RNA–Protein interactions for RNA: ENST00000621399.1

CIRBP-245, Transcript of cold inducible RNA binding protein, humanhuman

TSL 1 (best)

Gene CIRBP, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-245ENST00000621399 SMDT1Q9H4I9 107 aa13.07□□□□□ -0.32
CIRBP-245ENST00000621399 C19orf71A6NCJ1 209 aa13.06□□□□□ -0.32
CIRBP-245ENST00000621399 C9JQL5 133 aa13.06□□□□□ -0.32
CIRBP-245ENST00000621399 PTH2Q96A98 100 aa13.06□□□□□ -0.32
CIRBP-245ENST00000621399 K7EN84 100 aa13.05□□□□□ -0.32
CIRBP-245ENST00000621399 P01737 135 aa13.05□□□□□ -0.32
CIRBP-245ENST00000621399 OR4C5Q8NGB2 326 aa13.05□□□□□ -0.32
CIRBP-245ENST00000621399 OR2D3Q8NGH3 330 aa13.05□□□□□ -0.32
CIRBP-245ENST00000621399 TRAV26-1A0A087WT03 109 aa13.04□□□□□ -0.32
CIRBP-245ENST00000621399 CXCL1P09341 107 aa13.04□□□□□ -0.32
CIRBP-245ENST00000621399 SFTA3P0C7M3 94 aa13.04□□□□□ -0.32
CIRBP-245ENST00000621399 RPS20P60866 119 aaKnown RBP13.04□□□□□ -0.32
CIRBP-245ENST00000621399 SYT8Q8NBV8 401 aa13.04□□□□□ -0.32
CIRBP-245ENST00000621399 NUDT10Q8NFP7 164 aa13.04□□□□□ -0.32
CIRBP-245ENST00000621399 NUDT11Q96G61 164 aa13.04□□□□□ -0.32
CIRBP-245ENST00000621399 ZNF479Q96JC4 524 aa13.04□□□□□ -0.32
CIRBP-245ENST00000621399 PHLDA3Q9Y5J5 127 aa13.04□□□□□ -0.32
CIRBP-245ENST00000621399 LY96Q9Y6Y9 160 aa13.04□□□□□ -0.32
CIRBP-245ENST00000621399 TRAV4A0A0B4J268 109 aa13.03□□□□□ -0.32
CIRBP-245ENST00000621399 A0A0J9YY99 117 aa13.03□□□□□ -0.32
CIRBP-245ENST00000621399 FAM74A3Q4VXF1 159 aa13.03□□□□□ -0.32
CIRBP-245ENST00000621399 POM121L12Q8N7R1 296 aa13.03□□□□□ -0.32
CIRBP-245ENST00000621399 SCRT2Q9NQ03 307 aa13.03□□□□□ -0.32
CIRBP-245ENST00000621399 TRGV4A0A0C4DH28 118 aa13.02□□□□□ -0.33
CIRBP-245ENST00000621399 LCE6AA0A183 80 aa13.02□□□□□ -0.33
CIRBP-245ENST00000621399 MED14OSP0DP75 135 aa13.02□□□□□ -0.33
CIRBP-245ENST00000621399 FHL2Q14192 279 aa13.02□□□□□ -0.33
CIRBP-245ENST00000621399 DMRTA1Q5VZB9 504 aa13.02□□□□□ -0.33
CIRBP-245ENST00000621399 C15orf53Q8NAA6 179 aa13.02□□□□□ -0.33
CIRBP-245ENST00000621399 RNASE7Q9H1E1 156 aaKnown RBP13.02□□□□□ -0.33
CIRBP-245ENST00000621399 XKRY2A2RUG3 117 aa13.01□□□□□ -0.33
CIRBP-245ENST00000621399 M0R381 172 aa13.01□□□□□ -0.33
CIRBP-245ENST00000621399 RS1O15537 224 aa13.01□□□□□ -0.33
CIRBP-245ENST00000621399 NUDT3O95989 172 aa13.01□□□□□ -0.33
CIRBP-245ENST00000621399 GZMBP10144 247 aa13.01□□□□□ -0.33
CIRBP-245ENST00000621399 SLAQ13239 276 aa13.01□□□□□ -0.33
CIRBP-245ENST00000621399 TMEM241Q24JQ0 296 aa13.01□□□□□ -0.33
CIRBP-245ENST00000621399 PIK3CD-AS1Q5SR53 167 aa13.01□□□□□ -0.33
CIRBP-245ENST00000621399 CFAP126Q5VTH2 177 aa13.01□□□□□ -0.33
CIRBP-245ENST00000621399 LINC01551Q86U37 167 aa13.01□□□□□ -0.33
CIRBP-245ENST00000621399 HHLA3Q9XRX5 114 aa13.01□□□□□ -0.33
CIRBP-245ENST00000621399 LY6G6CO95867 125 aa13□□□□□ -0.33
CIRBP-245ENST00000621399 SOHLH1Q5JUK2 328 aa13□□□□□ -0.33
CIRBP-245ENST00000621399 ZFP82Q8N141 532 aa13□□□□□ -0.33
CIRBP-245ENST00000621399 LINC00476Q8WZB0 136 aa13□□□□□ -0.33
CIRBP-245ENST00000621399 TPPP3Q9BW30 176 aa13□□□□□ -0.33
CIRBP-245ENST00000621399 RPP21Q9H633 154 aaKnown RBP13□□□□□ -0.33
CIRBP-245ENST00000621399 PRO0255Q9UI72 69 aa13□□□□□ -0.33
CIRBP-245ENST00000621399 ALMS1Q8TCU4 4167 aa12.99□□□□□ -0.33
CIRBP-245ENST00000621399 A8MWV9 139 aa12.99□□□□□ -0.33
CIRBP-245ENST00000621399 PAX4O43316 350 aa12.99□□□□□ -0.33
CIRBP-245ENST00000621399 ERVFC1-1P60608 527 aa12.99□□□□□ -0.33
CIRBP-245ENST00000621399 SSBP4Q9BWG4 385 aaPredicted RBP12.99□□□□□ -0.33
CIRBP-245ENST00000621399 DNAH1Q9P2D7 4330 aa12.99□□□□□ -0.33
CIRBP-245ENST00000621399 SACSQ9NZJ4 4579 aa12.98□□□□□ -0.33
CIRBP-245ENST00000621399 IGHV3-73A0A0B4J1V6 119 aa12.98□□□□□ -0.33
CIRBP-245ENST00000621399 H3BNG1 76 aa12.98□□□□□ -0.33
CIRBP-245ENST00000621399 SNAI2O43623 268 aa12.98□□□□□ -0.33
CIRBP-245ENST00000621399 CIDEAO60543 219 aa12.98□□□□□ -0.33
CIRBP-245ENST00000621399 OR5AL1P0C617 328 aa12.98□□□□□ -0.33
CIRBP-245ENST00000621399 CRYBA4P53673 196 aa12.98□□□□□ -0.33
CIRBP-245ENST00000621399 LGALS9CQ6DKI2 356 aa12.98□□□□□ -0.33
CIRBP-245ENST00000621399 FAM231DQ6ZW35 169 aa12.98□□□□□ -0.33
CIRBP-245ENST00000621399 FER1L6-AS1Q8NA97 138 aa12.98□□□□□ -0.33
CIRBP-245ENST00000621399 OR10AG1Q8NH19 301 aa12.98□□□□□ -0.33
CIRBP-245ENST00000621399 VSIG2Q96IQ7 327 aa12.98□□□□□ -0.33
CIRBP-245ENST00000621399 NAT8Q9UHE5 227 aa12.98□□□□□ -0.33
CIRBP-245ENST00000621399 MUC21A0A0G2JKD1 596 aa12.97□□□□□ -0.33
CIRBP-245ENST00000621399 MUC21A0A140T8X8 626 aa12.97□□□□□ -0.33
CIRBP-245ENST00000621399 GATCO43716 136 aaKnown RBP12.97□□□□□ -0.33
CIRBP-245ENST00000621399 SSTP61278 116 aa12.97□□□□□ -0.33
CIRBP-245ENST00000621399 SPANXN1Q5VSR9 72 aa12.97□□□□□ -0.33
CIRBP-245ENST00000621399 JPT2Q9H910 190 aa12.97□□□□□ -0.33
CIRBP-245ENST00000621399 MUC4Q99102 2169 aa12.97□□□□□ -0.33
CIRBP-245ENST00000621399 RYR2Q92736 4967 aa12.96□□□□□ -0.33
CIRBP-245ENST00000621399 IGLC6P0CF74 106 aa12.96□□□□□ -0.33
CIRBP-245ENST00000621399 P0DMU3 169 aa12.96□□□□□ -0.33
CIRBP-245ENST00000621399 FAM231AP0DMU4 169 aa12.96□□□□□ -0.33
CIRBP-245ENST00000621399 FAM231CP0DMU5 169 aa12.96□□□□□ -0.33
CIRBP-245ENST00000621399 SFRP2Q96HF1 295 aa12.96□□□□□ -0.33
CIRBP-245ENST00000621399 LYSTQ99698 3801 aa12.96□□□□□ -0.33
CIRBP-245ENST00000621399 A0A1W2PPQ1 181 aa12.95□□□□□ -0.34
CIRBP-245ENST00000621399 GATA1P15976 413 aaPredicted RBP12.95□□□□□ -0.34
CIRBP-245ENST00000621399 RPL23P62829 140 aaKnown RBP12.95□□□□□ -0.34
CIRBP-245ENST00000621399 ADIRFQ15847 76 aa12.95□□□□□ -0.34
CIRBP-245ENST00000621399 ZFP2Q6ZN57 461 aa12.95□□□□□ -0.34
CIRBP-245ENST00000621399 SAMD10Q9BYL1 202 aa12.95□□□□□ -0.34
CIRBP-245ENST00000621399 A0A087WWL8 130 aa12.94□□□□□ -0.34
CIRBP-245ENST00000621399 F2Z2F3 143 aa12.94□□□□□ -0.34
CIRBP-245ENST00000621399 NXPH4O95158 308 aa12.94□□□□□ -0.34
CIRBP-245ENST00000621399 RHODO00212 210 aa12.93□□□□□ -0.34
CIRBP-245ENST00000621399 FAM74A4Q5TZK3 123 aa12.93□□□□□ -0.34
CIRBP-245ENST00000621399 LYZL1Q6UWQ5 148 aa12.93□□□□□ -0.34
CIRBP-245ENST00000621399 UBE2DNLQ8IWF7 75 aa12.93□□□□□ -0.34
CIRBP-245ENST00000621399 C15orf54Q8N8G6 183 aa12.93□□□□□ -0.34
CIRBP-245ENST00000621399 ISOC2Q96AB3 205 aa12.93□□□□□ -0.34
CIRBP-245ENST00000621399 OSTCQ9NRP0 149 aa12.93□□□□□ -0.34
CIRBP-245ENST00000621399 ICOSQ9Y6W8 199 aa12.93□□□□□ -0.34
CIRBP-245ENST00000621399 VPS13DQ5THJ4 4388 aa12.93□□□□□ -0.34
CIRBP-245ENST00000621399 A0A096LPF7 62 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 115.7 ms