RNA–Protein interactions for RNA: ENST00000618939.4

CNOT3-210, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 5

Gene CNOT3, Length 4,516 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-210ENST00000618939 CEND1Q8N111 149 aa10.72□□□□□ -0.69
CNOT3-210ENST00000618939 WNK1Q9H4A3 2382 aa10.72□□□□□ -0.69
CNOT3-210ENST00000618939 I3L3M4 83 aa10.72□□□□□ -0.69
CNOT3-210ENST00000618939 ELANEP08246 267 aa10.72□□□□□ -0.69
CNOT3-210ENST00000618939 K7ERJ3 54 aa10.72□□□□□ -0.69
CNOT3-210ENST00000618939 C10orf105Q8TEF2 133 aa10.72□□□□□ -0.69
CNOT3-210ENST00000618939 PRSS29PA6NIE9 313 aa10.71□□□□□ -0.69
CNOT3-210ENST00000618939 K7EMI3 77 aa10.71□□□□□ -0.69
CNOT3-210ENST00000618939 TAL2Q16559 108 aa10.71□□□□□ -0.69
CNOT3-210ENST00000618939 Q5PR19 223 aa10.71□□□□□ -0.69
CNOT3-210ENST00000618939 NPC2P61916 151 aa10.71□□□□□ -0.69
CNOT3-210ENST00000618939 LOXL1Q08397 574 aaPredicted RBP10.71□□□□□ -0.69
CNOT3-210ENST00000618939 RPL39LQ96EH5 51 aaKnown RBP10.71□□□□□ -0.69
CNOT3-210ENST00000618939 CHD9Q3L8U1 2897 aa10.71□□□□□ -0.7
CNOT3-210ENST00000618939 PRRC2CQ9Y520 2896 aaKnown RBP10.71□□□□□ -0.7
CNOT3-210ENST00000618939 ADARB2-AS1A8MUL3 147 aa10.71□□□□□ -0.7
CNOT3-210ENST00000618939 LINC01619G3V211 115 aa10.71□□□□□ -0.7
CNOT3-210ENST00000618939 RHODO00212 210 aa10.71□□□□□ -0.7
CNOT3-210ENST00000618939 ANKRD11Q6UB99 2663 aaPredicted RBP10.71□□□□□ -0.7
CNOT3-210ENST00000618939 M0R2P5 195 aa10.7□□□□□ -0.7
CNOT3-210ENST00000618939 TRBV25-1A0A075B6N4 114 aa10.7□□□□□ -0.7
CNOT3-210ENST00000618939 LMO4P61968 165 aa10.7□□□□□ -0.7
CNOT3-210ENST00000618939 ATP6V0BQ99437 205 aa10.7□□□□□ -0.7
CNOT3-210ENST00000618939 CMC4P56277 68 aaPredicted RBP10.7□□□□□ -0.7
CNOT3-210ENST00000618939 CCDC140Q96MF4 163 aa10.7□□□□□ -0.7
CNOT3-210ENST00000618939 XCL2Q9UBD3 114 aa10.7□□□□□ -0.7
CNOT3-210ENST00000618939 MORN3Q6PF18 240 aaPredicted RBP10.7□□□□□ -0.7
CNOT3-210ENST00000618939 CHCHD5Q9BSY4 110 aa10.7□□□□□ -0.7
CNOT3-210ENST00000618939 RANBP2P49792 3224 aaKnown RBP10.7□□□□□ -0.7
CNOT3-210ENST00000618939 SPATA12Q7Z6I5 190 aa10.69□□□□□ -0.7
CNOT3-210ENST00000618939 MTURNQ8N3F0 131 aa10.69□□□□□ -0.7
CNOT3-210ENST00000618939 LINC01548A6NM66 108 aa10.69□□□□□ -0.7
CNOT3-210ENST00000618939 RNF114Q9Y508 228 aa10.69□□□□□ -0.7
CNOT3-210ENST00000618939 ADAMTS20P59510 1910 aa10.69□□□□□ -0.7
CNOT3-210ENST00000618939 DEFB1P60022 68 aa10.69□□□□□ -0.7
CNOT3-210ENST00000618939 NSUN5P1Q3KNT7 163 aa10.69□□□□□ -0.7
CNOT3-210ENST00000618939 UNQ9165/PRO28630Q6UXU0 137 aa10.68□□□□□ -0.7
CNOT3-210ENST00000618939 TTTY13Q9BZ97 58 aa10.68□□□□□ -0.7
CNOT3-210ENST00000618939 TAX1BP3O14907 124 aa10.68□□□□□ -0.7
CNOT3-210ENST00000618939 CRIP1P50238 77 aa10.68□□□□□ -0.7
CNOT3-210ENST00000618939 LINC00310P59036 64 aa10.68□□□□□ -0.7
CNOT3-210ENST00000618939 ETDBQ3ZM63 59 aa10.68□□□□□ -0.7
CNOT3-210ENST00000618939 VPREB3Q9UKI3 123 aa10.68□□□□□ -0.7
CNOT3-210ENST00000618939 MKI67P46013 3256 aaKnown RBP10.68□□□□□ -0.7
CNOT3-210ENST00000618939 TRBV7-9A0A0J9YWB2 115 aa10.68□□□□□ -0.7
CNOT3-210ENST00000618939 SRSF2Q01130 221 aaKnown RBP10.68□□□□□ -0.7
CNOT3-210ENST00000618939 EBI3Q14213 229 aa10.68□□□□□ -0.7
CNOT3-210ENST00000618939 GTSF1LQ9H1H1 148 aa10.68□□□□□ -0.7
CNOT3-210ENST00000618939 MYO9AB2RTY4 2548 aa10.67□□□□□ -0.7
CNOT3-210ENST00000618939 TNFRSF13BO14836 293 aaPredicted RBP10.67□□□□□ -0.7
CNOT3-210ENST00000618939 IGLV2-11P01706 119 aa10.67□□□□□ -0.7
CNOT3-210ENST00000618939 IGHG2P01859 326 aa10.67□□□□□ -0.7
CNOT3-210ENST00000618939 IGLC6P0CF74 106 aa10.67□□□□□ -0.7
CNOT3-210ENST00000618939 HOXD3P31249 432 aaPredicted RBP10.67□□□□□ -0.7
CNOT3-210ENST00000618939 BOD1L2Q8IYS8 172 aa10.67□□□□□ -0.7
CNOT3-210ENST00000618939 NAV2Q8IVL1 2488 aa10.67□□□□□ -0.7
CNOT3-210ENST00000618939 IGHV3-16A0A0C4DH30 117 aa10.67□□□□□ -0.7
CNOT3-210ENST00000618939 RPL35AP18077 110 aaKnown RBP10.67□□□□□ -0.7
CNOT3-210ENST00000618939 C12orf74Q32Q52 190 aa10.67□□□□□ -0.7
CNOT3-210ENST00000618939 TRAV13-1A0A0B4J241 112 aa10.66□□□□□ -0.7
CNOT3-210ENST00000618939 TRBV12-3P01733 135 aa10.66□□□□□ -0.7
CNOT3-210ENST00000618939 FOXI2Q6ZQN5 318 aa10.66□□□□□ -0.7
CNOT3-210ENST00000618939 RASL10AQ92737 203 aa10.66□□□□□ -0.7
CNOT3-210ENST00000618939 Q96MF0 132 aa10.66□□□□□ -0.7
CNOT3-210ENST00000618939 LGALS1P09382 135 aaKnown RBP10.66□□□□□ -0.7
CNOT3-210ENST00000618939 BRCA2P51587 3418 aa10.66□□□□□ -0.7
CNOT3-210ENST00000618939 J3QQQ9 107 aa10.66□□□□□ -0.7
CNOT3-210ENST00000618939 ODF1Q14990 250 aa10.66□□□□□ -0.7
CNOT3-210ENST00000618939 CCDC168Q8NDH2 2452 aa10.65□□□□□ -0.7
CNOT3-210ENST00000618939 C11orf71Q6IPW1 123 aa10.65□□□□□ -0.7
CNOT3-210ENST00000618939 AMTNQ6UX39 209 aa10.65□□□□□ -0.7
CNOT3-210ENST00000618939 H3BMG7 143 aa10.65□□□□□ -0.71
CNOT3-210ENST00000618939 SUMO4Q6EEV6 95 aa10.65□□□□□ -0.71
CNOT3-210ENST00000618939 C2CD3Q4AC94 2353 aa10.64□□□□□ -0.71
CNOT3-210ENST00000618939 F8W1H4 67 aa10.64□□□□□ -0.71
CNOT3-210ENST00000618939 RNASE1P07998 156 aaKnown RBP10.64□□□□□ -0.71
CNOT3-210ENST00000618939 C1QTNF4Q9BXJ3 329 aa10.64□□□□□ -0.71
CNOT3-210ENST00000618939 TP73-AS1Q9UF72 201 aa10.64□□□□□ -0.71
CNOT3-210ENST00000618939 VWC2LB2RUY7 222 aa10.63□□□□□ -0.71
CNOT3-210ENST00000618939 C9JAW5 83 aa10.63□□□□□ -0.71
CNOT3-210ENST00000618939 HTN3P15516 51 aa10.63□□□□□ -0.71
CNOT3-210ENST00000618939 FXYD2P54710 66 aa10.63□□□□□ -0.71
CNOT3-210ENST00000618939 RHOHQ15669 191 aa10.63□□□□□ -0.71
CNOT3-210ENST00000618939 IGHV3-38A0A0C4DH36 116 aa10.63□□□□□ -0.71
CNOT3-210ENST00000618939 K7EMT4 169 aa10.63□□□□□ -0.71
CNOT3-210ENST00000618939 ATXN8Q156A1 80 aa10.63□□□□□ -0.71
CNOT3-210ENST00000618939 DEFB136Q30KP8 78 aa10.63□□□□□ -0.71
CNOT3-210ENST00000618939 PRIMA1Q86XR5 153 aa10.63□□□□□ -0.71
CNOT3-210ENST00000618939 NRGNQ92686 78 aa10.63□□□□□ -0.71
CNOT3-210ENST00000618939 ZFAND3Q9H8U3 227 aa10.63□□□□□ -0.71
CNOT3-210ENST00000618939 SORL1Q92673 2214 aa10.63□□□□□ -0.71
CNOT3-210ENST00000618939 TRBV20-1A0A075B6N2 111 aa10.63□□□□□ -0.71
CNOT3-210ENST00000618939 NACAE9PAV3 2078 aa10.62□□□□□ -0.71
CNOT3-210ENST00000618939 HIGD1BQ9P298 99 aa10.62□□□□□ -0.71
CNOT3-210ENST00000618939 SMAD5-AS1Q9Y6J3 95 aa10.62□□□□□ -0.71
CNOT3-210ENST00000618939 LINC00158P58513 81 aa10.62□□□□□ -0.71
CNOT3-210ENST00000618939 ZFP2Q6ZN57 461 aa10.62□□□□□ -0.71
CNOT3-210ENST00000618939 RNASE8Q8TDE3 154 aaKnown RBP10.62□□□□□ -0.71
CNOT3-210ENST00000618939 TSPAN13O95857 204 aa10.62□□□□□ -0.71
CNOT3-210ENST00000618939 MED14OSP0DP75 135 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 111.9 ms