RNA–Protein interactions for RNA: ENST00000600911.5

IRF3-227, Transcript of interferon regulatory factor 3, humanhuman

TSL 5 BASIC

Gene IRF3, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-227ENST00000600911 NUP35Q8NFH5 326 aa16.43■□□□□ 0.22
IRF3-227ENST00000600911 SPATA25Q9BR10 227 aa16.43■□□□□ 0.22
IRF3-227ENST00000600911 S100A4P26447 101 aaKnown RBP16.42■□□□□ 0.22
IRF3-227ENST00000600911 C16orf74Q96GX8 76 aa16.42■□□□□ 0.22
IRF3-227ENST00000600911 SPINK4O60575 86 aa16.41■□□□□ 0.22
IRF3-227ENST00000600911 FOXA3P55318 350 aaPredicted RBP16.41■□□□□ 0.22
IRF3-227ENST00000600911 ZNF415Q09FC8 603 aa16.41■□□□□ 0.22
IRF3-227ENST00000600911 URGCP-MRPS24S4R325 110 aa16.41■□□□□ 0.22
IRF3-227ENST00000600911 NACAE9PAV3 2078 aa16.41■□□□□ 0.22
IRF3-227ENST00000600911 SMIM9A6NGZ8 99 aa16.41■□□□□ 0.22
IRF3-227ENST00000600911 MIFP14174 115 aa16.41■□□□□ 0.22
IRF3-227ENST00000600911 CTRLP40313 264 aa16.41■□□□□ 0.22
IRF3-227ENST00000600911 GFRA4Q9GZZ7 299 aa16.41■□□□□ 0.22
IRF3-227ENST00000600911 NOP10Q9NPE3 64 aaKnown RBP16.41■□□□□ 0.22
IRF3-227ENST00000600911 TMEM242Q9NWH2 141 aa16.41■□□□□ 0.22
IRF3-227ENST00000600911 MSRB1Q9NZV6 116 aa16.41■□□□□ 0.22
IRF3-227ENST00000600911 CELA1Q9UNI1 258 aa16.41■□□□□ 0.22
IRF3-227ENST00000600911 XKRY2A2RUG3 117 aa16.4■□□□□ 0.22
IRF3-227ENST00000600911 MRPL16Q9NX20 251 aaKnown RBP16.4■□□□□ 0.22
IRF3-227ENST00000600911 FBN3Q75N90 2809 aa16.4■□□□□ 0.22
IRF3-227ENST00000600911 OR5AL1P0C617 328 aa16.39■□□□□ 0.21
IRF3-227ENST00000600911 DMRTA1Q5VZB9 504 aa16.39■□□□□ 0.21
IRF3-227ENST00000600911 ZNF493Q6ZR52 646 aa16.38■□□□□ 0.21
IRF3-227ENST00000600911 JPT2Q9H910 190 aa16.38■□□□□ 0.21
IRF3-227ENST00000600911 NAT8BQ9UHF3 227 aa16.38■□□□□ 0.21
IRF3-227ENST00000600911 FAM231BA6NCW3 169 aa16.37■□□□□ 0.21
IRF3-227ENST00000600911 MED14OSP0DP75 135 aa16.37■□□□□ 0.21
IRF3-227ENST00000600911 Q6ZTI0 123 aa16.37■□□□□ 0.21
IRF3-227ENST00000600911 YPEL4Q96NS1 127 aa16.37■□□□□ 0.21
IRF3-227ENST00000600911 A0A1W2PPQ1 181 aa16.36■□□□□ 0.21
IRF3-227ENST00000600911 SNURFLB1AK76 121 aa16.36■□□□□ 0.21
IRF3-227ENST00000600911 M0R381 172 aa16.36■□□□□ 0.21
IRF3-227ENST00000600911 A0A0J9YWU9 116 aa16.35■□□□□ 0.21
IRF3-227ENST00000600911 DAZ2Q13117 558 aaKnown RBP16.35■□□□□ 0.21
IRF3-227ENST00000600911 FAM222AQ5U5X8 452 aa16.35■□□□□ 0.21
IRF3-227ENST00000600911 MRPL54Q6P161 138 aaKnown RBP16.35■□□□□ 0.21
IRF3-227ENST00000600911 CNFNQ9BYD5 112 aa16.35■□□□□ 0.21
IRF3-227ENST00000600911 PHLDA3Q9Y5J5 127 aa16.35■□□□□ 0.21
IRF3-227ENST00000600911 NXPH4O95158 308 aa16.34■□□□□ 0.21
IRF3-227ENST00000600911 NTF3P20783 257 aa16.34■□□□□ 0.21
IRF3-227ENST00000600911 ELOBQ15370 118 aa16.34■□□□□ 0.21
IRF3-227ENST00000600911 IMMP2LQ96T52 175 aa16.34■□□□□ 0.21
IRF3-227ENST00000600911 TGIF2-C20orf24A0A0A6YYL0 155 aa16.34■□□□□ 0.21
IRF3-227ENST00000600911 M0R2P5 195 aa16.34■□□□□ 0.21
IRF3-227ENST00000600911 ZNF876PQ49A33 203 aa16.34■□□□□ 0.21
IRF3-227ENST00000600911 ZMAT4Q9H898 229 aa16.34■□□□□ 0.21
IRF3-227ENST00000600911 DKK2Q9UBU2 259 aa16.34■□□□□ 0.21
IRF3-227ENST00000600911 TRGV1A0A0A0MS02 117 aa16.33■□□□□ 0.2
IRF3-227ENST00000600911 SPXQ9BT56 116 aa16.33■□□□□ 0.2
IRF3-227ENST00000600911 F2Z2F3 143 aa16.32■□□□□ 0.2
IRF3-227ENST00000600911 SPANXN1Q5VSR9 72 aa16.32■□□□□ 0.2
IRF3-227ENST00000600911 POM121L12Q8N7R1 296 aa16.32■□□□□ 0.2
IRF3-227ENST00000600911 SAMD10Q9BYL1 202 aa16.32■□□□□ 0.2
IRF3-227ENST00000600911 IGHV4-4A0A075B6R2 117 aa16.31■□□□□ 0.2
IRF3-227ENST00000600911 A0A1B0GUT8 65 aa16.31■□□□□ 0.2
IRF3-227ENST00000600911 A0A1B0GXF2 115 aa16.31■□□□□ 0.2
IRF3-227ENST00000600911 GAGE12BA1L429 117 aa16.31■□□□□ 0.2
IRF3-227ENST00000600911 GAGE7O76087 117 aa16.31■□□□□ 0.2
IRF3-227ENST00000600911 GAGE12FP0CL80 117 aa16.31■□□□□ 0.2
IRF3-227ENST00000600911 GAGE12GP0CL81 117 aa16.31■□□□□ 0.2
IRF3-227ENST00000600911 GAGE12IP0CL82 117 aa16.31■□□□□ 0.2
IRF3-227ENST00000600911 CXorf65A6NEN9 183 aa16.3■□□□□ 0.2
IRF3-227ENST00000600911 LINC00612Q8N6U2 182 aa16.3■□□□□ 0.2
IRF3-227ENST00000600911 RASL10AQ92737 203 aa16.3■□□□□ 0.2
IRF3-227ENST00000600911 C11orf68Q9H3H3 251 aaKnown RBP16.3■□□□□ 0.2
IRF3-227ENST00000600911 SMCO4Q9NRQ5 59 aa16.3■□□□□ 0.2
IRF3-227ENST00000600911 KCNIP4Q6PIL6 250 aa16.3■□□□□ 0.2
IRF3-227ENST00000600911 ZFP82Q8N141 532 aa16.3■□□□□ 0.2
IRF3-227ENST00000600911 TWIST1Q15672 202 aa16.29■□□□□ 0.2
IRF3-227ENST00000600911 DEFB130BP0DP73 79 aa16.28■□□□□ 0.2
IRF3-227ENST00000600911 DEFB130AP0DP74 79 aa16.28■□□□□ 0.2
IRF3-227ENST00000600911 CACNG7P62955 275 aa16.28■□□□□ 0.2
IRF3-227ENST00000600911 PTH2Q96A98 100 aa16.28■□□□□ 0.2
IRF3-227ENST00000600911 EVI2AP22794 236 aa16.27■□□□□ 0.2
IRF3-227ENST00000600911 S100PP25815 95 aa16.27■□□□□ 0.2
IRF3-227ENST00000600911 CAMPP49913 170 aa16.27■□□□□ 0.2
IRF3-227ENST00000600911 BTF3L4Q96K17 158 aa16.27■□□□□ 0.2
IRF3-227ENST00000600911 A0A087WWL8 130 aa16.27■□□□□ 0.19
IRF3-227ENST00000600911 LGALS9BQ3B8N2 356 aa16.27■□□□□ 0.19
IRF3-227ENST00000600911 WDR73Q6P4I2 378 aa16.27■□□□□ 0.19
IRF3-227ENST00000600911 KIF25-AS1Q9Y6Z4 181 aa16.27■□□□□ 0.19
IRF3-227ENST00000600911 LYRM9A8MSI8 78 aa16.26■□□□□ 0.19
IRF3-227ENST00000600911 IGHV3-53P01767 116 aa16.26■□□□□ 0.19
IRF3-227ENST00000600911 CFAP126Q5VTH2 177 aa16.26■□□□□ 0.19
IRF3-227ENST00000600911 C14orf178Q8N769 122 aaPredicted RBP16.26■□□□□ 0.19
IRF3-227ENST00000600911 STAB2Q8WWQ8 2551 aa16.25■□□□□ 0.19
IRF3-227ENST00000600911 IGHV3-73A0A0B4J1V6 119 aa16.25■□□□□ 0.19
IRF3-227ENST00000600911 CRYGDP07320 174 aa16.25■□□□□ 0.19
IRF3-227ENST00000600911 NHLRC4P0CG21 123 aaPredicted RBP16.25■□□□□ 0.19
IRF3-227ENST00000600911 RIGQ13278 110 aa16.25■□□□□ 0.19
IRF3-227ENST00000600911 C12orf74Q32Q52 190 aa16.25■□□□□ 0.19
IRF3-227ENST00000600911 ZNF479Q96JC4 524 aa16.25■□□□□ 0.19
IRF3-227ENST00000600911 TRBV24-1A0A075B6N3 115 aa16.24■□□□□ 0.19
IRF3-227ENST00000600911 COLCA2A8K830 154 aa16.24■□□□□ 0.19
IRF3-227ENST00000600911 RS1O15537 224 aa16.24■□□□□ 0.19
IRF3-227ENST00000600911 LINC00315P59091 139 aa16.24■□□□□ 0.19
IRF3-227ENST00000600911 UFSP1Q6NVU6 142 aa16.24■□□□□ 0.19
IRF3-227ENST00000600911 SYT8Q8NBV8 401 aa16.24■□□□□ 0.19
IRF3-227ENST00000600911 TRAV9-1A0A075B6T8 112 aa16.23■□□□□ 0.19
IRF3-227ENST00000600911 SPART-AS1P0CW21 52 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms