RNA–Protein interactions for RNA: ENST00000620882.4

LRRC39-204, Transcript of leucine rich repeat containing 39, humanhuman

TSL 5 BASIC

Gene LRRC39, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39-204ENST00000620882 TRAPPC1Q9Y5R8 145 aa2.16□□□□□ -2.06
LRRC39-204ENST00000620882 EPRSP07814 1512 aaKnown RBP2.15□□□□□ -2.06
LRRC39-204ENST00000620882 LRP5O75197 1615 aa2.15□□□□□ -2.06
LRRC39-204ENST00000620882 SMARCA4P51532 1647 aa2.15□□□□□ -2.06
LRRC39-204ENST00000620882 MARF1Q9Y4F3 1742 aaKnown RBP2.15□□□□□ -2.06
LRRC39-204ENST00000620882 LTN1O94822 1766 aa2.15□□□□□ -2.06
LRRC39-204ENST00000620882 ZFHX2Q9C0A1 2572 aaPredicted RBP2.15□□□□□ -2.07
LRRC39-204ENST00000620882 IGHV1-18A0A0C4DH31 117 aa2.15□□□□□ -2.07
LRRC39-204ENST00000620882 J3QLW9 94 aa2.15□□□□□ -2.07
LRRC39-204ENST00000620882 NFYAP23511 347 aaPredicted RBP2.15□□□□□ -2.07
LRRC39-204ENST00000620882 FAUP35544 74 aaKnown RBP2.15□□□□□ -2.07
LRRC39-204ENST00000620882 C9orf163Q8N9P6 203 aa2.15□□□□□ -2.07
LRRC39-204ENST00000620882 Q8TAT8 98 aa2.15□□□□□ -2.07
LRRC39-204ENST00000620882 COPS9Q8WXC6 57 aa2.15□□□□□ -2.07
LRRC39-204ENST00000620882 LY96Q9Y6Y9 160 aa2.15□□□□□ -2.07
LRRC39-204ENST00000620882 BAZ2BQ9UIF8 2168 aaKnown RBP2.15□□□□□ -2.07
LRRC39-204ENST00000620882 ZGRF1Q86YA3 2104 aa2.15□□□□□ -2.07
LRRC39-204ENST00000620882 IGLV2-18A0A075B6J9 118 aa2.14□□□□□ -2.07
LRRC39-204ENST00000620882 IGKCP01834 107 aa2.14□□□□□ -2.07
LRRC39-204ENST00000620882 IGLV7-43P04211 117 aa2.14□□□□□ -2.07
LRRC39-204ENST00000620882 RHOHQ15669 191 aa2.14□□□□□ -2.07
LRRC39-204ENST00000620882 LY6EQ16553 131 aa2.14□□□□□ -2.07
LRRC39-204ENST00000620882 C5orf38Q86SI9 138 aa2.14□□□□□ -2.07
LRRC39-204ENST00000620882 S100A16Q96FQ6 103 aaKnown RBP2.14□□□□□ -2.07
LRRC39-204ENST00000620882 SPANXDQ9BXN6 97 aa2.14□□□□□ -2.07
LRRC39-204ENST00000620882 SCAPERQ9BY12 1400 aa2.14□□□□□ -2.07
LRRC39-204ENST00000620882 SCAF11Q99590 1463 aaKnown RBP2.14□□□□□ -2.07
LRRC39-204ENST00000620882 FYCO1Q9BQS8 1478 aa2.14□□□□□ -2.07
LRRC39-204ENST00000620882 DISP1Q96F81 1524 aa2.14□□□□□ -2.07
LRRC39-204ENST00000620882 PATJQ8NI35 1801 aa2.14□□□□□ -2.07
LRRC39-204ENST00000620882 SPTBP11277 2137 aa2.14□□□□□ -2.07
LRRC39-204ENST00000620882 COL11A1P12107 1806 aaPredicted RBP2.14□□□□□ -2.07
LRRC39-204ENST00000620882 RTEL1-TNFRSF6BF6WH68 1400 aa2.14□□□□□ -2.07
LRRC39-204ENST00000620882 A0A1B0GU33 70 aa2.14□□□□□ -2.07
LRRC39-204ENST00000620882 UBE2L5PA0A1B0GUS4 154 aa2.14□□□□□ -2.07
LRRC39-204ENST00000620882 IBA57-AS1B1ANH7 110 aa2.14□□□□□ -2.07
LRRC39-204ENST00000620882 IGHV3-53P01767 116 aa2.14□□□□□ -2.07
LRRC39-204ENST00000620882 ASAH2BP0C7U1 165 aa2.14□□□□□ -2.07
LRRC39-204ENST00000620882 UBE2L3P68036 154 aaKnown RBP2.14□□□□□ -2.07
LRRC39-204ENST00000620882 WFDC2Q14508 124 aa2.14□□□□□ -2.07
LRRC39-204ENST00000620882 LGALSLQ3ZCW2 172 aaPredicted RBP2.14□□□□□ -2.07
LRRC39-204ENST00000620882 LYPD5Q6UWN5 251 aa2.14□□□□□ -2.07
LRRC39-204ENST00000620882 SPTSSBQ8NFR3 76 aa2.14□□□□□ -2.07
LRRC39-204ENST00000620882 UQCR10Q9UDW1 63 aa2.14□□□□□ -2.07
LRRC39-204ENST00000620882 ABCC3O15438 1527 aa2.13□□□□□ -2.07
LRRC39-204ENST00000620882 CDK13Q14004 1512 aaKnown RBP2.13□□□□□ -2.07
LRRC39-204ENST00000620882 TRAV14DV4A0A0A6YYC5 116 aa2.13□□□□□ -2.07
LRRC39-204ENST00000620882 F8W1H4 67 aa2.13□□□□□ -2.07
LRRC39-204ENST00000620882 MIR22HGQ0VDD5 57 aa2.13□□□□□ -2.07
LRRC39-204ENST00000620882 ETDBQ3ZM63 59 aa2.13□□□□□ -2.07
LRRC39-204ENST00000620882 TOPAZ1Q8N9V7 1692 aa2.13□□□□□ -2.07
LRRC39-204ENST00000620882 SHROOM2Q13796 1616 aa2.13□□□□□ -2.07
LRRC39-204ENST00000620882 IQGAP3Q86VI3 1631 aa2.13□□□□□ -2.07
LRRC39-204ENST00000620882 NLRP1Q9C000 1473 aa2.13□□□□□ -2.07
LRRC39-204ENST00000620882 IGLV4-60A0A075B6I1 120 aa2.12□□□□□ -2.07
LRRC39-204ENST00000620882 G3V3Q6 166 aa2.12□□□□□ -2.07
LRRC39-204ENST00000620882 RNASE2P10153 161 aaKnown RBP2.12□□□□□ -2.07
LRRC39-204ENST00000620882 FXYD2P54710 66 aa2.12□□□□□ -2.07
LRRC39-204ENST00000620882 ZNF345Q14585 488 aa2.12□□□□□ -2.07
LRRC39-204ENST00000620882 KRTAP13-2Q52LG2 175 aa2.12□□□□□ -2.07
LRRC39-204ENST00000620882 Q6ZS52 159 aa2.12□□□□□ -2.07
LRRC39-204ENST00000620882 Q96M85 177 aa2.12□□□□□ -2.07
LRRC39-204ENST00000620882 OR8B2Q96RD0 313 aa2.12□□□□□ -2.07
LRRC39-204ENST00000620882 SCRT1Q9BWW7 348 aa2.12□□□□□ -2.07
LRRC39-204ENST00000620882 HIGD1BQ9P298 99 aa2.12□□□□□ -2.07
LRRC39-204ENST00000620882 ABCA4P78363 2273 aa2.12□□□□□ -2.07
LRRC39-204ENST00000620882 MADDQ8WXG6 1647 aa2.12□□□□□ -2.07
LRRC39-204ENST00000620882 LAMC3Q9Y6N6 1575 aa2.12□□□□□ -2.07
LRRC39-204ENST00000620882 TANC1Q9C0D5 1861 aa2.12□□□□□ -2.07
LRRC39-204ENST00000620882 RIC1Q4ADV7 1423 aa2.12□□□□□ -2.07
LRRC39-204ENST00000620882 IGKV2-28A0A075B6P5 120 aa2.12□□□□□ -2.07
LRRC39-204ENST00000620882 TRAV17A0A0B4J275 112 aa2.12□□□□□ -2.07
LRRC39-204ENST00000620882 IGKV2D-28P01615 120 aa2.12□□□□□ -2.07
LRRC39-204ENST00000620882 ADCYAP1P18509 176 aa2.12□□□□□ -2.07
LRRC39-204ENST00000620882 LSM3P62310 102 aaKnown RBP2.12□□□□□ -2.07
LRRC39-204ENST00000620882 ZNF791Q3KP31 576 aaPredicted RBP2.12□□□□□ -2.07
LRRC39-204ENST00000620882 S100A13Q99584 98 aa2.12□□□□□ -2.07
LRRC39-204ENST00000620882 SMCO4Q9NRQ5 59 aa2.12□□□□□ -2.07
LRRC39-204ENST00000620882 R4GN34 69 aa2.12□□□□□ -2.07
LRRC39-204ENST00000620882 PXDNLA1KZ92 1463 aa2.11□□□□□ -2.07
LRRC39-204ENST00000620882 POLA1P09884 1462 aaPredicted RBP2.11□□□□□ -2.07
LRRC39-204ENST00000620882 PTPRMP28827 1452 aa2.11□□□□□ -2.07
LRRC39-204ENST00000620882 GAPVD1Q14C86 1478 aa2.11□□□□□ -2.07
LRRC39-204ENST00000620882 SHANK2Q9UPX8 1470 aa2.11□□□□□ -2.07
LRRC39-204ENST00000620882 UACAQ9BZF9 1416 aa2.11□□□□□ -2.07
LRRC39-204ENST00000620882 CR1P17927 2039 aa2.11□□□□□ -2.07
LRRC39-204ENST00000620882 TRAV40A0A0B4J280 105 aa2.11□□□□□ -2.07
LRRC39-204ENST00000620882 TRBV7-7A0A0K0K1E9 115 aa2.11□□□□□ -2.07
LRRC39-204ENST00000620882 SSSCA1O60232 199 aa2.11□□□□□ -2.07
LRRC39-204ENST00000620882 CFDP00746 253 aaPredicted RBP2.11□□□□□ -2.07
LRRC39-204ENST00000620882 IGLC2P0DOY2 106 aa2.11□□□□□ -2.07
LRRC39-204ENST00000620882 IGLC3P0DOY3 106 aa2.11□□□□□ -2.07
LRRC39-204ENST00000620882 OR8B3Q8NGG8 313 aa2.11□□□□□ -2.07
LRRC39-204ENST00000620882 DYNLRB2Q8TF09 96 aa2.11□□□□□ -2.07
LRRC39-204ENST00000620882 SMIM7Q9BQ49 75 aa2.11□□□□□ -2.07
LRRC39-204ENST00000620882 BPESC1Q9GZL8 116 aa2.11□□□□□ -2.07
LRRC39-204ENST00000620882 CYTL1Q9NRR1 136 aa2.11□□□□□ -2.07
LRRC39-204ENST00000620882 SPCS1Q9Y6A9 102 aa2.11□□□□□ -2.07
LRRC39-204ENST00000620882 MDC1Q14676 2089 aaKnown RBP2.11□□□□□ -2.07
LRRC39-204ENST00000620882 PPRC1Q5VV67 1664 aaKnown RBP2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms