RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 CABIN1Q9Y6J0 2220 aa6.65□□□□□ -1.35
COMMD3-215ENST00000602574 IGHV1OR15-9A0A0B4J2B8 117 aa6.65□□□□□ -1.35
COMMD3-215ENST00000602574 SMKR1H3BMG3 65 aa6.65□□□□□ -1.35
COMMD3-215ENST00000602574 S100A7L2Q5SY68 101 aa6.65□□□□□ -1.35
COMMD3-215ENST00000602574 TMEM14BQ9NUH8 114 aa6.65□□□□□ -1.35
COMMD3-215ENST00000602574 SPRY2O43597 315 aa6.64□□□□□ -1.35
COMMD3-215ENST00000602574 SUB1P53999 127 aaKnown RBP eCLIP6.64□□□□□ -1.351e-6■■■■■ 30.7
COMMD3-215ENST00000602574 DEFB127Q9H1M4 99 aa6.64□□□□□ -1.35
COMMD3-215ENST00000602574 IGHV1OR21-1A0A087WYE8 117 aa6.64□□□□□ -1.35
COMMD3-215ENST00000602574 IGHV5-51A0A0C4DH38 117 aa6.63□□□□□ -1.35
COMMD3-215ENST00000602574 PATE2Q6UY27 113 aa6.63□□□□□ -1.35
COMMD3-215ENST00000602574 THAP8Q8NA92 274 aa6.63□□□□□ -1.35
COMMD3-215ENST00000602574 KLF14Q8TD94 323 aaPredicted RBP6.63□□□□□ -1.35
COMMD3-215ENST00000602574 RPP25Q9BUL9 199 aaKnown RBP6.63□□□□□ -1.35
COMMD3-215ENST00000602574 E7EUB6 86 aa6.62□□□□□ -1.35
COMMD3-215ENST00000602574 H7C2G1 150 aa6.62□□□□□ -1.35
COMMD3-215ENST00000602574 RUSC1-AS1Q66K80 236 aa6.62□□□□□ -1.35
COMMD3-215ENST00000602574 ZNF826PQ6ZT77 177 aa6.62□□□□□ -1.35
COMMD3-215ENST00000602574 PRNTQ86SH4 94 aa6.62□□□□□ -1.35
COMMD3-215ENST00000602574 MUSTN1Q8IVN3 82 aa6.62□□□□□ -1.35
COMMD3-215ENST00000602574 SCGB3A1Q96QR1 104 aa6.62□□□□□ -1.35
COMMD3-215ENST00000602574 TMEM14CQ9P0S9 112 aa6.62□□□□□ -1.35
COMMD3-215ENST00000602574 A0A1W2PNR3 127 aa6.62□□□□□ -1.35
COMMD3-215ENST00000602574 KLHL30-AS1Q8NEE0 82 aa6.62□□□□□ -1.35
COMMD3-215ENST00000602574 C8orf87E5RJ46 101 aa6.61□□□□□ -1.35
COMMD3-215ENST00000602574 CIRBPQ14011 172 aaKnown RBP6.61□□□□□ -1.35
COMMD3-215ENST00000602574 UNQ9165/PRO28630Q6UXU0 137 aa6.61□□□□□ -1.35
COMMD3-215ENST00000602574 VMO1Q7Z5L0 202 aa6.61□□□□□ -1.35
COMMD3-215ENST00000602574 ZNF575Q86XF7 245 aa6.61□□□□□ -1.35
COMMD3-215ENST00000602574 TRAV8-3A0A0A6YYJ7 113 aa6.61□□□□□ -1.35
COMMD3-215ENST00000602574 IGHV1-69DA0A0B4J2H0 117 aa6.61□□□□□ -1.35
COMMD3-215ENST00000602574 I3L3M4 83 aa6.61□□□□□ -1.35
COMMD3-215ENST00000602574 K7EMT4 169 aa6.61□□□□□ -1.35
COMMD3-215ENST00000602574 IGHV4-34P06331 123 aa6.61□□□□□ -1.35
COMMD3-215ENST00000602574 ZNF32P17041 273 aa6.61□□□□□ -1.35
COMMD3-215ENST00000602574 PRCDQ00LT1 54 aa6.61□□□□□ -1.35
COMMD3-215ENST00000602574 ESRGQ1W209 222 aa6.61□□□□□ -1.35
COMMD3-215ENST00000602574 LYPD1Q8N2G4 141 aa6.61□□□□□ -1.35
COMMD3-215ENST00000602574 CLEC2BQ92478 149 aa6.61□□□□□ -1.35
COMMD3-215ENST00000602574 A0A087WWL8 130 aa6.6□□□□□ -1.35
COMMD3-215ENST00000602574 IGIPA6NJ69 53 aa6.6□□□□□ -1.35
COMMD3-215ENST00000602574 LEPROTO15243 131 aa6.6□□□□□ -1.35
COMMD3-215ENST00000602574 CRIP1P50238 77 aa6.6□□□□□ -1.35
COMMD3-215ENST00000602574 Q1T7F1 81 aa6.6□□□□□ -1.35
COMMD3-215ENST00000602574 C14orf178Q8N769 122 aaPredicted RBP6.6□□□□□ -1.35
COMMD3-215ENST00000602574 IMMP1LQ96LU5 166 aa6.6□□□□□ -1.35
COMMD3-215ENST00000602574 C11orf68Q9H3H3 251 aaKnown RBP6.6□□□□□ -1.35
COMMD3-215ENST00000602574 SPAG17Q6Q759 2223 aa6.6□□□□□ -1.35
COMMD3-215ENST00000602574 GOLGB1Q14789 3259 aaKnown RBP6.6□□□□□ -1.35
COMMD3-215ENST00000602574 J3QT63 122 aa6.6□□□□□ -1.35
COMMD3-215ENST00000602574 M0R378 163 aa6.6□□□□□ -1.35
COMMD3-215ENST00000602574 M0R3E3 92 aa6.6□□□□□ -1.35
COMMD3-215ENST00000602574 COX7A2LO14548 114 aa6.6□□□□□ -1.35
COMMD3-215ENST00000602574 DNAL4O96015 105 aa6.6□□□□□ -1.35
COMMD3-215ENST00000602574 PRRC2BQ5JSZ5 2229 aaKnown RBP6.59□□□□□ -1.35
COMMD3-215ENST00000602574 IGLV4-69A0A075B6H9 119 aa6.59□□□□□ -1.35
COMMD3-215ENST00000602574 A0A087WVE0 104 aa6.59□□□□□ -1.35
COMMD3-215ENST00000602574 BLCAPP62952 87 aa6.59□□□□□ -1.35
COMMD3-215ENST00000602574 Q6ZVQ6 151 aa6.59□□□□□ -1.35
COMMD3-215ENST00000602574 IGKV3D-7A0A0C4DH55 119 aa6.59□□□□□ -1.36
COMMD3-215ENST00000602574 F8WEM9 126 aa6.59□□□□□ -1.36
COMMD3-215ENST00000602574 TSPEAR-AS2P59090 65 aa6.59□□□□□ -1.36
COMMD3-215ENST00000602574 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.59□□□□□ -1.36
COMMD3-215ENST00000602574 PRR26Q8N8Z3 221 aa6.59□□□□□ -1.36
COMMD3-215ENST00000602574 SMIM2Q9BVW6 85 aa6.59□□□□□ -1.36
COMMD3-215ENST00000602574 LINC00588Q9Y4M8 146 aa6.59□□□□□ -1.36
COMMD3-215ENST00000602574 PHF5AQ7RTV0 110 aaKnown RBP6.58□□□□□ -1.36
COMMD3-215ENST00000602574 OBSCN-AS1Q96MR7 158 aa6.58□□□□□ -1.36
COMMD3-215ENST00000602574 FGF23Q9GZV9 251 aaPredicted RBP6.58□□□□□ -1.36
COMMD3-215ENST00000602574 IGHV1-45A0A0A0MS14 117 aa6.57□□□□□ -1.36
COMMD3-215ENST00000602574 VEGFBP49765 207 aa6.57□□□□□ -1.36
COMMD3-215ENST00000602574 DEFB126Q9BYW3 111 aa6.57□□□□□ -1.36
COMMD3-215ENST00000602574 SPRR3Q9UBC9 169 aa6.57□□□□□ -1.36
COMMD3-215ENST00000602574 ABCA7Q8IZY2 2146 aa6.57□□□□□ -1.36
COMMD3-215ENST00000602574 SPATA3Q8NHX4 192 aa6.57□□□□□ -1.36
COMMD3-215ENST00000602574 C22orf24Q9Y442 160 aa6.57□□□□□ -1.36
COMMD3-215ENST00000602574 RP1P56715 2156 aa6.56□□□□□ -1.36
COMMD3-215ENST00000602574 E7EQL1 145 aa6.56□□□□□ -1.36
COMMD3-215ENST00000602574 SH2D1AO60880 128 aa6.56□□□□□ -1.36
COMMD3-215ENST00000602574 UBE2BP63146 152 aa6.56□□□□□ -1.36
COMMD3-215ENST00000602574 SERTAD4-AS1Q5TG53 156 aa6.56□□□□□ -1.36
COMMD3-215ENST00000602574 TMEM61Q8N0U2 210 aa6.56□□□□□ -1.36
COMMD3-215ENST00000602574 CTSZQ9UBR2 303 aa6.56□□□□□ -1.36
COMMD3-215ENST00000602574 C12orf77C9JDV5 145 aa6.56□□□□□ -1.36
COMMD3-215ENST00000602574 UBE2L6O14933 153 aa6.56□□□□□ -1.36
COMMD3-215ENST00000602574 ERC2-IT1O76042 136 aa6.56□□□□□ -1.36
COMMD3-215ENST00000602574 BAALC-AS2P0C853 105 aa6.56□□□□□ -1.36
COMMD3-215ENST00000602574 ZNF80P51504 273 aaPredicted RBP6.56□□□□□ -1.36
COMMD3-215ENST00000602574 DYNLRB2Q8TF09 96 aa6.56□□□□□ -1.36
COMMD3-215ENST00000602574 PSMG3-AS1Q96PY0 264 aa6.56□□□□□ -1.36
COMMD3-215ENST00000602574 FER1L5A0AVI2 2057 aa6.56□□□□□ -1.36
COMMD3-215ENST00000602574 IGKV1D-37A0A075B6S9 117 aa6.55□□□□□ -1.36
COMMD3-215ENST00000602574 IGKV3D-15A0A087WSY6 115 aa6.55□□□□□ -1.36
COMMD3-215ENST00000602574 CCL5P13501 91 aa6.55□□□□□ -1.36
COMMD3-215ENST00000602574 RPL28P46779 137 aaKnown RBP6.55□□□□□ -1.36
COMMD3-215ENST00000602574 MPLKIPQ8TAP9 179 aa6.55□□□□□ -1.36
COMMD3-215ENST00000602574 TMEM141Q96I45 108 aa6.55□□□□□ -1.36
COMMD3-215ENST00000602574 OVOL2Q9BRP0 275 aa6.55□□□□□ -1.36
COMMD3-215ENST00000602574 NTN3O00634 580 aaPredicted RBP6.55□□□□□ -1.36
COMMD3-215ENST00000602574 ZNF73O43830 326 aaPredicted RBP6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms