RNA–Protein interactions for RNA: ENST00000613459.4

HMGXB3-206, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-206ENST00000613459 NDUFS5O43920 106 aa13.56□□□□□ -0.24
HMGXB3-206ENST00000613459 XCL1P47992 114 aa13.56□□□□□ -0.24
HMGXB3-206ENST00000613459 MUSTN1Q8IVN3 82 aa13.56□□□□□ -0.24
HMGXB3-206ENST00000613459 ZFP2Q6ZN57 461 aa13.56□□□□□ -0.24
HMGXB3-206ENST00000613459 UBE2BP63146 152 aa13.56□□□□□ -0.24
HMGXB3-206ENST00000613459 COL6A6A6NMZ7 2263 aa13.56□□□□□ -0.24
HMGXB3-206ENST00000613459 HEATR5AQ86XA9 2040 aa13.55□□□□□ -0.24
HMGXB3-206ENST00000613459 IGKV2D-24A0A075B6R9 120 aa13.55□□□□□ -0.24
HMGXB3-206ENST00000613459 WI2-2373I1.2A0A1W2PRP0 233 aa13.55□□□□□ -0.24
HMGXB3-206ENST00000613459 CXCL5P42830 114 aa13.55□□□□□ -0.24
HMGXB3-206ENST00000613459 SMIM20Q8N5G0 67 aa13.55□□□□□ -0.24
HMGXB3-206ENST00000613459 ATP6V0E2Q8NHE4 81 aa13.55□□□□□ -0.24
HMGXB3-206ENST00000613459 RS1O15537 224 aa13.54□□□□□ -0.24
HMGXB3-206ENST00000613459 IGHV4-59P01825 116 aa13.54□□□□□ -0.24
HMGXB3-206ENST00000613459 C9orf47Q6ZRZ4 202 aa13.54□□□□□ -0.24
HMGXB3-206ENST00000613459 PKDREJQ9NTG1 2253 aa13.54□□□□□ -0.24
HMGXB3-206ENST00000613459 LINC01620Q4KN68 170 aa13.54□□□□□ -0.24
HMGXB3-206ENST00000613459 ETDCA0A1B0GVM5 59 aa13.54□□□□□ -0.24
HMGXB3-206ENST00000613459 CLPSL2Q6UWE3 100 aa13.54□□□□□ -0.24
HMGXB3-206ENST00000613459 TRAV4A0A0B4J268 109 aa13.54□□□□□ -0.24
HMGXB3-206ENST00000613459 ANKRD39Q53RE8 183 aa13.54□□□□□ -0.24
HMGXB3-206ENST00000613459 ATP5G1P05496 136 aa13.53□□□□□ -0.24
HMGXB3-206ENST00000613459 TIMM17AQ99595 171 aa13.53□□□□□ -0.24
HMGXB3-206ENST00000613459 DOCK8Q8NF50 2099 aa13.53□□□□□ -0.24
HMGXB3-206ENST00000613459 ZNF407Q9C0G0 2248 aa13.53□□□□□ -0.24
HMGXB3-206ENST00000613459 IGKV1-17P01599 117 aa13.53□□□□□ -0.24
HMGXB3-206ENST00000613459 PSMB8P28062 276 aa13.53□□□□□ -0.24
HMGXB3-206ENST00000613459 COX7A2LO14548 114 aa13.53□□□□□ -0.24
HMGXB3-206ENST00000613459 BUB3O43684 328 aa13.53□□□□□ -0.24
HMGXB3-206ENST00000613459 SPART-AS1P0CW21 52 aa13.53□□□□□ -0.24
HMGXB3-206ENST00000613459 CGB7P0DN87 165 aa13.53□□□□□ -0.24
HMGXB3-206ENST00000613459 PRSS33Q8NF86 280 aa13.53□□□□□ -0.24
HMGXB3-206ENST00000613459 CTSGP08311 255 aa13.53□□□□□ -0.24
HMGXB3-206ENST00000613459 GATA1P15976 413 aaPredicted RBP13.53□□□□□ -0.24
HMGXB3-206ENST00000613459 A0A1B0GX51 115 aa13.52□□□□□ -0.24
HMGXB3-206ENST00000613459 RPL39LQ96EH5 51 aaKnown RBP13.52□□□□□ -0.24
HMGXB3-206ENST00000613459 MRPL36Q9P0J6 103 aaKnown RBP13.52□□□□□ -0.24
HMGXB3-206ENST00000613459 IGKV1OR2-108A0A075B7D4 117 aa13.52□□□□□ -0.25
HMGXB3-206ENST00000613459 A4D1N5 150 aa13.52□□□□□ -0.25
HMGXB3-206ENST00000613459 SND1-IT1Q9HBX3 110 aa13.52□□□□□ -0.25
HMGXB3-206ENST00000613459 A0A096LPF7 62 aa13.52□□□□□ -0.25
HMGXB3-206ENST00000613459 TOMM6Q96B49 74 aa13.52□□□□□ -0.25
HMGXB3-206ENST00000613459 TAX1BP3O14907 124 aa13.52□□□□□ -0.25
HMGXB3-206ENST00000613459 COX7B2Q8TF08 81 aa13.52□□□□□ -0.25
HMGXB3-206ENST00000613459 OPRPNQ99935 248 aaPredicted RBP13.52□□□□□ -0.25
HMGXB3-206ENST00000613459 YLPM1P49750 1951 aaKnown RBP13.52□□□□□ -0.25
HMGXB3-206ENST00000613459 DOPEY2Q9Y3R5 2298 aa13.51□□□□□ -0.25
HMGXB3-206ENST00000613459 FOXI1Q12951 378 aa13.51□□□□□ -0.25
HMGXB3-206ENST00000613459 DEFB105AQ8NG35 78 aa13.51□□□□□ -0.25
HMGXB3-206ENST00000613459 C5orf47Q569G3 176 aa13.51□□□□□ -0.25
HMGXB3-206ENST00000613459 Q71RC1 249 aaPredicted RBP13.51□□□□□ -0.25
HMGXB3-206ENST00000613459 HELZP42694 1942 aaKnown RBP13.51□□□□□ -0.25
HMGXB3-206ENST00000613459 DIDO1Q9BTC0 2240 aaKnown RBP13.51□□□□□ -0.25
HMGXB3-206ENST00000613459 KIAA1671Q9BY89 1806 aa13.51□□□□□ -0.25
HMGXB3-206ENST00000613459 FAM236AA0A1B0GUQ0 79 aa13.51□□□□□ -0.25
HMGXB3-206ENST00000613459 FAM236BA0A1B0GV22 79 aa13.51□□□□□ -0.25
HMGXB3-206ENST00000613459 CTRLP40313 264 aa13.51□□□□□ -0.25
HMGXB3-206ENST00000613459 MP68P56378 58 aa13.51□□□□□ -0.25
HMGXB3-206ENST00000613459 AJUBAQ96IF1 538 aa13.51□□□□□ -0.25
HMGXB3-206ENST00000613459 DEFB113Q30KQ7 82 aa13.5□□□□□ -0.25
HMGXB3-206ENST00000613459 PATE2Q6UY27 113 aa13.5□□□□□ -0.25
HMGXB3-206ENST00000613459 CAMK2N2Q96S95 79 aa13.5□□□□□ -0.25
HMGXB3-206ENST00000613459 FGF23Q9GZV9 251 aaPredicted RBP13.5□□□□□ -0.25
HMGXB3-206ENST00000613459 LINC00173Q6ZV60 143 aa13.5□□□□□ -0.25
HMGXB3-206ENST00000613459 LYPD6Q86Y78 171 aa13.5□□□□□ -0.25
HMGXB3-206ENST00000613459 TRBV10-2A0A0K0K1G8 114 aa13.5□□□□□ -0.25
HMGXB3-206ENST00000613459 JMJD7-PLA2G4BH0Y9G9 81 aa13.5□□□□□ -0.25
HMGXB3-206ENST00000613459 C11orf86A6NJI1 115 aa13.49□□□□□ -0.25
HMGXB3-206ENST00000613459 FAM167A-AS1Q96KT0 104 aa13.49□□□□□ -0.25
HMGXB3-206ENST00000613459 ANAPC1Q9H1A4 1944 aa13.48□□□□□ -0.25
HMGXB3-206ENST00000613459 GYPEP15421 78 aa13.48□□□□□ -0.25
HMGXB3-206ENST00000613459 FXYD2P54710 66 aa13.48□□□□□ -0.25
HMGXB3-206ENST00000613459 C5orf56Q8N8D9 126 aa13.48□□□□□ -0.25
HMGXB3-206ENST00000613459 E9PLD3 99 aa13.48□□□□□ -0.25
HMGXB3-206ENST00000613459 GPHB5Q86YW7 130 aa13.48□□□□□ -0.25
HMGXB3-206ENST00000613459 VSIG2Q96IQ7 327 aa13.48□□□□□ -0.25
HMGXB3-206ENST00000613459 G3V4G9 280 aa13.48□□□□□ -0.25
HMGXB3-206ENST00000613459 CHKB-CPT1BH3BT56 60 aa13.48□□□□□ -0.25
HMGXB3-206ENST00000613459 TANC1Q9C0D5 1861 aa13.48□□□□□ -0.25
HMGXB3-206ENST00000613459 A0A0J9YY99 117 aa13.48□□□□□ -0.25
HMGXB3-206ENST00000613459 WFDC9Q8NEX5 89 aa13.48□□□□□ -0.25
HMGXB3-206ENST00000613459 H3BT86 120 aa13.48□□□□□ -0.25
HMGXB3-206ENST00000613459 NDUFB1O75438 58 aa13.48□□□□□ -0.25
HMGXB3-206ENST00000613459 Q8N9W7 124 aa13.48□□□□□ -0.25
HMGXB3-206ENST00000613459 BAALCQ8WXS3 180 aa13.48□□□□□ -0.25
HMGXB3-206ENST00000613459 WNK2Q9Y3S1 2297 aa13.47□□□□□ -0.25
HMGXB3-206ENST00000613459 DAZAP2Q15038 168 aaPredicted RBP13.47□□□□□ -0.25
HMGXB3-206ENST00000613459 ABCA1O95477 2261 aa13.47□□□□□ -0.25
HMGXB3-206ENST00000613459 CCL18P55774 89 aa13.47□□□□□ -0.25
HMGXB3-206ENST00000613459 Q6ZQT7 251 aa13.47□□□□□ -0.25
HMGXB3-206ENST00000613459 C5orf38Q86SI9 138 aa13.47□□□□□ -0.25
HMGXB3-206ENST00000613459 IGKV3D-7A0A0C4DH55 119 aa13.47□□□□□ -0.25
HMGXB3-206ENST00000613459 ZNF503Q96F45 646 aa13.47□□□□□ -0.25
HMGXB3-206ENST00000613459 CACNA1BQ00975 2339 aa13.46□□□□□ -0.25
HMGXB3-206ENST00000613459 A0A0J9YXV3 536 aa13.46□□□□□ -0.25
HMGXB3-206ENST00000613459 USF3Q68DE3 2245 aa13.46□□□□□ -0.25
HMGXB3-206ENST00000613459 C10orf105Q8TEF2 133 aa13.46□□□□□ -0.25
HMGXB3-206ENST00000613459 PIFOQ8TCI5 191 aa13.46□□□□□ -0.25
HMGXB3-206ENST00000613459 IGLV2-23P01705 113 aa13.46□□□□□ -0.26
HMGXB3-206ENST00000613459 RBX1P62877 108 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 919 ms