RNA–Protein interactions for RNA: ENST00000006275.8

TRAPPC6A-201, Transcript of trafficking protein particle complex 6A, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC6A, Length 805 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6A-201ENST00000006275 FRZBQ92765 325 aa12.94□□□□□ -0.34
TRAPPC6A-201ENST00000006275 DAZAP1Q96EP5 407 aaKnown RBP12.94□□□□□ -0.34
TRAPPC6A-201ENST00000006275 SMIM12Q96EX1 92 aa12.94□□□□□ -0.34
TRAPPC6A-201ENST00000006275 JPT2Q9H910 190 aa12.94□□□□□ -0.34
TRAPPC6A-201ENST00000006275 TRBV6-4A0A1B0GX49 114 aa12.93□□□□□ -0.34
TRAPPC6A-201ENST00000006275 A0A1W2PPQ1 181 aa12.93□□□□□ -0.34
TRAPPC6A-201ENST00000006275 RBFOX3A6NFN3 312 aa12.93□□□□□ -0.34
TRAPPC6A-201ENST00000006275 M0R381 172 aa12.93□□□□□ -0.34
TRAPPC6A-201ENST00000006275 ZFP2Q6ZN57 461 aa12.93□□□□□ -0.34
TRAPPC6A-201ENST00000006275 ZFP82Q8N141 532 aa12.93□□□□□ -0.34
TRAPPC6A-201ENST00000006275 SRRM2Q9UQ35 2752 aaKnown RBP12.92□□□□□ -0.34
TRAPPC6A-201ENST00000006275 NXPH4O95158 308 aa12.91□□□□□ -0.34
TRAPPC6A-201ENST00000006275 SH2D6Q7Z4S9 175 aa12.91□□□□□ -0.34
TRAPPC6A-201ENST00000006275 SAMD10Q9BYL1 202 aa12.91□□□□□ -0.34
TRAPPC6A-201ENST00000006275 TRBV20OR9-2A0A075B6H5 130 aa12.9□□□□□ -0.34
TRAPPC6A-201ENST00000006275 RHODO00212 210 aa12.9□□□□□ -0.34
TRAPPC6A-201ENST00000006275 SIVA1O15304 175 aa12.9□□□□□ -0.34
TRAPPC6A-201ENST00000006275 XGP55808 180 aa12.9□□□□□ -0.34
TRAPPC6A-201ENST00000006275 SFRP2Q96HF1 295 aa12.9□□□□□ -0.34
TRAPPC6A-201ENST00000006275 BIN3Q9NQY0 253 aa12.9□□□□□ -0.34
TRAPPC6A-201ENST00000006275 PGPEP1Q9NXJ5 209 aa12.9□□□□□ -0.34
TRAPPC6A-201ENST00000006275 MYCBP2O75592 4640 aa12.89□□□□□ -0.35
TRAPPC6A-201ENST00000006275 C19orf71A6NCJ1 209 aa12.89□□□□□ -0.35
TRAPPC6A-201ENST00000006275 SNAI2O43623 268 aa12.89□□□□□ -0.35
TRAPPC6A-201ENST00000006275 FUSP35637 526 aaKnown RBP eCLIP12.89□□□□□ -0.35
TRAPPC6A-201ENST00000006275 TOR2AQ5JU69 321 aa12.89□□□□□ -0.35
TRAPPC6A-201ENST00000006275 FAM74A4Q5TZK3 123 aa12.89□□□□□ -0.35
TRAPPC6A-201ENST00000006275 UFSP1Q6NVU6 142 aa12.89□□□□□ -0.35
TRAPPC6A-201ENST00000006275 Q6ZSN1 163 aa12.89□□□□□ -0.35
TRAPPC6A-201ENST00000006275 OR2D3Q8NGH3 330 aa12.89□□□□□ -0.35
TRAPPC6A-201ENST00000006275 A0A087WWL8 130 aa12.88□□□□□ -0.35
TRAPPC6A-201ENST00000006275 TMEM250H0YL14 139 aa12.88□□□□□ -0.35
TRAPPC6A-201ENST00000006275 OR5AL1P0C617 328 aa12.88□□□□□ -0.35
TRAPPC6A-201ENST00000006275 LINC00315P59091 139 aa12.88□□□□□ -0.35
TRAPPC6A-201ENST00000006275 OR10AG1Q8NH19 301 aa12.88□□□□□ -0.35
TRAPPC6A-201ENST00000006275 EIF5A2Q9GZV4 153 aaKnown RBP12.88□□□□□ -0.35
TRAPPC6A-201ENST00000006275 EREGO14944 169 aa12.87□□□□□ -0.35
TRAPPC6A-201ENST00000006275 P01737 135 aa12.87□□□□□ -0.35
TRAPPC6A-201ENST00000006275 RPS20P60866 119 aaKnown RBP12.87□□□□□ -0.35
TRAPPC6A-201ENST00000006275 SPANXN1Q5VSR9 72 aa12.87□□□□□ -0.35
TRAPPC6A-201ENST00000006275 SSBP4Q9BWG4 385 aaPredicted RBP12.87□□□□□ -0.35
TRAPPC6A-201ENST00000006275 FAT1Q14517 4588 aa12.87□□□□□ -0.35
TRAPPC6A-201ENST00000006275 MUC21A0A0G2JKD1 596 aa12.86□□□□□ -0.35
TRAPPC6A-201ENST00000006275 MUC21A0A140T8X8 626 aa12.86□□□□□ -0.35
TRAPPC6A-201ENST00000006275 CRYGDP07320 174 aa12.86□□□□□ -0.35
TRAPPC6A-201ENST00000006275 CEBPGP53567 150 aa12.86□□□□□ -0.35
TRAPPC6A-201ENST00000006275 CDPF1Q6NVV7 123 aa12.86□□□□□ -0.35
TRAPPC6A-201ENST00000006275 FAM210AQ96ND0 272 aa12.86□□□□□ -0.35
TRAPPC6A-201ENST00000006275 XKRY2A2RUG3 117 aa12.85□□□□□ -0.35
TRAPPC6A-201ENST00000006275 GZMBP10144 247 aa12.85□□□□□ -0.35
TRAPPC6A-201ENST00000006275 SSTP61278 116 aa12.85□□□□□ -0.35
TRAPPC6A-201ENST00000006275 TEX261Q6UWH6 196 aa12.85□□□□□ -0.35
TRAPPC6A-201ENST00000006275 C14orf178Q8N769 122 aaPredicted RBP12.85□□□□□ -0.35
TRAPPC6A-201ENST00000006275 OCC1Q8TAD7 63 aa12.85□□□□□ -0.35
TRAPPC6A-201ENST00000006275 GAGE12JA6NER3 117 aa12.84□□□□□ -0.35
TRAPPC6A-201ENST00000006275 TIRAPP58753 221 aa12.84□□□□□ -0.35
TRAPPC6A-201ENST00000006275 ERVFC1-1P60608 527 aa12.84□□□□□ -0.35
TRAPPC6A-201ENST00000006275 GAGE1Q13065 139 aa12.84□□□□□ -0.35
TRAPPC6A-201ENST00000006275 GAGE4Q13068 117 aa12.84□□□□□ -0.35
TRAPPC6A-201ENST00000006275 GAGE5Q13069 117 aa12.84□□□□□ -0.35
TRAPPC6A-201ENST00000006275 GAGE13Q4V321 117 aa12.84□□□□□ -0.35
TRAPPC6A-201ENST00000006275 Q6ZRN7 208 aaPredicted RBP12.84□□□□□ -0.35
TRAPPC6A-201ENST00000006275 WFDC10BQ8IUB3 73 aa12.84□□□□□ -0.35
TRAPPC6A-201ENST00000006275 FER1L6-AS1Q8NA97 138 aa12.84□□□□□ -0.35
TRAPPC6A-201ENST00000006275 NUDT10Q8NFP7 164 aa12.84□□□□□ -0.35
TRAPPC6A-201ENST00000006275 ATP6V0E2Q8NHE4 81 aa12.84□□□□□ -0.35
TRAPPC6A-201ENST00000006275 NUDT11Q96G61 164 aa12.84□□□□□ -0.35
TRAPPC6A-201ENST00000006275 TPPP3Q9BW30 176 aa12.84□□□□□ -0.35
TRAPPC6A-201ENST00000006275 LY96Q9Y6Y9 160 aa12.83□□□□□ -0.36
TRAPPC6A-201ENST00000006275 J3QL48 77 aa12.82□□□□□ -0.36
TRAPPC6A-201ENST00000006275 K7EN84 100 aa12.82□□□□□ -0.36
TRAPPC6A-201ENST00000006275 NDUFS6O75380 124 aaKnown RBP12.82□□□□□ -0.36
TRAPPC6A-201ENST00000006275 SMR3BP02814 79 aaPredicted RBP12.82□□□□□ -0.36
TRAPPC6A-201ENST00000006275 IGLC6P0CF74 106 aa12.82□□□□□ -0.36
TRAPPC6A-201ENST00000006275 GTSF1LQ9H1H1 148 aa12.82□□□□□ -0.36
TRAPPC6A-201ENST00000006275 KRTAP10-1P60331 282 aa12.81□□□□□ -0.36
TRAPPC6A-201ENST00000006275 ZNF56Q15929 161 aa12.81□□□□□ -0.36
TRAPPC6A-201ENST00000006275 RNASE7Q9H1E1 156 aaKnown RBP12.81□□□□□ -0.36
TRAPPC6A-201ENST00000006275 Q9UF83 564 aa12.81□□□□□ -0.36
TRAPPC6A-201ENST00000006275 TRAV9-2A0A087WT02 112 aa12.8□□□□□ -0.36
TRAPPC6A-201ENST00000006275 TRAV8-6A0A0B4J262 113 aa12.8□□□□□ -0.36
TRAPPC6A-201ENST00000006275 SRP19P09132 144 aaKnown RBP12.8□□□□□ -0.36
TRAPPC6A-201ENST00000006275 SMIM17P0DL12 118 aa12.8□□□□□ -0.36
TRAPPC6A-201ENST00000006275 LINC00694P0DN24 101 aa12.8□□□□□ -0.36
TRAPPC6A-201ENST00000006275 CACNG7P62955 275 aa12.8□□□□□ -0.36
TRAPPC6A-201ENST00000006275 OR10J3Q5JRS4 329 aa12.8□□□□□ -0.36
TRAPPC6A-201ENST00000006275 LELP1Q5T871 98 aa12.8□□□□□ -0.36
TRAPPC6A-201ENST00000006275 AP1S3Q96PC3 154 aa12.8□□□□□ -0.36
TRAPPC6A-201ENST00000006275 SMIM7Q9BQ49 75 aa12.8□□□□□ -0.36
TRAPPC6A-201ENST00000006275 RPP21Q9H633 154 aaKnown RBP12.8□□□□□ -0.36
TRAPPC6A-201ENST00000006275 TRBV10-1A0A0K0K1A3 114 aa12.79□□□□□ -0.36
TRAPPC6A-201ENST00000006275 F2Z2F3 143 aa12.79□□□□□ -0.36
TRAPPC6A-201ENST00000006275 DNAH10OSP0CZ25 163 aa12.79□□□□□ -0.36
TRAPPC6A-201ENST00000006275 EVI2AP22794 236 aa12.79□□□□□ -0.36
TRAPPC6A-201ENST00000006275 RAB4BP61018 213 aa12.79□□□□□ -0.36
TRAPPC6A-201ENST00000006275 F5H697 171 aa12.78□□□□□ -0.36
TRAPPC6A-201ENST00000006275 FAM229AH3BQW9 127 aa12.78□□□□□ -0.36
TRAPPC6A-201ENST00000006275 LYZL1Q6UWQ5 148 aa12.78□□□□□ -0.36
TRAPPC6A-201ENST00000006275 IGHV3-38A0A0C4DH36 116 aa12.77□□□□□ -0.37
TRAPPC6A-201ENST00000006275 ZNF727A8MUV8 499 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms