RNA–Protein interactions for RNA: ENST00000602088.7

SSBP4-213, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-213ENST00000602088 ICOSQ9Y6W8 199 aa11.57□□□□□ -0.56
SSBP4-213ENST00000602088 DNAH2Q9P225 4427 aa11.57□□□□□ -0.56
SSBP4-213ENST00000602088 NKX2-5P52952 324 aaPredicted RBP11.56□□□□□ -0.56
SSBP4-213ENST00000602088 ZNF506Q5JVG8 444 aa11.56□□□□□ -0.56
SSBP4-213ENST00000602088 CFAP126Q5VTH2 177 aa11.56□□□□□ -0.56
SSBP4-213ENST00000602088 ALKAL2Q6UX46 152 aa11.56□□□□□ -0.56
SSBP4-213ENST00000602088 IL36BQ9NZH7 164 aa11.56□□□□□ -0.56
SSBP4-213ENST00000602088 RS1O15537 224 aa11.55□□□□□ -0.56
SSBP4-213ENST00000602088 IFNA1P01562 189 aa11.55□□□□□ -0.56
SSBP4-213ENST00000602088 GATA1P15976 413 aaPredicted RBP11.55□□□□□ -0.56
SSBP4-213ENST00000602088 RPL35P42766 123 aaKnown RBP11.55□□□□□ -0.56
SSBP4-213ENST00000602088 MEF2BQ02080 365 aaPredicted RBP11.55□□□□□ -0.56
SSBP4-213ENST00000602088 MRPL23Q16540 153 aaKnown RBP11.55□□□□□ -0.56
SSBP4-213ENST00000602088 LINC01559Q495D7 138 aa11.55□□□□□ -0.56
SSBP4-213ENST00000602088 PIK3CD-AS1Q5SR53 167 aa11.55□□□□□ -0.56
SSBP4-213ENST00000602088 UPK3BQ9BT76 320 aa11.55□□□□□ -0.56
SSBP4-213ENST00000602088 MRPS16Q9Y3D3 137 aaKnown RBP11.55□□□□□ -0.56
SSBP4-213ENST00000602088 GRIFINA4D1Z8 144 aa11.54□□□□□ -0.56
SSBP4-213ENST00000602088 CIDEAO60543 219 aa11.54□□□□□ -0.56
SSBP4-213ENST00000602088 DERL1Q9BUN8 251 aa11.54□□□□□ -0.56
SSBP4-213ENST00000602088 Q9H8V8 135 aa11.54□□□□□ -0.56
SSBP4-213ENST00000602088 NBDYA0A0U1RRE5 68 aa11.53□□□□□ -0.56
SSBP4-213ENST00000602088 K7EQD1 137 aa11.53□□□□□ -0.56
SSBP4-213ENST00000602088 PDE6DO43924 150 aa11.53□□□□□ -0.56
SSBP4-213ENST00000602088 ARMS2P0C7Q2 107 aa11.53□□□□□ -0.56
SSBP4-213ENST00000602088 BCL2P10415 239 aa11.53□□□□□ -0.56
SSBP4-213ENST00000602088 BOLA1Q9Y3E2 137 aa11.53□□□□□ -0.56
SSBP4-213ENST00000602088 TMSB15BA0A087X1C1 80 aa11.52□□□□□ -0.57
SSBP4-213ENST00000602088 H3BVH4 76 aa11.52□□□□□ -0.57
SSBP4-213ENST00000602088 RTL8CO15255 209 aa11.52□□□□□ -0.57
SSBP4-213ENST00000602088 GYPEP15421 78 aa11.52□□□□□ -0.57
SSBP4-213ENST00000602088 BLOC1S1P78537 153 aa11.52□□□□□ -0.57
SSBP4-213ENST00000602088 LINC00336Q6ZUF6 198 aa11.52□□□□□ -0.57
SSBP4-213ENST00000602088 SCRT2Q9NQ03 307 aa11.52□□□□□ -0.57
SSBP4-213ENST00000602088 VAX2Q9UIW0 290 aa11.52□□□□□ -0.57
SSBP4-213ENST00000602088 TAGLN2P37802 199 aaKnown RBP11.51□□□□□ -0.57
SSBP4-213ENST00000602088 DMRTA1Q5VZB9 504 aa11.51□□□□□ -0.57
SSBP4-213ENST00000602088 PRR27Q6MZM9 219 aa11.51□□□□□ -0.57
SSBP4-213ENST00000602088 LYPD5Q6UWN5 251 aa11.51□□□□□ -0.57
SSBP4-213ENST00000602088 NEGR1Q7Z3B1 354 aa11.51□□□□□ -0.57
SSBP4-213ENST00000602088 SLC25A29Q8N8R3 303 aa11.51□□□□□ -0.57
SSBP4-213ENST00000602088 PCNPQ8WW12 178 aaKnown RBP11.51□□□□□ -0.57
SSBP4-213ENST00000602088 DNAH17Q9UFH2 4485 aa11.5□□□□□ -0.57
SSBP4-213ENST00000602088 IGHV3-73A0A0B4J1V6 119 aa11.5□□□□□ -0.57
SSBP4-213ENST00000602088 TRBV6-4A0A1B0GX49 114 aa11.5□□□□□ -0.57
SSBP4-213ENST00000602088 A8MWV9 139 aa11.5□□□□□ -0.57
SSBP4-213ENST00000602088 IGLV2-8P01709 118 aa11.5□□□□□ -0.57
SSBP4-213ENST00000602088 SRIP30626 198 aa11.5□□□□□ -0.57
SSBP4-213ENST00000602088 CENPWQ5EE01 88 aa11.5□□□□□ -0.57
SSBP4-213ENST00000602088 ZFP2Q6ZN57 461 aa11.5□□□□□ -0.57
SSBP4-213ENST00000602088 LYPD6BQ8NI32 183 aa11.5□□□□□ -0.57
SSBP4-213ENST00000602088 JPT2Q9H910 190 aa11.5□□□□□ -0.57
SSBP4-213ENST00000602088 MED9Q9NWA0 146 aa11.5□□□□□ -0.57
SSBP4-213ENST00000602088 LOC100131303A0A0U1RQF7 123 aa11.49□□□□□ -0.57
SSBP4-213ENST00000602088 RAB19A4D1S5 217 aa11.49□□□□□ -0.57
SSBP4-213ENST00000602088 RPL19P84098 196 aaKnown RBP11.49□□□□□ -0.57
SSBP4-213ENST00000602088 C1orf134Q5TEV5 83 aa11.49□□□□□ -0.57
SSBP4-213ENST00000602088 SYT8Q8NBV8 401 aa11.49□□□□□ -0.57
SSBP4-213ENST00000602088 PARLQ9H300 379 aa11.49□□□□□ -0.57
SSBP4-213ENST00000602088 PHLDA3Q9Y5J5 127 aa11.49□□□□□ -0.57
SSBP4-213ENST00000602088 CXCL1P09341 107 aa11.48□□□□□ -0.57
SSBP4-213ENST00000602088 MED14OSP0DP75 135 aa11.48□□□□□ -0.57
SSBP4-213ENST00000602088 MGST1P10620 155 aaKnown RBP11.48□□□□□ -0.57
SSBP4-213ENST00000602088 UFSP1Q6NVU6 142 aa11.48□□□□□ -0.57
SSBP4-213ENST00000602088 SMIM12Q96EX1 92 aa11.48□□□□□ -0.57
SSBP4-213ENST00000602088 BIRC6Q9NR09 4857 aa11.48□□□□□ -0.57
SSBP4-213ENST00000602088 FAT2Q9NYQ8 4349 aa11.48□□□□□ -0.57
SSBP4-213ENST00000602088 TRBV20OR9-2A0A075B6H5 130 aa11.47□□□□□ -0.57
SSBP4-213ENST00000602088 SIVA1O15304 175 aa11.47□□□□□ -0.57
SSBP4-213ENST00000602088 NXPH4O95158 308 aa11.47□□□□□ -0.57
SSBP4-213ENST00000602088 GNG4P50150 75 aa11.47□□□□□ -0.57
SSBP4-213ENST00000602088 RHOHQ15669 191 aa11.47□□□□□ -0.57
SSBP4-213ENST00000602088 SOHLH1Q5JUK2 328 aa11.47□□□□□ -0.57
SSBP4-213ENST00000602088 SH2D6Q7Z4S9 175 aa11.47□□□□□ -0.57
SSBP4-213ENST00000602088 PRADC1Q9BSG0 188 aa11.47□□□□□ -0.57
SSBP4-213ENST00000602088 SAMD10Q9BYL1 202 aa11.47□□□□□ -0.57
SSBP4-213ENST00000602088 A0A1W2PPQ1 181 aa11.46□□□□□ -0.57
SSBP4-213ENST00000602088 RBFOX3A6NFN3 312 aa11.46□□□□□ -0.57
SSBP4-213ENST00000602088 PRSS29PA6NIE9 313 aa11.46□□□□□ -0.57
SSBP4-213ENST00000602088 M0R381 172 aa11.46□□□□□ -0.57
SSBP4-213ENST00000602088 TTC32Q5I0X7 151 aa11.46□□□□□ -0.57
SSBP4-213ENST00000602088 Q6ZSN1 163 aa11.46□□□□□ -0.57
SSBP4-213ENST00000602088 SFRP2Q96HF1 295 aa11.46□□□□□ -0.57
SSBP4-213ENST00000602088 SSBP4Q9BWG4 385 aaPredicted RBP11.46□□□□□ -0.57
SSBP4-213ENST00000602088 KRTAP1-5Q9BYS1 174 aa11.46□□□□□ -0.57
SSBP4-213ENST00000602088 ZFP82Q8N141 532 aa11.45□□□□□ -0.58
SSBP4-213ENST00000602088 C6orf223Q8N319 242 aa11.45□□□□□ -0.58
SSBP4-213ENST00000602088 HECTD4Q9Y4D8 3996 aa11.45□□□□□ -0.58
SSBP4-213ENST00000602088 C19orf71A6NCJ1 209 aa11.44□□□□□ -0.58
SSBP4-213ENST00000602088 RHODO00212 210 aa11.44□□□□□ -0.58
SSBP4-213ENST00000602088 SNAI2O43623 268 aa11.44□□□□□ -0.58
SSBP4-213ENST00000602088 CRYGDP07320 174 aa11.44□□□□□ -0.58
SSBP4-213ENST00000602088 OR5AL1P0C617 328 aa11.44□□□□□ -0.58
SSBP4-213ENST00000602088 DAZAP1Q96EP5 407 aaKnown RBP11.44□□□□□ -0.58
SSBP4-213ENST00000602088 A0A1B0GVY2 172 aa11.43□□□□□ -0.58
SSBP4-213ENST00000602088 TMEM250H0YL14 139 aa11.43□□□□□ -0.58
SSBP4-213ENST00000602088 TIRAPP58753 221 aa11.43□□□□□ -0.58
SSBP4-213ENST00000602088 OR10AG1Q8NH19 301 aa11.43□□□□□ -0.58
SSBP4-213ENST00000602088 A0A087WWL8 130 aa11.42□□□□□ -0.58
SSBP4-213ENST00000602088 FAM74A4Q5TZK3 123 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms