RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 ZNF80P51504 273 aaPredicted RBP4.37□□□□□ -1.71
SYNCRIP-204ENST00000616122 TTTY13Q9BZ97 58 aa4.37□□□□□ -1.71
SYNCRIP-204ENST00000616122 MRPL35Q9NZE8 188 aaKnown RBP4.37□□□□□ -1.71
SYNCRIP-204ENST00000616122 LENEPQ9Y5L5 61 aa4.37□□□□□ -1.71
SYNCRIP-204ENST00000616122 NCKAP5O14513 1909 aa4.37□□□□□ -1.71
SYNCRIP-204ENST00000616122 ODF3BA8MYP8 253 aa4.37□□□□□ -1.71
SYNCRIP-204ENST00000616122 LGALS9BQ3B8N2 356 aa4.37□□□□□ -1.71
SYNCRIP-204ENST00000616122 CD300EQ496F6 205 aaPredicted RBP4.37□□□□□ -1.71
SYNCRIP-204ENST00000616122 LINC01545Q5VT33 79 aa4.37□□□□□ -1.71
SYNCRIP-204ENST00000616122 LGALS9CQ6DKI2 356 aa4.37□□□□□ -1.71
SYNCRIP-204ENST00000616122 C10orf126Q8N4M7 172 aa4.37□□□□□ -1.71
SYNCRIP-204ENST00000616122 DEFB104AQ8WTQ1 72 aa4.37□□□□□ -1.71
SYNCRIP-204ENST00000616122 SMIM2Q9BVW6 85 aa4.37□□□□□ -1.71
SYNCRIP-204ENST00000616122 WI2-2373I1.2A0A1W2PRP0 233 aa4.36□□□□□ -1.71
SYNCRIP-204ENST00000616122 A6NED7 52 aa4.36□□□□□ -1.71
SYNCRIP-204ENST00000616122 PRB2P02812 416 aaPredicted RBP4.36□□□□□ -1.71
SYNCRIP-204ENST00000616122 COX8AP10176 69 aa4.36□□□□□ -1.71
SYNCRIP-204ENST00000616122 SYNJ2BPP57105 145 aa4.36□□□□□ -1.71
SYNCRIP-204ENST00000616122 DEFB1P60022 68 aa4.36□□□□□ -1.71
SYNCRIP-204ENST00000616122 TMEM238LA0A1B0GVL6 79 aa4.36□□□□□ -1.71
SYNCRIP-204ENST00000616122 A0A1W2PRX2 142 aa4.36□□□□□ -1.71
SYNCRIP-204ENST00000616122 A6NJY4 79 aa4.36□□□□□ -1.71
SYNCRIP-204ENST00000616122 NDUFA4O00483 81 aa4.36□□□□□ -1.71
SYNCRIP-204ENST00000616122 LOXL1Q08397 574 aaPredicted RBP4.36□□□□□ -1.71
SYNCRIP-204ENST00000616122 FOXE3Q13461 319 aa4.36□□□□□ -1.71
SYNCRIP-204ENST00000616122 SPATA12Q7Z6I5 190 aa4.36□□□□□ -1.71
SYNCRIP-204ENST00000616122 SMAD7O15105 426 aaKnown RBP4.36□□□□□ -1.71
SYNCRIP-204ENST00000616122 IGKCP01834 107 aa4.36□□□□□ -1.71
SYNCRIP-204ENST00000616122 LAGE3Q14657 143 aa4.36□□□□□ -1.71
SYNCRIP-204ENST00000616122 SYT8Q8NBV8 401 aa4.36□□□□□ -1.71
SYNCRIP-204ENST00000616122 IGHV3OR16-12A0A075B7B8 117 aa4.36□□□□□ -1.71
SYNCRIP-204ENST00000616122 TRAV12-3A0A0B4J271 114 aa4.36□□□□□ -1.71
SYNCRIP-204ENST00000616122 APOMO95445 188 aa4.36□□□□□ -1.71
SYNCRIP-204ENST00000616122 MYO15AQ9UKN7 3530 aa4.36□□□□□ -1.71
SYNCRIP-204ENST00000616122 FAM223BA6NKX1 122 aa4.35□□□□□ -1.71
SYNCRIP-204ENST00000616122 SMIM13P0DJ93 91 aa4.35□□□□□ -1.71
SYNCRIP-204ENST00000616122 ZNF876PQ49A33 203 aa4.35□□□□□ -1.71
SYNCRIP-204ENST00000616122 FAM223AQ8IWN6 122 aa4.35□□□□□ -1.71
SYNCRIP-204ENST00000616122 DKK2Q9UBU2 259 aa4.35□□□□□ -1.71
SYNCRIP-204ENST00000616122 H7C1H1 209 aa4.35□□□□□ -1.71
SYNCRIP-204ENST00000616122 FSHBP01225 129 aa4.35□□□□□ -1.71
SYNCRIP-204ENST00000616122 IGLV2-11P01706 119 aa4.35□□□□□ -1.71
SYNCRIP-204ENST00000616122 CTRLP40313 264 aa4.35□□□□□ -1.71
SYNCRIP-204ENST00000616122 HOXB4P17483 251 aaPredicted RBP4.35□□□□□ -1.71
SYNCRIP-204ENST00000616122 PCP2Q8IVA1 136 aa4.35□□□□□ -1.71
SYNCRIP-204ENST00000616122 DEFB125Q8N687 156 aa4.35□□□□□ -1.71
SYNCRIP-204ENST00000616122 RAX2Q96IS3 184 aa4.35□□□□□ -1.71
SYNCRIP-204ENST00000616122 TP73-AS1Q9UF72 201 aa4.35□□□□□ -1.71
SYNCRIP-204ENST00000616122 ATG2AQ2TAZ0 1938 aa4.35□□□□□ -1.71
SYNCRIP-204ENST00000616122 IGHV4-30-2A0A087WSY4 118 aa4.35□□□□□ -1.71
SYNCRIP-204ENST00000616122 TRBV6-1A0A0K0K1D8 114 aa4.35□□□□□ -1.71
SYNCRIP-204ENST00000616122 TMEM8BA6NDV4 472 aa4.35□□□□□ -1.71
SYNCRIP-204ENST00000616122 DUSP14O95147 198 aaKnown RBP4.35□□□□□ -1.71
SYNCRIP-204ENST00000616122 CRIP1P50238 77 aa4.35□□□□□ -1.71
SYNCRIP-204ENST00000616122 COTL1Q14019 142 aa4.35□□□□□ -1.71
SYNCRIP-204ENST00000616122 ANXA2RQ3ZCQ2 193 aa4.35□□□□□ -1.71
SYNCRIP-204ENST00000616122 GAGE12BA1L429 117 aa4.35□□□□□ -1.71
SYNCRIP-204ENST00000616122 IGHV4-38-2P0DP08 117 aa4.35□□□□□ -1.71
SYNCRIP-204ENST00000616122 UNQ9165/PRO28630Q6UXU0 137 aa4.35□□□□□ -1.71
SYNCRIP-204ENST00000616122 ZNF479Q96JC4 524 aa4.35□□□□□ -1.71
SYNCRIP-204ENST00000616122 A0A087WWL8 130 aa4.35□□□□□ -1.71
SYNCRIP-204ENST00000616122 SDHAF1A6NFY7 115 aa4.35□□□□□ -1.71
SYNCRIP-204ENST00000616122 TRAV26-2A0A0B4J265 109 aa4.34□□□□□ -1.71
SYNCRIP-204ENST00000616122 RBMY1CP0DJD4 496 aa4.34□□□□□ -1.71
SYNCRIP-204ENST00000616122 SLC25A16P16260 332 aa4.34□□□□□ -1.71
SYNCRIP-204ENST00000616122 KIR3DS1Q14943 382 aa4.34□□□□□ -1.71
SYNCRIP-204ENST00000616122 RBMY1FQ15415 496 aaKnown RBP4.34□□□□□ -1.71
SYNCRIP-204ENST00000616122 TMEM95Q3KNT9 176 aa4.34□□□□□ -1.71
SYNCRIP-204ENST00000616122 Q8N8P6 123 aa4.34□□□□□ -1.71
SYNCRIP-204ENST00000616122 C10orf105Q8TEF2 133 aa4.34□□□□□ -1.71
SYNCRIP-204ENST00000616122 F8VRH5 84 aa4.34□□□□□ -1.71
SYNCRIP-204ENST00000616122 BVES-AS1Q5T3Y7 98 aa4.34□□□□□ -1.71
SYNCRIP-204ENST00000616122 SH2D6Q7Z4S9 175 aa4.34□□□□□ -1.71
SYNCRIP-204ENST00000616122 AJUBAQ96IF1 538 aa4.34□□□□□ -1.71
SYNCRIP-204ENST00000616122 COL4A2P08572 1712 aa4.34□□□□□ -1.71
SYNCRIP-204ENST00000616122 TRAV8-4A0A0B4J246 113 aa4.34□□□□□ -1.71
SYNCRIP-204ENST00000616122 VCYO14598 125 aa4.34□□□□□ -1.71
SYNCRIP-204ENST00000616122 IGHG2P01859 326 aa4.34□□□□□ -1.71
SYNCRIP-204ENST00000616122 IGLC6P0CF74 106 aa4.34□□□□□ -1.71
SYNCRIP-204ENST00000616122 GATA3P23771 443 aa4.34□□□□□ -1.71
SYNCRIP-204ENST00000616122 CCDC140Q96MF4 163 aa4.34□□□□□ -1.71
SYNCRIP-204ENST00000616122 RNF223E7ERA6 249 aa4.34□□□□□ -1.72
SYNCRIP-204ENST00000616122 IGHV4-59P01825 116 aa4.34□□□□□ -1.72
SYNCRIP-204ENST00000616122 DSCR9P59020 149 aa4.34□□□□□ -1.72
SYNCRIP-204ENST00000616122 GAGE1Q13065 139 aa4.34□□□□□ -1.72
SYNCRIP-204ENST00000616122 MEGF9Q9H1U4 602 aa4.34□□□□□ -1.72
SYNCRIP-204ENST00000616122 LINC01549A6NIU2 74 aa4.34□□□□□ -1.72
SYNCRIP-204ENST00000616122 SPINK13Q1W4C9 94 aa4.34□□□□□ -1.72
SYNCRIP-204ENST00000616122 Q8N6K4 173 aa4.34□□□□□ -1.72
SYNCRIP-204ENST00000616122 CSTL1Q9H114 145 aa4.34□□□□□ -1.72
SYNCRIP-204ENST00000616122 VCX2Q9H322 139 aa4.34□□□□□ -1.72
SYNCRIP-204ENST00000616122 C19orf84I3L1E1 186 aa4.33□□□□□ -1.72
SYNCRIP-204ENST00000616122 PSMB2P49721 201 aa4.33□□□□□ -1.72
SYNCRIP-204ENST00000616122 DEFB131AP59861 70 aa4.33□□□□□ -1.72
SYNCRIP-204ENST00000616122 ZNF493Q6ZR52 646 aa4.33□□□□□ -1.72
SYNCRIP-204ENST00000616122 C5orf56Q8N8D9 126 aa4.33□□□□□ -1.72
SYNCRIP-204ENST00000616122 TNFRSF18Q9Y5U5 241 aa4.33□□□□□ -1.72
SYNCRIP-204ENST00000616122 MRGPRG-AS1Q2M3A8 158 aa4.33□□□□□ -1.72
SYNCRIP-204ENST00000616122 NRGNQ92686 78 aa4.33□□□□□ -1.72
SYNCRIP-204ENST00000616122 ZMAT4Q9H898 229 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms