RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Vma21Q78T54 101 aa11.04□□□□□ -0.64
Nup88-201ENSMUST00000035283 Olfr963Q7TRA9 311 aa11.04□□□□□ -0.64
Nup88-201ENSMUST00000035283 Tmem91Q8C581 172 aa11.04□□□□□ -0.64
Nup88-201ENSMUST00000035283 Mgst1Q91VS7 155 aa11.04□□□□□ -0.64
Nup88-201ENSMUST00000035283 Susd2Q9DBX3 820 aa11.04□□□□□ -0.64
Nup88-201ENSMUST00000035283 Spta1P08032 2415 aa11.04□□□□□ -0.64
Nup88-201ENSMUST00000035283 Akap9Q70FJ1 3797 aa11.04□□□□□ -0.64
Nup88-201ENSMUST00000035283 Ccl1P10146 92 aa11.03□□□□□ -0.64
Nup88-201ENSMUST00000035283 Pcgf2P23798 342 aaKnown RBP11.03□□□□□ -0.64
Nup88-201ENSMUST00000035283 1700001C19RikQ8K168 210 aa11.03□□□□□ -0.64
Nup88-201ENSMUST00000035283 Olfr577Q8VH11 312 aa11.03□□□□□ -0.64
Nup88-201ENSMUST00000035283 Fam162bQ9CX19 157 aa11.03□□□□□ -0.64
Nup88-201ENSMUST00000035283 G6pc2Q9Z186 355 aa11.03□□□□□ -0.64
Nup88-201ENSMUST00000035283 TectaO08523 2155 aa11.03□□□□□ -0.64
Nup88-201ENSMUST00000035283 Med12lQ8BQM9 2157 aa11.03□□□□□ -0.64
Nup88-201ENSMUST00000035283 Vmn1r224E9PWK2 298 aa11.03□□□□□ -0.64
Nup88-201ENSMUST00000035283 Rnf212F6TQD1 307 aa11.03□□□□□ -0.64
Nup88-201ENSMUST00000035283 Colca2F8VPY8 239 aa11.03□□□□□ -0.64
Nup88-201ENSMUST00000035283 Iqcf6G3UWF2 157 aa11.03□□□□□ -0.64
Nup88-201ENSMUST00000035283 1700009N14RikQ14AA6 216 aaKnown RBP11.03□□□□□ -0.64
Nup88-201ENSMUST00000035283 Spred3Q6P6N5 408 aa11.03□□□□□ -0.64
Nup88-201ENSMUST00000035283 Cdcp2Q8BQH6 427 aa11.03□□□□□ -0.64
Nup88-201ENSMUST00000035283 Olfr1183Q8VFF8 303 aa11.03□□□□□ -0.64
Nup88-201ENSMUST00000035283 Olfr984Q8VFN1 314 aa11.03□□□□□ -0.64
Nup88-201ENSMUST00000035283 GmppaQ922H4 420 aa11.03□□□□□ -0.64
Nup88-201ENSMUST00000035283 Ssbp2Q9CYZ8 361 aa11.03□□□□□ -0.64
Nup88-201ENSMUST00000035283 Zfhx3Q61329 3726 aa11.03□□□□□ -0.64
Nup88-201ENSMUST00000035283 Olfr1458A0A1L1SSD5 307 aa11.02□□□□□ -0.64
Nup88-201ENSMUST00000035283 Mmp23O88676 391 aa11.02□□□□□ -0.64
Nup88-201ENSMUST00000035283 Q0VG62 139 aa11.02□□□□□ -0.64
Nup88-201ENSMUST00000035283 Cdc42ep2Q8JZX9 214 aa11.02□□□□□ -0.64
Nup88-201ENSMUST00000035283 Q8VC23 124 aa11.02□□□□□ -0.64
Nup88-201ENSMUST00000035283 Ndufa2Q9CQ75 99 aa11.02□□□□□ -0.64
Nup88-201ENSMUST00000035283 Fam103a1Q9CQY2 119 aaKnown RBP11.02□□□□□ -0.64
Nup88-201ENSMUST00000035283 ChtopQ9CY57 249 aaKnown RBP11.02□□□□□ -0.64
Nup88-201ENSMUST00000035283 Prss37Q9DAA4 237 aa11.02□□□□□ -0.64
Nup88-201ENSMUST00000035283 Pla2g2eQ9QUL3 142 aa11.02□□□□□ -0.64
Nup88-201ENSMUST00000035283 DdtO35215 118 aa11.02□□□□□ -0.65
Nup88-201ENSMUST00000035283 Ifna5P07349 189 aa11.02□□□□□ -0.65
Nup88-201ENSMUST00000035283 Twist1P26687 206 aa11.02□□□□□ -0.65
Nup88-201ENSMUST00000035283 Sftpa1P35242 248 aa11.02□□□□□ -0.65
Nup88-201ENSMUST00000035283 Q3U1D9 316 aa11.02□□□□□ -0.65
Nup88-201ENSMUST00000035283 Tmem40Q4FJU9 225 aa11.02□□□□□ -0.65
Nup88-201ENSMUST00000035283 Olfr147Q60886 317 aa11.02□□□□□ -0.65
Nup88-201ENSMUST00000035283 Olfr25Q7TRD6 313 aa11.02□□□□□ -0.65
Nup88-201ENSMUST00000035283 Fam168aQ8BGZ2 244 aa11.02□□□□□ -0.65
Nup88-201ENSMUST00000035283 Vmn1r222Q8R269 308 aa11.02□□□□□ -0.65
Nup88-201ENSMUST00000035283 Tmem190Q9D2E9 166 aa11.02□□□□□ -0.65
Nup88-201ENSMUST00000035283 Fancd2osQ9D4K4 178 aa11.02□□□□□ -0.65
Nup88-201ENSMUST00000035283 4931428L18RikQ9D4S9 127 aa11.02□□□□□ -0.65
Nup88-201ENSMUST00000035283 H2al3Q9D4U4 128 aa11.02□□□□□ -0.65
Nup88-201ENSMUST00000035283 Q9D8L0 127 aa11.02□□□□□ -0.65
Nup88-201ENSMUST00000035283 Trav13n-4A0A0G2JG01 110 aa11.01□□□□□ -0.65
Nup88-201ENSMUST00000035283 A0A1L1SR50 188 aa11.01□□□□□ -0.65
Nup88-201ENSMUST00000035283 Olfr1024A2ASU7 327 aa11.01□□□□□ -0.65
Nup88-201ENSMUST00000035283 Gm5741B2RVA4 72 aa11.01□□□□□ -0.65
Nup88-201ENSMUST00000035283 Gm11027G8JL69 66 aa11.01□□□□□ -0.65
Nup88-201ENSMUST00000035283 UngP97931 306 aa11.01□□□□□ -0.65
Nup88-201ENSMUST00000035283 Rtl4Q3URY0 304 aa11.01□□□□□ -0.65
Nup88-201ENSMUST00000035283 Q6DIA7 600 aa11.01□□□□□ -0.65
Nup88-201ENSMUST00000035283 Jpt2Q6PGH2 190 aaKnown RBP11.01□□□□□ -0.65
Nup88-201ENSMUST00000035283 Tas2r114Q7M722 309 aa11.01□□□□□ -0.65
Nup88-201ENSMUST00000035283 Smim19Q80ZU4 107 aa11.01□□□□□ -0.65
Nup88-201ENSMUST00000035283 Rhbdd1Q8BHC7 315 aa11.01□□□□□ -0.65
Nup88-201ENSMUST00000035283 GrhprQ91Z53 328 aa11.01□□□□□ -0.65
Nup88-201ENSMUST00000035283 Rnf2Q9CQJ4 336 aa11.01□□□□□ -0.65
Nup88-201ENSMUST00000035283 Vmn1r171Q9EPS6 316 aa11.01□□□□□ -0.65
Nup88-201ENSMUST00000035283 Trav16A0A075B653 116 aa11.01□□□□□ -0.65
Nup88-201ENSMUST00000035283 Ighv1-15A0A0A6YXA5 117 aa11.01□□□□□ -0.65
Nup88-201ENSMUST00000035283 Ighv9-2A0A0B4J1J4 117 aa11.01□□□□□ -0.65
Nup88-201ENSMUST00000035283 PigyP0C1P0 71 aa11.01□□□□□ -0.65
Nup88-201ENSMUST00000035283 Rab7aP51150 207 aaKnown RBP11.01□□□□□ -0.65
Nup88-201ENSMUST00000035283 Sumo1P63166 101 aaKnown RBP11.01□□□□□ -0.65
Nup88-201ENSMUST00000035283 Col9a1Q05722 921 aa11.01□□□□□ -0.65
Nup88-201ENSMUST00000035283 Fgfrl1Q91V87 529 aa11.01□□□□□ -0.65
Nup88-201ENSMUST00000035283 Cisd1Q91WS0 108 aaKnown RBP11.01□□□□□ -0.65
Nup88-201ENSMUST00000035283 Ssbp3Q9D032 388 aa11.01□□□□□ -0.65
Nup88-201ENSMUST00000035283 Lamtor5Q9D1L9 91 aa11.01□□□□□ -0.65
Nup88-201ENSMUST00000035283 Fkbp11Q9D1M7 201 aa11.01□□□□□ -0.65
Nup88-201ENSMUST00000035283 CstadQ9D245 104 aa11.01□□□□□ -0.65
Nup88-201ENSMUST00000035283 Crim1Q9JLL0 1037 aa11.01□□□□□ -0.65
Nup88-201ENSMUST00000035283 CnmdQ9Z1F6 334 aa11.01□□□□□ -0.65
Nup88-201ENSMUST00000035283 Samt3A2ARK7 233 aa11□□□□□ -0.65
Nup88-201ENSMUST00000035283 Olfr1189A2AV11 306 aa11□□□□□ -0.65
Nup88-201ENSMUST00000035283 Lbhd2G3UW55 114 aa11□□□□□ -0.65
Nup88-201ENSMUST00000035283 Gm21732J3QM79 361 aa11□□□□□ -0.65
Nup88-201ENSMUST00000035283 Gm21921J3QNB5 361 aa11□□□□□ -0.65
Nup88-201ENSMUST00000035283 Rdh16O54909 317 aa11□□□□□ -0.65
Nup88-201ENSMUST00000035283 Plscr4P58196 326 aa11□□□□□ -0.65
Nup88-201ENSMUST00000035283 Smim6Q3U0I6 56 aa11□□□□□ -0.65
Nup88-201ENSMUST00000035283 Fam19a2Q7TPG7 131 aa11□□□□□ -0.65
Nup88-201ENSMUST00000035283 Olfr1441Q8VFV3 318 aa11□□□□□ -0.65
Nup88-201ENSMUST00000035283 Rpp25lQ99JH1 163 aa11□□□□□ -0.65
Nup88-201ENSMUST00000035283 Nup37Q9CWU9 326 aa11□□□□□ -0.65
Nup88-201ENSMUST00000035283 St6galnac6Q9JM95 333 aa11□□□□□ -0.65
Nup88-201ENSMUST00000035283 Dnajc13D4AFX7 2248 aaKnown RBP11□□□□□ -0.65
Nup88-201ENSMUST00000035283 AponG3X9D6 251 aa11□□□□□ -0.65
Nup88-201ENSMUST00000035283 Ascl5M0QWB7 188 aa11□□□□□ -0.65
Nup88-201ENSMUST00000035283 Hoxa6P09092 232 aa11□□□□□ -0.65
Nup88-201ENSMUST00000035283 Wt1P22561 449 aa11□□□□□ -0.65
Retrieved 100 of 22,080 RNA–protein pairs in 139.4 ms