RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 C19orf71A6NCJ1 209 aa9.23□□□□□ -0.93
CHPF2-201ENST00000035307 H7C1H1 209 aa9.23□□□□□ -0.93
CHPF2-201ENST00000035307 EDN2P20800 178 aa9.23□□□□□ -0.93
CHPF2-201ENST00000035307 WI2-2373I1.2A0A1W2PRP0 233 aa9.23□□□□□ -0.93
CHPF2-201ENST00000035307 NDUFA4O00483 81 aa9.23□□□□□ -0.93
CHPF2-201ENST00000035307 RPL13AP40429 203 aaKnown RBP9.23□□□□□ -0.93
CHPF2-201ENST00000035307 CRIP1P50238 77 aa9.23□□□□□ -0.93
CHPF2-201ENST00000035307 APRG1Q8IVJ8 170 aa9.23□□□□□ -0.93
CHPF2-201ENST00000035307 MRPS16Q9Y3D3 137 aaKnown RBP9.23□□□□□ -0.93
CHPF2-201ENST00000035307 IGHV7-4-1A0A0J9YVY3 117 aa9.23□□□□□ -0.93
CHPF2-201ENST00000035307 DUSP14O95147 198 aaKnown RBP9.23□□□□□ -0.93
CHPF2-201ENST00000035307 HOXD3P31249 432 aaPredicted RBP9.23□□□□□ -0.93
CHPF2-201ENST00000035307 AMTNQ6UX39 209 aa9.23□□□□□ -0.93
CHPF2-201ENST00000035307 APCP25054 2843 aa9.23□□□□□ -0.93
CHPF2-201ENST00000035307 CSMD1Q96PZ7 3565 aa9.22□□□□□ -0.93
CHPF2-201ENST00000035307 SPENQ96T58 3664 aaKnown RBP9.22□□□□□ -0.93
CHPF2-201ENST00000035307 TRAV13-1A0A0B4J241 112 aa9.22□□□□□ -0.93
CHPF2-201ENST00000035307 GAGE12BA1L429 117 aa9.22□□□□□ -0.93
CHPF2-201ENST00000035307 CUBNO60494 3623 aa9.22□□□□□ -0.93
CHPF2-201ENST00000035307 FBN2P35556 2912 aa9.22□□□□□ -0.93
CHPF2-201ENST00000035307 A0A1B0GV72 72 aa9.22□□□□□ -0.93
CHPF2-201ENST00000035307 LYRM7Q5U5X0 104 aa9.22□□□□□ -0.93
CHPF2-201ENST00000035307 MLST8Q9BVC4 326 aa9.22□□□□□ -0.93
CHPF2-201ENST00000035307 IGHV4OR15-8A0A075B7B6 117 aa9.22□□□□□ -0.93
CHPF2-201ENST00000035307 A0A087WW49 117 aa9.22□□□□□ -0.93
CHPF2-201ENST00000035307 SMIM2Q9BVW6 85 aa9.22□□□□□ -0.93
CHPF2-201ENST00000035307 CRYGBP07316 175 aa9.21□□□□□ -0.93
CHPF2-201ENST00000035307 LINC00310P59036 64 aa9.21□□□□□ -0.93
CHPF2-201ENST00000035307 SEC11AP67812 179 aa9.21□□□□□ -0.93
CHPF2-201ENST00000035307 INS-IGF2F8WCM5 200 aa9.21□□□□□ -0.94
CHPF2-201ENST00000035307 DEFB130BP0DP73 79 aa9.21□□□□□ -0.94
CHPF2-201ENST00000035307 DEFB130AP0DP74 79 aa9.21□□□□□ -0.94
CHPF2-201ENST00000035307 KLF5Q13887 457 aaPredicted RBP9.21□□□□□ -0.94
CHPF2-201ENST00000035307 BVES-AS1Q5T3Y7 98 aa9.21□□□□□ -0.94
CHPF2-201ENST00000035307 OR13C6PQ8NH95 151 aa9.21□□□□□ -0.94
CHPF2-201ENST00000035307 SMPXQ9UHP9 88 aa9.21□□□□□ -0.94
CHPF2-201ENST00000035307 GAS8-AS1O95177 125 aa9.21□□□□□ -0.94
CHPF2-201ENST00000035307 COX8AP10176 69 aa9.21□□□□□ -0.94
CHPF2-201ENST00000035307 Q8N8P6 123 aa9.21□□□□□ -0.94
CHPF2-201ENST00000035307 OR9G4Q8NGQ1 327 aa9.21□□□□□ -0.94
CHPF2-201ENST00000035307 A6NDX4 124 aa9.2□□□□□ -0.94
CHPF2-201ENST00000035307 C2orf70A6NJV1 201 aa9.2□□□□□ -0.94
CHPF2-201ENST00000035307 VCYO14598 125 aa9.2□□□□□ -0.94
CHPF2-201ENST00000035307 TRGV4A0A0C4DH28 118 aa9.2□□□□□ -0.94
CHPF2-201ENST00000035307 DNAJC9-AS1A6NH13 148 aa9.2□□□□□ -0.94
CHPF2-201ENST00000035307 J3QLI3 93 aa9.2□□□□□ -0.94
CHPF2-201ENST00000035307 K7EP13 123 aa9.2□□□□□ -0.94
CHPF2-201ENST00000035307 RNASE8Q8TDE3 154 aaKnown RBP9.2□□□□□ -0.94
CHPF2-201ENST00000035307 NIPBLQ6KC79 2804 aaeCLIP9.2□□□□□ -0.941e-6■■■■■ 30.7
CHPF2-201ENST00000035307 PGPEP1Q9NXJ5 209 aa9.19□□□□□ -0.94
CHPF2-201ENST00000035307 A0A1B0GXF2 115 aa9.19□□□□□ -0.94
CHPF2-201ENST00000035307 ESDP10768 282 aa9.19□□□□□ -0.94
CHPF2-201ENST00000035307 PAPPA-AS1Q5QFB9 102 aa9.19□□□□□ -0.94
CHPF2-201ENST00000035307 IGHG2P01859 326 aa9.19□□□□□ -0.94
CHPF2-201ENST00000035307 RPL39P62891 51 aaKnown RBP9.19□□□□□ -0.94
CHPF2-201ENST00000035307 CITED2Q99967 270 aaPredicted RBP9.19□□□□□ -0.94
CHPF2-201ENST00000035307 PRADC1Q9BSG0 188 aa9.19□□□□□ -0.94
CHPF2-201ENST00000035307 TRGV11A0A075B6L2 103 aa9.18□□□□□ -0.94
CHPF2-201ENST00000035307 CDKN1BP46527 198 aa9.18□□□□□ -0.94
CHPF2-201ENST00000035307 CHCHD5Q9BSY4 110 aa9.18□□□□□ -0.94
CHPF2-201ENST00000035307 CCL25O15444 150 aa9.18□□□□□ -0.94
CHPF2-201ENST00000035307 CD5LO43866 347 aa9.18□□□□□ -0.94
CHPF2-201ENST00000035307 IGHV1OR15-1A0A075B7D0 117 aa9.18□□□□□ -0.94
CHPF2-201ENST00000035307 ZNF48Q96MX3 618 aaPredicted RBP9.17□□□□□ -0.94
CHPF2-201ENST00000035307 SMAD5-AS1Q9Y6J3 95 aa9.17□□□□□ -0.94
CHPF2-201ENST00000035307 SMAGPQ0VAQ4 97 aa9.17□□□□□ -0.94
CHPF2-201ENST00000035307 LGALS9BQ3B8N2 356 aa9.17□□□□□ -0.94
CHPF2-201ENST00000035307 LGALS9CQ6DKI2 356 aa9.17□□□□□ -0.94
CHPF2-201ENST00000035307 TEX29Q8N6K0 151 aa9.17□□□□□ -0.94
CHPF2-201ENST00000035307 NBEAL2Q6ZNJ1 2754 aa9.17□□□□□ -0.94
CHPF2-201ENST00000035307 GAGE12JA6NER3 117 aa9.17□□□□□ -0.94
CHPF2-201ENST00000035307 PRM2P04554 102 aa9.17□□□□□ -0.94
CHPF2-201ENST00000035307 GAGE4Q13068 117 aa9.17□□□□□ -0.94
CHPF2-201ENST00000035307 GAGE5Q13069 117 aa9.17□□□□□ -0.94
CHPF2-201ENST00000035307 GAGE13Q4V321 117 aa9.17□□□□□ -0.94
CHPF2-201ENST00000035307 TMEM190Q8WZ59 177 aa9.17□□□□□ -0.94
CHPF2-201ENST00000035307 A0A096LPF7 62 aa9.16□□□□□ -0.94
CHPF2-201ENST00000035307 IGLV2-11P01706 119 aa9.16□□□□□ -0.94
CHPF2-201ENST00000035307 COX6CP09669 75 aa9.16□□□□□ -0.94
CHPF2-201ENST00000035307 PLNP26678 52 aa9.16□□□□□ -0.94
CHPF2-201ENST00000035307 PRSS29PA6NIE9 313 aa9.16□□□□□ -0.94
CHPF2-201ENST00000035307 PAX2Q02962 417 aa9.16□□□□□ -0.94
CHPF2-201ENST00000035307 ETDBQ3ZM63 59 aa9.16□□□□□ -0.94
CHPF2-201ENST00000035307 LY6G6DO95868 133 aa9.15□□□□□ -0.94
CHPF2-201ENST00000035307 CIRBPQ14011 172 aaKnown RBP9.15□□□□□ -0.94
CHPF2-201ENST00000035307 C16orf54Q6UWD8 224 aa9.15□□□□□ -0.94
CHPF2-201ENST00000035307 SPATA12Q7Z6I5 190 aa9.15□□□□□ -0.94
CHPF2-201ENST00000035307 OPRPNQ99935 248 aaPredicted RBP9.15□□□□□ -0.94
CHPF2-201ENST00000035307 MDFICQ9P1T7 246 aa9.15□□□□□ -0.94
CHPF2-201ENST00000035307 MYCNOSP40205 109 aa9.15□□□□□ -0.94
CHPF2-201ENST00000035307 RBX1P62877 108 aa9.15□□□□□ -0.94
CHPF2-201ENST00000035307 MRGPRG-AS1Q2M3A8 158 aa9.15□□□□□ -0.94
CHPF2-201ENST00000035307 PIFOQ8TCI5 191 aa9.15□□□□□ -0.94
CHPF2-201ENST00000035307 C20orf173Q96LM9 149 aa9.15□□□□□ -0.95
CHPF2-201ENST00000035307 GTSF1LQ9H1H1 148 aa9.15□□□□□ -0.95
CHPF2-201ENST00000035307 LINC01549A6NIU2 74 aa9.14□□□□□ -0.95
CHPF2-201ENST00000035307 LINC01619G3V211 115 aa9.14□□□□□ -0.95
CHPF2-201ENST00000035307 GAGE7O76087 117 aa9.14□□□□□ -0.95
CHPF2-201ENST00000035307 GAGE12FP0CL80 117 aa9.14□□□□□ -0.95
CHPF2-201ENST00000035307 GAGE12GP0CL81 117 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 373.3 ms