RNA–Protein interactions for RNA: ENST00000617103.4

CLTCL1-209, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,859 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-209ENST00000617103 SLC25A29Q8N8R3 303 aa8.32□□□□□ -1.08
CLTCL1-209ENST00000617103 H0YGX0 51 aa8.32□□□□□ -1.08
CLTCL1-209ENST00000617103 J3KT08 172 aa8.32□□□□□ -1.08
CLTCL1-209ENST00000617103 ZGRF1Q86YA3 2104 aa8.32□□□□□ -1.08
CLTCL1-209ENST00000617103 PCNX2A6NKB5 2137 aa8.32□□□□□ -1.08
CLTCL1-209ENST00000617103 SPRY2O43597 315 aa8.32□□□□□ -1.08
CLTCL1-209ENST00000617103 LHBP01229 141 aa8.32□□□□□ -1.08
CLTCL1-209ENST00000617103 IGFL3Q6UXB1 125 aa8.32□□□□□ -1.08
CLTCL1-209ENST00000617103 CTSZQ9UBR2 303 aa8.32□□□□□ -1.08
CLTCL1-209ENST00000617103 NACAE9PAV3 2078 aa8.32□□□□□ -1.08
CLTCL1-209ENST00000617103 A0A1B0GX51 115 aa8.31□□□□□ -1.08
CLTCL1-209ENST00000617103 H3BUA1 57 aa8.31□□□□□ -1.08
CLTCL1-209ENST00000617103 CRYGCP07315 174 aa8.31□□□□□ -1.08
CLTCL1-209ENST00000617103 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.31□□□□□ -1.08
CLTCL1-209ENST00000617103 IGKV2-29A2NJV5 120 aaPredicted RBP8.31□□□□□ -1.08
CLTCL1-209ENST00000617103 H3BT86 120 aa8.31□□□□□ -1.08
CLTCL1-209ENST00000617103 CTRLP40313 264 aa8.31□□□□□ -1.08
CLTCL1-209ENST00000617103 NKAPP1Q8N9T2 125 aa8.31□□□□□ -1.08
CLTCL1-209ENST00000617103 DENND4AQ7Z401 1863 aa8.31□□□□□ -1.08
CLTCL1-209ENST00000617103 TRBV10-2A0A0K0K1G8 114 aa8.31□□□□□ -1.08
CLTCL1-209ENST00000617103 IGLV2-14P01704 120 aa8.31□□□□□ -1.08
CLTCL1-209ENST00000617103 ARHGAP21Q5T5U3 1957 aa8.31□□□□□ -1.08
CLTCL1-209ENST00000617103 C19orf71A6NCJ1 209 aa8.31□□□□□ -1.08
CLTCL1-209ENST00000617103 FAM215AQ9Y5M1 114 aa8.31□□□□□ -1.08
CLTCL1-209ENST00000617103 COL4A6Q14031 1691 aa8.3□□□□□ -1.08
CLTCL1-209ENST00000617103 TRBV6-1A0A0K0K1D8 114 aa8.3□□□□□ -1.08
CLTCL1-209ENST00000617103 A0A1B0GXF2 115 aa8.3□□□□□ -1.08
CLTCL1-209ENST00000617103 IGLV11-55A0A075B6I3 123 aa8.3□□□□□ -1.08
CLTCL1-209ENST00000617103 TOMM6Q96B49 74 aa8.3□□□□□ -1.08
CLTCL1-209ENST00000617103 C1orf43Q9BWL3 253 aa8.3□□□□□ -1.08
CLTCL1-209ENST00000617103 CTSGP08311 255 aa8.29□□□□□ -1.08
CLTCL1-209ENST00000617103 BAALCQ8WXS3 180 aa8.29□□□□□ -1.08
CLTCL1-209ENST00000617103 F5H768 121 aa8.29□□□□□ -1.08
CLTCL1-209ENST00000617103 TIMM17AQ99595 171 aa8.29□□□□□ -1.08
CLTCL1-209ENST00000617103 BUB3O43684 328 aa8.29□□□□□ -1.08
CLTCL1-209ENST00000617103 NBL1P41271 181 aa8.29□□□□□ -1.08
CLTCL1-209ENST00000617103 DAD1P61803 113 aa8.29□□□□□ -1.08
CLTCL1-209ENST00000617103 THSD7BQ9C0I4 1608 aa8.29□□□□□ -1.08
CLTCL1-209ENST00000617103 GNLYP22749 145 aa8.29□□□□□ -1.08
CLTCL1-209ENST00000617103 PIFOQ8TCI5 191 aa8.29□□□□□ -1.08
CLTCL1-209ENST00000617103 PTH2Q96A98 100 aa8.29□□□□□ -1.08
CLTCL1-209ENST00000617103 ANAPC1Q9H1A4 1944 aa8.29□□□□□ -1.08
CLTCL1-209ENST00000617103 IGKV3D-7A0A0C4DH55 119 aa8.28□□□□□ -1.08
CLTCL1-209ENST00000617103 SND1-IT1Q9HBX3 110 aa8.28□□□□□ -1.08
CLTCL1-209ENST00000617103 ELANEP08246 267 aa8.28□□□□□ -1.08
CLTCL1-209ENST00000617103 TNRC6AQ8NDV7 1962 aaKnown RBP8.28□□□□□ -1.08
CLTCL1-209ENST00000617103 NPBQ8NG41 125 aa8.28□□□□□ -1.08
CLTCL1-209ENST00000617103 YPEL4Q96NS1 127 aa8.28□□□□□ -1.08
CLTCL1-209ENST00000617103 U3KQE9 123 aa8.28□□□□□ -1.08
CLTCL1-209ENST00000617103 C11orf86A6NJI1 115 aa8.28□□□□□ -1.08
CLTCL1-209ENST00000617103 IGFBPL1Q8WX77 278 aa8.28□□□□□ -1.08
CLTCL1-209ENST00000617103 FREM1Q5H8C1 2179 aa8.27□□□□□ -1.08
CLTCL1-209ENST00000617103 ANGP03950 147 aaKnown RBP8.27□□□□□ -1.09
CLTCL1-209ENST00000617103 RPL39P62891 51 aaKnown RBP8.27□□□□□ -1.09
CLTCL1-209ENST00000617103 PRR30Q53SZ7 412 aaPredicted RBP8.27□□□□□ -1.09
CLTCL1-209ENST00000617103 WI2-2373I1.2A0A1W2PRP0 233 aa8.27□□□□□ -1.09
CLTCL1-209ENST00000617103 ODF3L1Q8IXM7 274 aa8.27□□□□□ -1.09
CLTCL1-209ENST00000617103 RNF114Q9Y508 228 aa8.27□□□□□ -1.09
CLTCL1-209ENST00000617103 P0C879 139 aa8.27□□□□□ -1.09
CLTCL1-209ENST00000617103 PRSS33Q8NF86 280 aa8.27□□□□□ -1.09
CLTCL1-209ENST00000617103 ZNF503Q96F45 646 aa8.27□□□□□ -1.09
CLTCL1-209ENST00000617103 IGHV7-81A0A0B4J1V7 117 aa8.26□□□□□ -1.09
CLTCL1-209ENST00000617103 LGALS9O00182 355 aa8.26□□□□□ -1.09
CLTCL1-209ENST00000617103 PSCAO43653 123 aa8.26□□□□□ -1.09
CLTCL1-209ENST00000617103 IGLV2-8P01709 118 aa8.26□□□□□ -1.09
CLTCL1-209ENST00000617103 SPRNQ5BIV9 151 aa8.26□□□□□ -1.09
CLTCL1-209ENST00000617103 Q6ZUT4 128 aa8.26□□□□□ -1.09
CLTCL1-209ENST00000617103 MRPL36Q9P0J6 103 aaKnown RBP8.26□□□□□ -1.09
CLTCL1-209ENST00000617103 HOXD3P31249 432 aaPredicted RBP8.26□□□□□ -1.09
CLTCL1-209ENST00000617103 RITA1Q96K30 269 aa8.26□□□□□ -1.09
CLTCL1-209ENST00000617103 TRAV4A0A0B4J268 109 aa8.26□□□□□ -1.09
CLTCL1-209ENST00000617103 hADV29S1A0JD25 119 aa8.26□□□□□ -1.09
CLTCL1-209ENST00000617103 PRAC2D3DTV9 90 aa8.26□□□□□ -1.09
CLTCL1-209ENST00000617103 RBX1P62877 108 aa8.26□□□□□ -1.09
CLTCL1-209ENST00000617103 Q71RC1 249 aaPredicted RBP8.26□□□□□ -1.09
CLTCL1-209ENST00000617103 NDUFA11Q86Y39 141 aa8.26□□□□□ -1.09
CLTCL1-209ENST00000617103 XCL1P47992 114 aa8.26□□□□□ -1.09
CLTCL1-209ENST00000617103 RNF183Q96D59 192 aa8.26□□□□□ -1.09
CLTCL1-209ENST00000617103 C9orf47Q6ZRZ4 202 aa8.25□□□□□ -1.09
CLTCL1-209ENST00000617103 UBE2DNLQ8IWF7 75 aa8.25□□□□□ -1.09
CLTCL1-209ENST00000617103 NCOA6Q14686 2063 aaPredicted RBP8.25□□□□□ -1.09
CLTCL1-209ENST00000617103 CENPVL3A0A0U1RRI6 287 aa8.25□□□□□ -1.09
CLTCL1-209ENST00000617103 MED14OSP0DP75 135 aa8.25□□□□□ -1.09
CLTCL1-209ENST00000617103 PSMB8P28062 276 aa8.25□□□□□ -1.09
CLTCL1-209ENST00000617103 LOXL1Q08397 574 aaPredicted RBP8.25□□□□□ -1.09
CLTCL1-209ENST00000617103 IGHG2P01859 326 aa8.25□□□□□ -1.09
CLTCL1-209ENST00000617103 C16orf54Q6UWD8 224 aa8.25□□□□□ -1.09
CLTCL1-209ENST00000617103 C5orf38Q86SI9 138 aa8.25□□□□□ -1.09
CLTCL1-209ENST00000617103 C3orf56Q8N813 242 aa8.25□□□□□ -1.09
CLTCL1-209ENST00000617103 WNK1Q9H4A3 2382 aa8.24□□□□□ -1.09
CLTCL1-209ENST00000617103 TNCP24821 2201 aa8.24□□□□□ -1.09
CLTCL1-209ENST00000617103 ATP5G1P05496 136 aa8.24□□□□□ -1.09
CLTCL1-209ENST00000617103 HOXB4P17483 251 aaPredicted RBP8.24□□□□□ -1.09
CLTCL1-209ENST00000617103 GDF5OSQ5U4N7 250 aa8.24□□□□□ -1.09
CLTCL1-209ENST00000617103 NOTCH4Q99466 2003 aa8.24□□□□□ -1.09
CLTCL1-209ENST00000617103 TEX22C9J3V5 150 aa8.24□□□□□ -1.09
CLTCL1-209ENST00000617103 NDUFC2O95298 119 aa8.24□□□□□ -1.09
CLTCL1-209ENST00000617103 IGLV2-23P01705 113 aa8.24□□□□□ -1.09
CLTCL1-209ENST00000617103 LINC00643Q86TS7 51 aa8.24□□□□□ -1.09
CLTCL1-209ENST00000617103 OPRPNQ99935 248 aaPredicted RBP8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms