRYGDP07320 174 aa6.17□□□□□ -1.42
CDC27-201ENST00000066544 SNRPD3P62318 126 aaKnown RBP6.17□□□□□ -1.42
CDC27-201ENST00000066544 FAM19A4Q96LR4 140 aa6.17□□□□□ -1.42
CDC27-201ENST00000066544 C18orf65Q6ZTR6 163 aa6.17□□□□□ -1.42
CDC27-201ENST00000066544 ATP6V0BQ99437 205 aa6.17□□□□□ -1.42
CDC27-201ENST00000066544 IGHV4OR15-8A0A075B7B6 117 aa6.17□□□□□ -1.42
CDC27-201ENST00000066544 A0A087WW49 117 aa6.17□□□□□ -1.42
CDC27-201ENST00000066544 E9PLD3 99 aa6.17□□□□□ -1.42
CDC27-201ENST00000066544 H3BUA1 57 aa6.17□□□□□ -1.42
CDC27-201ENST00000066544 P0DMU3 169 aa6.17□□□□□ -1.42
CDC27-201ENST00000066544 FAM231AP0DMU4 169 aa6.17□□□□□ -1.42
CDC27-201ENST00000066544 FAM231CP0DMU5 169 aa6.17□□□□□ -1.42
CDC27-201ENST00000066544 RNASE13Q5GAN3 156 aaKnown RBP6.17□□□□□ -1.42
CDC27-201ENST00000066544 G3V4G9 280 aa6.16□□□□□ -1.42
CDC27-201ENST00000066544 NDUFS8O00217 210 aa6.16□□□□□ -1.42
CDC27-201ENST00000066544 VCYO14598 125 aa6.16□□□□□ -1.42
CDC27-201ENST00000066544 H7C2G1 150 aa6.16□□□□□ -1.42
CDC27-201ENST00000066544 RRN3P1Q2M238 152 aa6.16□□□□□ -1.42
CDC27-201ENST00000066544 A0A0J9YX75 114 aa6.16□□□□□ -1.42
CDC27-201ENST00000066544 HOXA3O43365 443 aaPredicted RBP6.16□□□□□ -1.42
CDC27-201ENST00000066544 PSMB8P28062 276 aa6.16□□□□□ -1.42
CDC27-201ENST00000066544 PROK1P58294 105 aa6.16□□□□□ -1.42
CDC27-201ENST00000066544 FOXI2Q6ZQN5 318 aa6.16□□□□□ -1.42
CDC27-201ENST00000066544 C11orf44Q8N8P7 122 aa6.16□□□□□ -1.42
CDC27-201ENST00000066544 GTSF1LQ9H1H1 148 aa6.16□□□□□ -1.42
CDC27-201ENST00000066544 HIVEP2P31629 2446 aa6.16□□□□□ -1.42
CDC27-201ENST00000066544 POLR2KP53803 58 aaKnown RBP6.16□□□□□ -1.42
CDC27-201ENST00000066544 NIPBLQ6KC79 2804 aaeCLIP6.15□□□□□ -1.42
CDC27-201ENST00000066544 HOXD3P31249 432 aaPredicted RBP6.15□□□□□ -1.42
CDC27-201ENST00000066544 TSPEAR-AS2P59090 65 aa6.15□□□□□ -1.42
CDC27-201ENST00000066544 PMVKQ15126 192 aa6.15□□□□□ -1.42
CDC27-201ENST00000066544 FLNAP21333 2647 aaKnown RBP6.15□□□□□ -1.42
CDC27-201ENST00000066544 IGHV3-16A0A0C4DH30 117 aa6.15□□□□□ -1.42
CDC27-201ENST00000066544 ADARB2-AS1A8MUL3 147 aa6.15□□□□□ -1.42
CDC27-201ENST00000066544 PPP1R17O96001 155 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 148.9 ms