RNA–Protein interactions for RNA: ENST00000632629.1

NPHP3-ACAD11-202, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2

Gene NPHP3-ACAD11, Length 695 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-202ENST00000632629 ARL11Q969Q4 196 aa0.53□□□□□ -2.32
NPHP3-ACAD11-202ENST00000632629 CIB3Q96Q77 187 aaPredicted RBP0.53□□□□□ -2.32
NPHP3-ACAD11-202ENST00000632629 CST9LQ9H4G1 147 aa0.53□□□□□ -2.32
NPHP3-ACAD11-202ENST00000632629 MED9Q9NWA0 146 aa0.53□□□□□ -2.32
NPHP3-ACAD11-202ENST00000632629 BLMP54132 1417 aaPredicted RBP0.53□□□□□ -2.32
NPHP3-ACAD11-202ENST00000632629 TRANK1O15050 2925 aa0.53□□□□□ -2.32
NPHP3-ACAD11-202ENST00000632629 ABCA4P78363 2273 aa0.53□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 CNTRLQ7Z7A1 2325 aa0.53□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 ABCA2Q9BZC7 2435 aa0.53□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 LRRC37A3O60309 1634 aa0.53□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 KIAA1551Q9HCM1 1747 aa0.52□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 ESPL1Q14674 2120 aa0.52□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 ZDBF2Q9HCK1 2354 aa0.52□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 TRAV12-2A0A075B6T6 113 aa0.52□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 TRAV14DV4A0A0A6YYC5 116 aa0.52□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 TRBV6-8A0A0A6YYG3 113 aa0.52□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 TRAV2A0A0B4J234 112 aa0.52□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 GNG7O60262 68 aa0.52□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 HYPMO75409 117 aa0.52□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 IGHV3-30P01768 117 aa0.52□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 APOC1P02654 83 aa0.52□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 IGHV3-30-5P0DP03 117 aa0.52□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 COX7CP15954 63 aa0.52□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 PDE6GP18545 87 aa0.52□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 FGF7P21781 194 aa0.52□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 ETV6P41212 452 aa0.52□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 COPZ1P61923 177 aa0.52□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 OCIAD2Q56VL3 154 aa0.52□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 Q6AWC8 147 aa0.52□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 SCIMPQ6UWF3 145 aa0.52□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 C2orf82Q6UX34 121 aa0.52□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 CASC2Q6XLA1 102 aa0.52□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 ATOH7Q8N100 152 aa0.52□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 MMGT1Q8N4V1 131 aa0.52□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 ATP6V0E2Q8NHE4 81 aa0.52□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 LSM10Q969L4 123 aaKnown RBP0.52□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 LIMD2Q9BT23 127 aa0.52□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 REG4Q9BYZ8 158 aa0.52□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 CCNB3Q8WWL7 1395 aa0.52□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 IBTKQ9P2D0 1353 aaPredicted RBP0.52□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 DAPK1P53355 1430 aa0.52□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 CASKIN1Q8WXD9 1431 aa0.52□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 CNTLNQ9NXG0 1405 aa0.52□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 SHANK2Q9UPX8 1470 aa0.52□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 LAMC3Q9Y6N6 1575 aa0.52□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 SCN7AQ01118 1682 aa0.52□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 UBR1Q8IWV7 1749 aa0.52□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 ROS1P08922 2347 aa0.52□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 TEP1Q99973 2627 aaKnown RBP0.51□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 SETXQ7Z333 2677 aaKnown RBP0.51□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 NBDYA0A0U1RRE5 68 aa0.51□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 NUPR2A6NF83 97 aa0.51□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 M0R129 80 aa0.51□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 M0R2Z0 102 aa0.51□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 YPEL1O60688 119 aa0.51□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 SMIM24O75264 130 aa0.51□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 KRTAP10-4P60372 401 aaPredicted RBP0.51□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 ARHGAP5Q13017 1502 aa0.51□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 MPV17LQ2QL34 196 aa0.51□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 CLLU1Q5K131 121 aa0.51□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 LINC01545Q5VT33 79 aa0.51□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 MIC13Q5XKP0 118 aa0.51□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 Q6ZS92 163 aa0.51□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 LINC00299Q6ZSB3 139 aa0.51□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 SBF2Q86WG5 1849 aa0.51□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 TCTEX1D1Q8N7M0 179 aa0.51□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 ZNF436-AS1Q8NC38 126 aaPredicted RBP0.51□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 VSTM2AQ8TAG5 236 aa0.51□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 RB1CC1Q8TDY2 1594 aa0.51□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 ZNF431Q8TF32 576 aaPredicted RBP0.51□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 C4orf3Q8WVX3 66 aa0.51□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 ARAP2Q8WZ64 1704 aa0.51□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 C14orf144Q96I85 54 aa0.51□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 STAB1Q9NY15 2570 aa0.51□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 CCDC167Q9P0B6 97 aa0.51□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 ORMDL1Q9P0S3 153 aa0.51□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 BOKQ9UMX3 212 aaPredicted RBP0.51□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 RAPGEF2Q9Y4G8 1499 aa0.51□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 TECTAO75443 2155 aa0.5□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 TCHHQ07283 1943 aa0.5□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 LAMA4Q16363 1823 aa0.5□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 RBBP6Q7Z6E9 1792 aaKnown RBP0.5□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 KDM5AP29375 1690 aaKnown RBP0.5□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 ADGRL2O95490 1459 aa0.5□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 IFT140Q96RY7 1462 aa0.5□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 ZNF609O15014 1411 aa0.5□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 MAST4O15021 2626 aa0.5□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 FAM92AA1XBS5 289 aa0.5□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 CLPSL1A2RUU4 121 aa0.5□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 K7ERU9 68 aa0.5□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 EDF1O60869 148 aaKnown RBP0.5□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 CD2P06729 351 aa0.5□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 PYYP10082 97 aa0.5□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 GUCA1AP43080 201 aaPredicted RBP0.5□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 PCBD1P61457 104 aa0.5□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 CSAG1Q6PB30 78 aa0.5□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 SLC25A26Q70HW3 274 aa0.5□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 CLECL1Q8IZS7 167 aa0.5□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 Q8N8P6 123 aa0.5□□□□□ -2.33
NPHP3-ACAD11-202ENST00000632629 PPDPFLQ8WWR9 84 aa0.5□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms