RNA–Protein interactions for RNA: ENST00000618411.4

SRRT-217, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,893 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-217ENST00000618411 IGHV3-66A0A0C4DH42 116 aa11.46□□□□□ -0.58
SRRT-217ENST00000618411 J3QQQ9 107 aa11.46□□□□□ -0.58
SRRT-217ENST00000618411 GPHB5Q86YW7 130 aa11.46□□□□□ -0.58
SRRT-217ENST00000618411 SMIM20Q8N5G0 67 aa11.46□□□□□ -0.58
SRRT-217ENST00000618411 TMEM263Q8WUH6 116 aaKnown RBP11.46□□□□□ -0.58
SRRT-217ENST00000618411 MGPP08493 103 aa11.45□□□□□ -0.58
SRRT-217ENST00000618411 S100A4P26447 101 aaKnown RBP11.45□□□□□ -0.58
SRRT-217ENST00000618411 EMP1P54849 157 aa11.45□□□□□ -0.58
SRRT-217ENST00000618411 ATXN8Q156A1 80 aa11.45□□□□□ -0.58
SRRT-217ENST00000618411 PRR9Q5T870 116 aa11.45□□□□□ -0.58
SRRT-217ENST00000618411 IGFL3Q6UXB1 125 aa11.45□□□□□ -0.58
SRRT-217ENST00000618411 ODF3Q96PU9 254 aa11.45□□□□□ -0.58
SRRT-217ENST00000618411 PHLDA3Q9Y5J5 127 aa11.45□□□□□ -0.58
SRRT-217ENST00000618411 NCOR1O75376 2440 aa11.45□□□□□ -0.58
SRRT-217ENST00000618411 ZFHX4Q86UP3 3567 aa11.45□□□□□ -0.58
SRRT-217ENST00000618411 CLEC3BP05452 202 aa11.45□□□□□ -0.58
SRRT-217ENST00000618411 LINC01620Q4KN68 170 aa11.45□□□□□ -0.58
SRRT-217ENST00000618411 PRR30Q53SZ7 412 aaPredicted RBP11.45□□□□□ -0.58
SRRT-217ENST00000618411 TMEM170BQ5T4T1 132 aa11.45□□□□□ -0.58
SRRT-217ENST00000618411 TP53TG1Q9Y2A0 90 aa11.45□□□□□ -0.58
SRRT-217ENST00000618411 TRAV8-4A0A0B4J246 113 aa11.44□□□□□ -0.58
SRRT-217ENST00000618411 A0A0G2JNJ9 132 aa11.44□□□□□ -0.58
SRRT-217ENST00000618411 LYNX1G3V0Z9 82 aa11.44□□□□□ -0.58
SRRT-217ENST00000618411 LYNX1P0DP58 116 aa11.44□□□□□ -0.58
SRRT-217ENST00000618411 MED14OSP0DP75 135 aa11.44□□□□□ -0.58
SRRT-217ENST00000618411 C15orf32Q32M92 178 aa11.44□□□□□ -0.58
SRRT-217ENST00000618411 Q9UFV3 132 aa11.44□□□□□ -0.58
SRRT-217ENST00000618411 SMG1Q96Q15 3661 aaKnown RBP11.44□□□□□ -0.58
SRRT-217ENST00000618411 CUL9Q8IWT3 2517 aa11.44□□□□□ -0.58
SRRT-217ENST00000618411 LGALS3P17931 250 aaKnown RBP11.44□□□□□ -0.58
SRRT-217ENST00000618411 OR10J6PQ8NGY7 276 aa11.44□□□□□ -0.58
SRRT-217ENST00000618411 TIMM17AQ99595 171 aa11.44□□□□□ -0.58
SRRT-217ENST00000618411 SPENQ96T58 3664 aaKnown RBP11.43□□□□□ -0.58
SRRT-217ENST00000618411 Q8N6K4 173 aa11.43□□□□□ -0.58
SRRT-217ENST00000618411 POM121L12Q8N7R1 296 aa11.43□□□□□ -0.58
SRRT-217ENST00000618411 C15orf53Q8NAA6 179 aa11.43□□□□□ -0.58
SRRT-217ENST00000618411 WDFY4Q6ZS81 3184 aa11.43□□□□□ -0.58
SRRT-217ENST00000618411 TRAV21A0A0B4J279 112 aa11.43□□□□□ -0.58
SRRT-217ENST00000618411 ODF3BA8MYP8 253 aa11.43□□□□□ -0.58
SRRT-217ENST00000618411 EIF4EBP3O60516 100 aaPredicted RBP11.43□□□□□ -0.58
SRRT-217ENST00000618411 IGHV4OR15-8A0A075B7B6 117 aa11.42□□□□□ -0.58
SRRT-217ENST00000618411 IGHV3OR16-13A0A075B7E8 117 aa11.42□□□□□ -0.58
SRRT-217ENST00000618411 A0A087WW49 117 aa11.42□□□□□ -0.58
SRRT-217ENST00000618411 IGHV3-74A0A0B4J1X5 117 aa11.42□□□□□ -0.58
SRRT-217ENST00000618411 B9A039 149 aa11.42□□□□□ -0.58
SRRT-217ENST00000618411 ARL3P36405 182 aa11.42□□□□□ -0.58
SRRT-217ENST00000618411 MRPL23Q16540 153 aaKnown RBP11.42□□□□□ -0.58
SRRT-217ENST00000618411 FAM159AQ6UWV7 190 aa11.42□□□□□ -0.58
SRRT-217ENST00000618411 IGHV7-81A0A0B4J1V7 117 aa11.42□□□□□ -0.58
SRRT-217ENST00000618411 TRBV10-2A0A0K0K1G8 114 aa11.42□□□□□ -0.58
SRRT-217ENST00000618411 KLK9Q2XQG4 91 aa11.42□□□□□ -0.58
SRRT-217ENST00000618411 TMEM95Q3KNT9 176 aa11.42□□□□□ -0.58
SRRT-217ENST00000618411 ZNF876PQ49A33 203 aa11.42□□□□□ -0.58
SRRT-217ENST00000618411 LINC00477Q96M19 166 aa11.42□□□□□ -0.58
SRRT-217ENST00000618411 METTL26Q96S19 204 aa11.42□□□□□ -0.58
SRRT-217ENST00000618411 KLK9Q9UKQ9 250 aa11.42□□□□□ -0.58
SRRT-217ENST00000618411 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.42□□□□□ -0.58
SRRT-217ENST00000618411 SPRY2O43597 315 aa11.42□□□□□ -0.58
SRRT-217ENST00000618411 ZNRF2Q8NHG8 242 aa11.42□□□□□ -0.58
SRRT-217ENST00000618411 FAM110DQ8TAY7 271 aaPredicted RBP11.42□□□□□ -0.58
SRRT-217ENST00000618411 ZFAND2AQ8N6M9 145 aa11.41□□□□□ -0.58
SRRT-217ENST00000618411 TEX49A0A1B0GTD5 131 aa11.41□□□□□ -0.58
SRRT-217ENST00000618411 EBI3Q14213 229 aa11.41□□□□□ -0.58
SRRT-217ENST00000618411 U3KQE9 123 aa11.41□□□□□ -0.58
SRRT-217ENST00000618411 DMXL2Q8TDJ6 3036 aa11.41□□□□□ -0.58
SRRT-217ENST00000618411 POLEQ07864 2286 aa11.4□□□□□ -0.58
SRRT-217ENST00000618411 IGF1P05019 195 aa11.4□□□□□ -0.58
SRRT-217ENST00000618411 POLR2KP53803 58 aaKnown RBP11.4□□□□□ -0.58
SRRT-217ENST00000618411 C16orf92Q96LL3 132 aa11.4□□□□□ -0.58
SRRT-217ENST00000618411 H7C2G1 150 aa11.4□□□□□ -0.58
SRRT-217ENST00000618411 LGALS9O00182 355 aa11.4□□□□□ -0.58
SRRT-217ENST00000618411 MDFICQ9P1T7 246 aa11.4□□□□□ -0.58
SRRT-217ENST00000618411 TRBV30A0A0K0K1B3 111 aa11.39□□□□□ -0.59
SRRT-217ENST00000618411 H3BMM0 161 aa11.39□□□□□ -0.59
SRRT-217ENST00000618411 VCYO14598 125 aa11.39□□□□□ -0.59
SRRT-217ENST00000618411 LEPROTO15243 131 aa11.39□□□□□ -0.59
SRRT-217ENST00000618411 C9orf139Q6ZV77 190 aa11.39□□□□□ -0.59
SRRT-217ENST00000618411 UBE2WQ96B02 151 aa11.39□□□□□ -0.59
SRRT-217ENST00000618411 IGHV3-49A0A0A0MS15 119 aa11.39□□□□□ -0.59
SRRT-217ENST00000618411 M0R1W7 72 aa11.39□□□□□ -0.59
SRRT-217ENST00000618411 MUSTN1Q8IVN3 82 aa11.39□□□□□ -0.59
SRRT-217ENST00000618411 TRAV2A0A0B4J234 112 aa11.38□□□□□ -0.59
SRRT-217ENST00000618411 OOSP1A8MZH6 123 aa11.38□□□□□ -0.59
SRRT-217ENST00000618411 ELANEP08246 267 aa11.38□□□□□ -0.59
SRRT-217ENST00000618411 RPL39P62891 51 aaKnown RBP11.38□□□□□ -0.59
SRRT-217ENST00000618411 TCF15Q12870 199 aa11.38□□□□□ -0.59
SRRT-217ENST00000618411 Q1RN00 199 aa11.38□□□□□ -0.59
SRRT-217ENST00000618411 CLEC19AQ6UXS0 136 aa11.38□□□□□ -0.59
SRRT-217ENST00000618411 ITLN2Q8WWU7 325 aaPredicted RBP11.38□□□□□ -0.59
SRRT-217ENST00000618411 J3KRW8 73 aa11.38□□□□□ -0.59
SRRT-217ENST00000618411 LINC00315P59091 139 aa11.38□□□□□ -0.59
SRRT-217ENST00000618411 CCDC140Q96MF4 163 aa11.38□□□□□ -0.59
SRRT-217ENST00000618411 KIF25-AS1Q9Y6Z4 181 aa11.38□□□□□ -0.59
SRRT-217ENST00000618411 NXPH4O95158 308 aa11.38□□□□□ -0.59
SRRT-217ENST00000618411 IGHV4-39P01824 125 aa11.38□□□□□ -0.59
SRRT-217ENST00000618411 MEIG1Q5JSS6 88 aa11.38□□□□□ -0.59
SRRT-217ENST00000618411 DCHS1Q96JQ0 3298 aa11.37□□□□□ -0.59
SRRT-217ENST00000618411 CEP250Q9BV73 2442 aa11.37□□□□□ -0.59
SRRT-217ENST00000618411 TMEM223A0PJW6 202 aa11.37□□□□□ -0.59
SRRT-217ENST00000618411 RNASE3P12724 160 aaKnown RBP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms