RNA–Protein interactions for RNA: ENST00000604929.1

TUBB4B-202, Transcript of tubulin beta 4B class IVb, humanhuman

TSL 1 (best)

Gene TUBB4B, Length 2,035 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4B-202ENST00000604929 CITED1Q99966 193 aa14.14□□□□□ -0.15
TUBB4B-202ENST00000604929 TRRAPQ9Y4A5 3859 aa14.13□□□□□ -0.15
TUBB4B-202ENST00000604929 RAB4AP20338 218 aa14.13□□□□□ -0.15
TUBB4B-202ENST00000604929 STHQ8IWL8 128 aa14.13□□□□□ -0.15
TUBB4B-202ENST00000604929 Q8N1Y9 231 aa14.13□□□□□ -0.15
TUBB4B-202ENST00000604929 FAM19A2Q8N3H0 131 aa14.13□□□□□ -0.15
TUBB4B-202ENST00000604929 SAMD10Q9BYL1 202 aa14.13□□□□□ -0.15
TUBB4B-202ENST00000604929 PRM2P04554 102 aa14.12□□□□□ -0.15
TUBB4B-202ENST00000604929 ESDP10768 282 aa14.12□□□□□ -0.15
TUBB4B-202ENST00000604929 CACNG7P62955 275 aa14.12□□□□□ -0.15
TUBB4B-202ENST00000604929 DMRTA1Q5VZB9 504 aa14.12□□□□□ -0.15
TUBB4B-202ENST00000604929 RNASEKQ6P5S7 137 aaKnown RBP14.12□□□□□ -0.15
TUBB4B-202ENST00000604929 RNF185Q96GF1 192 aa14.12□□□□□ -0.15
TUBB4B-202ENST00000604929 MDFICQ9P1T7 246 aa14.12□□□□□ -0.15
TUBB4B-202ENST00000604929 IGHV4-4A0A075B6R2 117 aa14.12□□□□□ -0.15
TUBB4B-202ENST00000604929 IGHV1OR15-1A0A075B7D0 117 aa14.12□□□□□ -0.15
TUBB4B-202ENST00000604929 A8MTW9 85 aa14.12□□□□□ -0.15
TUBB4B-202ENST00000604929 GAS8-AS1O95177 125 aa14.12□□□□□ -0.15
TUBB4B-202ENST00000604929 NCR2O95944 276 aa14.12□□□□□ -0.15
TUBB4B-202ENST00000604929 CKS2P33552 79 aa14.12□□□□□ -0.15
TUBB4B-202ENST00000604929 TDRG1Q3Y452 100 aa14.12□□□□□ -0.15
TUBB4B-202ENST00000604929 WFDC10AQ9H1F0 79 aa14.12□□□□□ -0.15
TUBB4B-202ENST00000604929 PMCHP20382 165 aa14.11□□□□□ -0.15
TUBB4B-202ENST00000604929 PYY3Q5JQD4 70 aa14.11□□□□□ -0.15
TUBB4B-202ENST00000604929 URB1-AS1Q96HZ7 61 aa14.11□□□□□ -0.15
TUBB4B-202ENST00000604929 SCRT2Q9NQ03 307 aa14.11□□□□□ -0.15
TUBB4B-202ENST00000604929 MUC4Q99102 2169 aa14.11□□□□□ -0.15
TUBB4B-202ENST00000604929 SMIM15Q7Z3B0 74 aa14.1□□□□□ -0.15
TUBB4B-202ENST00000604929 ORMDL3Q8N138 153 aa14.1□□□□□ -0.15
TUBB4B-202ENST00000604929 PRELID3AQ96N28 172 aa14.1□□□□□ -0.15
TUBB4B-202ENST00000604929 LOC389332A0A1B0GUA5 103 aa14.1□□□□□ -0.15
TUBB4B-202ENST00000604929 AMTP48728 403 aa14.09□□□□□ -0.15
TUBB4B-202ENST00000604929 DNLZQ5SXM8 178 aa14.09□□□□□ -0.15
TUBB4B-202ENST00000604929 XCL2Q9UBD3 114 aa14.09□□□□□ -0.15
TUBB4B-202ENST00000604929 IGHV3-16A0A0C4DH30 117 aa14.08□□□□□ -0.15
TUBB4B-202ENST00000604929 CBY3A6NI87 242 aa14.08□□□□□ -0.15
TUBB4B-202ENST00000604929 BEAN1Q3B7T3 259 aa14.08□□□□□ -0.15
TUBB4B-202ENST00000604929 C14orf178Q8N769 122 aaPredicted RBP14.08□□□□□ -0.15
TUBB4B-202ENST00000604929 U3KQK5 164 aa14.08□□□□□ -0.15
TUBB4B-202ENST00000604929 FBN1P35555 2871 aaKnown RBP14.08□□□□□ -0.16
TUBB4B-202ENST00000604929 TRAV26-2A0A0B4J265 109 aa14.08□□□□□ -0.16
TUBB4B-202ENST00000604929 HSBP1O75506 76 aa14.08□□□□□ -0.16
TUBB4B-202ENST00000604929 LINC00614P0C842 121 aa14.08□□□□□ -0.16
TUBB4B-202ENST00000604929 MED14OSP0DP75 135 aa14.08□□□□□ -0.16
TUBB4B-202ENST00000604929 GATA1P15976 413 aaPredicted RBP14.08□□□□□ -0.16
TUBB4B-202ENST00000604929 PMCHL1Q16048 86 aa14.08□□□□□ -0.16
TUBB4B-202ENST00000604929 KRTAP24-1Q3LI83 254 aa14.07□□□□□ -0.16
TUBB4B-202ENST00000604929 OR2K2Q8NGT1 345 aa14.07□□□□□ -0.16
TUBB4B-202ENST00000604929 SMIM6P0DI80 62 aa14.07□□□□□ -0.16
TUBB4B-202ENST00000604929 NPYP01303 97 aa14.06□□□□□ -0.16
TUBB4B-202ENST00000604929 CDPF1Q6NVV7 123 aa14.06□□□□□ -0.16
TUBB4B-202ENST00000604929 TRPT1Q86TN4 253 aaKnown RBP14.06□□□□□ -0.16
TUBB4B-202ENST00000604929 PRSS3P2Q8NHM4 247 aa14.06□□□□□ -0.16
TUBB4B-202ENST00000604929 LINC01587Q99440 93 aa14.06□□□□□ -0.16
TUBB4B-202ENST00000604929 JPT2Q9H910 190 aa14.06□□□□□ -0.16
TUBB4B-202ENST00000604929 C19orf73Q9NVV2 129 aa14.06□□□□□ -0.16
TUBB4B-202ENST00000604929 IFI27P40305 119 aaPredicted RBP14.05□□□□□ -0.16
TUBB4B-202ENST00000604929 CMC4P56277 68 aaPredicted RBP14.05□□□□□ -0.16
TUBB4B-202ENST00000604929 Q6ZWC4 215 aa14.05□□□□□ -0.16
TUBB4B-202ENST00000604929 IGHV3OR16-12A0A075B7B8 117 aa14.04□□□□□ -0.16
TUBB4B-202ENST00000604929 RPL35AP18077 110 aaKnown RBP14.04□□□□□ -0.16
TUBB4B-202ENST00000604929 C9orf85Q96MD7 179 aa14.04□□□□□ -0.16
TUBB4B-202ENST00000604929 NIT2Q9NQR4 276 aa14.04□□□□□ -0.16
TUBB4B-202ENST00000604929 INSP01308 110 aa14.03□□□□□ -0.16
TUBB4B-202ENST00000604929 CLUHP3Q96NS8 147 aa14.03□□□□□ -0.16
TUBB4B-202ENST00000604929 MAST4O15021 2626 aa14.02□□□□□ -0.16
TUBB4B-202ENST00000604929 TNFRSF6BO95407 300 aa14.02□□□□□ -0.16
TUBB4B-202ENST00000604929 PPBPP02775 128 aa14.02□□□□□ -0.16
TUBB4B-202ENST00000604929 MGPP08493 103 aa14.02□□□□□ -0.16
TUBB4B-202ENST00000604929 NUTF2P61970 127 aaKnown RBP14.02□□□□□ -0.16
TUBB4B-202ENST00000604929 CHCHD1Q96BP2 118 aaKnown RBP14.02□□□□□ -0.16
TUBB4B-202ENST00000604929 TMEM208Q9BTX3 173 aa14.02□□□□□ -0.16
TUBB4B-202ENST00000604929 DPH3P1Q9H4G8 78 aa14.02□□□□□ -0.16
TUBB4B-202ENST00000604929 TRGV11A0A075B6L2 103 aa14.02□□□□□ -0.17
TUBB4B-202ENST00000604929 A0A087WWL8 130 aa14.02□□□□□ -0.17
TUBB4B-202ENST00000604929 JOSD1Q15040 202 aaPredicted RBP14.02□□□□□ -0.17
TUBB4B-202ENST00000604929 C9orf66Q5T8R8 295 aa14.02□□□□□ -0.17
TUBB4B-202ENST00000604929 DEFB125Q8N687 156 aa14.02□□□□□ -0.17
TUBB4B-202ENST00000604929 FA2HQ7L5A8 372 aa14.01□□□□□ -0.17
TUBB4B-202ENST00000604929 PRIMA1Q86XR5 153 aa14.01□□□□□ -0.17
TUBB4B-202ENST00000604929 AP1S3Q96PC3 154 aa14.01□□□□□ -0.17
TUBB4B-202ENST00000604929 NXPH4O95158 308 aa14□□□□□ -0.17
TUBB4B-202ENST00000604929 ZNF876PQ49A33 203 aa14□□□□□ -0.17
TUBB4B-202ENST00000604929 FAM110AQ9BQ89 295 aa14□□□□□ -0.17
TUBB4B-202ENST00000604929 IGHV1-24A0A0C4DH33 117 aa14□□□□□ -0.17
TUBB4B-202ENST00000604929 SCGB1D1O95968 90 aa14□□□□□ -0.17
TUBB4B-202ENST00000604929 INSL3P51460 131 aa14□□□□□ -0.17
TUBB4B-202ENST00000604929 C1orf158Q8N1D5 194 aa14□□□□□ -0.17
TUBB4B-202ENST00000604929 AP5S1Q9NUS5 200 aa14□□□□□ -0.17
TUBB4B-202ENST00000604929 SMIM17P0DL12 118 aa13.99□□□□□ -0.17
TUBB4B-202ENST00000604929 KRTDAPP60985 99 aa13.99□□□□□ -0.17
TUBB4B-202ENST00000604929 GSN-AS1Q9NRJ2 163 aa13.99□□□□□ -0.17
TUBB4B-202ENST00000604929 PCP4L1A6NKN8 68 aa13.98□□□□□ -0.17
TUBB4B-202ENST00000604929 IGLL1P15814 213 aa13.98□□□□□ -0.17
TUBB4B-202ENST00000604929 AZU1P20160 251 aa13.98□□□□□ -0.17
TUBB4B-202ENST00000604929 FAM74A4Q5TZK3 123 aa13.98□□□□□ -0.17
TUBB4B-202ENST00000604929 KIF25-AS1Q9Y6Z4 181 aa13.98□□□□□ -0.17
TUBB4B-202ENST00000604929 GIG44P09565 113 aaPredicted RBP13.98□□□□□ -0.17
TUBB4B-202ENST00000604929 NRACQ8N912 160 aa13.98□□□□□ -0.17
TUBB4B-202ENST00000604929 SYT8Q8NBV8 401 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms