RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 K7EMI3 77 aa16.85■□□□□ 0.29
POLR2J3-220ENST00000613744 IGKV2D-40P01614 121 aaPredicted RBP16.85■□□□□ 0.29
POLR2J3-220ENST00000613744 RPL7P18124 248 aaKnown RBP16.85■□□□□ 0.29
POLR2J3-220ENST00000613744 ZNF80P51504 273 aaPredicted RBP16.84■□□□□ 0.29
POLR2J3-220ENST00000613744 PGPEP1Q9NXJ5 209 aa16.84■□□□□ 0.29
POLR2J3-220ENST00000613744 MSRB1Q9NZV6 116 aa16.84■□□□□ 0.29
POLR2J3-220ENST00000613744 MT-ATP8P03928 68 aa16.84■□□□□ 0.29
POLR2J3-220ENST00000613744 IL17RELQ6ZVW7 336 aa16.84■□□□□ 0.29
POLR2J3-220ENST00000613744 OR11H6Q8NGC7 330 aa16.84■□□□□ 0.29
POLR2J3-220ENST00000613744 M0R1W7 72 aa16.83■□□□□ 0.28
POLR2J3-220ENST00000613744 VMO1Q7Z5L0 202 aa16.83■□□□□ 0.28
POLR2J3-220ENST00000613744 TEN1Q86WV5 123 aa16.83■□□□□ 0.28
POLR2J3-220ENST00000613744 GAS8-AS1O95177 125 aa16.82■□□□□ 0.28
POLR2J3-220ENST00000613744 ORM1P02763 201 aa16.82■□□□□ 0.28
POLR2J3-220ENST00000613744 NFE4Q86UQ8 179 aa16.82■□□□□ 0.28
POLR2J3-220ENST00000613744 IGHV1-3A0A0C4DH29 117 aa16.82■□□□□ 0.28
POLR2J3-220ENST00000613744 TMEM262E9PQX1 116 aa16.82■□□□□ 0.28
POLR2J3-220ENST00000613744 UBE2D1P51668 147 aa16.82■□□□□ 0.28
POLR2J3-220ENST00000613744 XGP55808 180 aa16.82■□□□□ 0.28
POLR2J3-220ENST00000613744 UBE2D3P61077 147 aa16.82■□□□□ 0.28
POLR2J3-220ENST00000613744 UBE2D2P62837 147 aa16.82■□□□□ 0.28
POLR2J3-220ENST00000613744 SBSPONQ8IVN8 264 aa16.82■□□□□ 0.28
POLR2J3-220ENST00000613744 SIRPDQ9H106 197 aa16.82■□□□□ 0.28
POLR2J3-220ENST00000613744 AVPP01185 164 aa16.81■□□□□ 0.28
POLR2J3-220ENST00000613744 ZFHX3Q15911 3703 aa16.81■□□□□ 0.28
POLR2J3-220ENST00000613744 TLN2Q9Y4G6 2542 aa16.81■□□□□ 0.28
POLR2J3-220ENST00000613744 IGHV3OR16-10A0A075B7F0 116 aa16.81■□□□□ 0.28
POLR2J3-220ENST00000613744 FBXL15Q9H469 300 aa16.81■□□□□ 0.28
POLR2J3-220ENST00000613744 TRBV20-1A0A075B6N2 111 aa16.8■□□□□ 0.28
POLR2J3-220ENST00000613744 IGLV1-47P01700 117 aa16.8■□□□□ 0.28
POLR2J3-220ENST00000613744 PRTN3P24158 256 aa16.8■□□□□ 0.28
POLR2J3-220ENST00000613744 KRTAP1-1Q07627 177 aa16.8■□□□□ 0.28
POLR2J3-220ENST00000613744 NRACQ8N912 160 aa16.8■□□□□ 0.28
POLR2J3-220ENST00000613744 AGRNO00468 2067 aa16.79■□□□□ 0.28
POLR2J3-220ENST00000613744 PLXNB1O43157 2135 aa16.79■□□□□ 0.28
POLR2J3-220ENST00000613744 LGALS1P09382 135 aaKnown RBP16.79■□□□□ 0.28
POLR2J3-220ENST00000613744 RNF183Q96D59 192 aa16.79■□□□□ 0.28
POLR2J3-220ENST00000613744 NDUFA3O95167 84 aa16.79■□□□□ 0.28
POLR2J3-220ENST00000613744 PPIFP30405 207 aaKnown RBP16.79■□□□□ 0.28
POLR2J3-220ENST00000613744 GAGE5Q13069 117 aa16.79■□□□□ 0.28
POLR2J3-220ENST00000613744 GAGE6Q13070 117 aa16.79■□□□□ 0.28
POLR2J3-220ENST00000613744 HIVEP1P15822 2718 aa16.78■□□□□ 0.28
POLR2J3-220ENST00000613744 RBAKDNA6NC62 111 aa16.77■□□□□ 0.28
POLR2J3-220ENST00000613744 GATA1P15976 413 aaPredicted RBP16.77■□□□□ 0.28
POLR2J3-220ENST00000613744 MFAP4P55083 255 aa16.77■□□□□ 0.28
POLR2J3-220ENST00000613744 FHL3Q13643 280 aa16.77■□□□□ 0.28
POLR2J3-220ENST00000613744 M0QXV9 152 aa16.77■□□□□ 0.27
POLR2J3-220ENST00000613744 ZNF688P0C7X2 276 aa16.77■□□□□ 0.27
POLR2J3-220ENST00000613744 TMEM78Q5T7P6 136 aa16.77■□□□□ 0.27
POLR2J3-220ENST00000613744 ZFAND6Q6FIF0 208 aa16.77■□□□□ 0.27
POLR2J3-220ENST00000613744 C1orf122Q6ZSJ8 110 aa16.77■□□□□ 0.27
POLR2J3-220ENST00000613744 Q8TAT8 98 aa16.77■□□□□ 0.27
POLR2J3-220ENST00000613744 ANAPC13Q9BS18 74 aa16.77■□□□□ 0.27
POLR2J3-220ENST00000613744 BUB1B-PAK6H3BSN5 160 aa16.76■□□□□ 0.27
POLR2J3-220ENST00000613744 CARD19Q96LW7 228 aa16.76■□□□□ 0.27
POLR2J3-220ENST00000613744 IGHV4-4A0A075B6R2 117 aa16.76■□□□□ 0.27
POLR2J3-220ENST00000613744 LINC01549A6NIU2 74 aa16.76■□□□□ 0.27
POLR2J3-220ENST00000613744 PSMB2P49721 201 aa16.76■□□□□ 0.27
POLR2J3-220ENST00000613744 YAE1D1Q9NRH1 226 aa16.76■□□□□ 0.27
POLR2J3-220ENST00000613744 SCGB2A1O75556 95 aa16.75■□□□□ 0.27
POLR2J3-220ENST00000613744 CNIH1O95406 144 aa16.75■□□□□ 0.27
POLR2J3-220ENST00000613744 GATA3P23771 443 aa16.75■□□□□ 0.27
POLR2J3-220ENST00000613744 ORMDL2Q53FV1 153 aa16.75■□□□□ 0.27
POLR2J3-220ENST00000613744 LY6G6DO95868 133 aa16.74■□□□□ 0.27
POLR2J3-220ENST00000613744 PRB4P10163 310 aaPredicted RBP16.74■□□□□ 0.27
POLR2J3-220ENST00000613744 A8MWV9 139 aa16.74■□□□□ 0.27
POLR2J3-220ENST00000613744 IGHG4P01861 327 aa16.74■□□□□ 0.27
POLR2J3-220ENST00000613744 IGHV4-38-2P0DP08 117 aa16.74■□□□□ 0.27
POLR2J3-220ENST00000613744 NEXN-AS1Q8NBZ9 246 aa16.74■□□□□ 0.27
POLR2J3-220ENST00000613744 CENPVL3A0A0U1RRI6 287 aa16.73■□□□□ 0.27
POLR2J3-220ENST00000613744 BRD3OSQ6XYD6 125 aa16.73■□□□□ 0.27
POLR2J3-220ENST00000613744 TOMM6Q96B49 74 aa16.73■□□□□ 0.27
POLR2J3-220ENST00000613744 TEX29Q8N6K0 151 aa16.73■□□□□ 0.27
POLR2J3-220ENST00000613744 GLMPQ8WWB7 406 aa16.73■□□□□ 0.27
POLR2J3-220ENST00000613744 SMIM2Q9BVW6 85 aa16.72■□□□□ 0.27
POLR2J3-220ENST00000613744 SONP18583 2426 aaKnown RBP16.72■□□□□ 0.27
POLR2J3-220ENST00000613744 LOC107984156A0A0G2JMH3 177 aa16.71■□□□□ 0.27
POLR2J3-220ENST00000613744 J3QLI3 93 aa16.71■□□□□ 0.27
POLR2J3-220ENST00000613744 ARL17AQ8IVW1 177 aa16.71■□□□□ 0.27
POLR2J3-220ENST00000613744 CITED1Q99966 193 aa16.71■□□□□ 0.27
POLR2J3-220ENST00000613744 SLC50A1Q9BRV3 221 aa16.71■□□□□ 0.27
POLR2J3-220ENST00000613744 ODF3BA8MYP8 253 aa16.71■□□□□ 0.27
POLR2J3-220ENST00000613744 CD7P09564 240 aa16.71■□□□□ 0.27
POLR2J3-220ENST00000613744 SRD5A1P18405 259 aa16.71■□□□□ 0.27
POLR2J3-220ENST00000613744 ASIPP42127 132 aa16.71■□□□□ 0.27
POLR2J3-220ENST00000613744 IGLV11-55A0A075B6I3 123 aa16.7■□□□□ 0.26
POLR2J3-220ENST00000613744 PRSS29PA6NIE9 313 aa16.7■□□□□ 0.26
POLR2J3-220ENST00000613744 SCGB3A1Q96QR1 104 aa16.7■□□□□ 0.26
POLR2J3-220ENST00000613744 PRADC1Q9BSG0 188 aa16.7■□□□□ 0.26
POLR2J3-220ENST00000613744 SPANXA1Q9NS26 97 aa16.7■□□□□ 0.26
POLR2J3-220ENST00000613744 ZNF815PA8K554 130 aa16.69■□□□□ 0.26
POLR2J3-220ENST00000613744 ERCC8Q13216 396 aa16.69■□□□□ 0.26
POLR2J3-220ENST00000613744 SMAD5-AS1Q9Y6J3 95 aa16.69■□□□□ 0.26
POLR2J3-220ENST00000613744 TRGV3P03979 118 aa16.69■□□□□ 0.26
POLR2J3-220ENST00000613744 UBE2E1P51965 193 aa16.69■□□□□ 0.26
POLR2J3-220ENST00000613744 SRSF9Q13242 221 aaKnown RBP eCLIP16.69■□□□□ 0.26
POLR2J3-220ENST00000613744 CFHR4Q92496 578 aa16.69■□□□□ 0.26
POLR2J3-220ENST00000613744 DPM3Q9P2X0 92 aa16.69■□□□□ 0.26
POLR2J3-220ENST00000613744 MAST4O15021 2626 aa16.68■□□□□ 0.26
POLR2J3-220ENST00000613744 IGKV3D-20A0A0C4DH25 116 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms