RNA–Protein interactions for RNA: ENST00000599227.5

ZNF544-213, Transcript of zinc finger protein 544, humanhuman

TSL 1 (best) BASIC

Gene ZNF544, Length 3,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544-213ENST00000599227 C8orf86Q6ZUL3 223 aa8.62□□□□□ -1.03
ZNF544-213ENST00000599227 IGHV3-16A0A0C4DH30 117 aa8.61□□□□□ -1.03
ZNF544-213ENST00000599227 IGHG4P01861 327 aa8.61□□□□□ -1.03
ZNF544-213ENST00000599227 HIST1H4GQ99525 98 aa8.61□□□□□ -1.03
ZNF544-213ENST00000599227 FABP2P12104 132 aa8.61□□□□□ -1.03
ZNF544-213ENST00000599227 NPC2P61916 151 aa8.61□□□□□ -1.03
ZNF544-213ENST00000599227 LGALS9BQ3B8N2 356 aa8.61□□□□□ -1.03
ZNF544-213ENST00000599227 LGALS9CQ6DKI2 356 aa8.61□□□□□ -1.03
ZNF544-213ENST00000599227 TTC9CQ8N5M4 171 aa8.61□□□□□ -1.03
ZNF544-213ENST00000599227 NPBQ8NG41 125 aa8.61□□□□□ -1.03
ZNF544-213ENST00000599227 NPFFR1Q9GZQ6 430 aa8.61□□□□□ -1.03
ZNF544-213ENST00000599227 NIPBLQ6KC79 2804 aaeCLIP8.61□□□□□ -1.033e-7■■■□□ 17.4
ZNF544-213ENST00000599227 BUB3O43684 328 aa8.61□□□□□ -1.03
ZNF544-213ENST00000599227 RPS20P60866 119 aaKnown RBP8.61□□□□□ -1.03
ZNF544-213ENST00000599227 HSD52Q0P140 79 aa8.61□□□□□ -1.03
ZNF544-213ENST00000599227 DEFB112Q30KQ8 113 aa8.61□□□□□ -1.03
ZNF544-213ENST00000599227 SMIM13P0DJ93 91 aa8.6□□□□□ -1.03
ZNF544-213ENST00000599227 SEC11AP67812 179 aa8.6□□□□□ -1.03
ZNF544-213ENST00000599227 SAMD5Q5TGI4 173 aa8.6□□□□□ -1.03
ZNF544-213ENST00000599227 RNF185Q96GF1 192 aa8.6□□□□□ -1.03
ZNF544-213ENST00000599227 AVPP01185 164 aa8.6□□□□□ -1.03
ZNF544-213ENST00000599227 CD300EQ496F6 205 aaPredicted RBP8.6□□□□□ -1.03
ZNF544-213ENST00000599227 FAM159AQ6UWV7 190 aa8.6□□□□□ -1.03
ZNF544-213ENST00000599227 DYNLRB2Q8TF09 96 aa8.6□□□□□ -1.03
ZNF544-213ENST00000599227 CHAC1Q9BUX1 264 aa8.6□□□□□ -1.03
ZNF544-213ENST00000599227 ZFHX3Q15911 3703 aa8.6□□□□□ -1.03
ZNF544-213ENST00000599227 FGF6P10767 208 aa8.6□□□□□ -1.03
ZNF544-213ENST00000599227 UBE2E1P51965 193 aa8.6□□□□□ -1.03
ZNF544-213ENST00000599227 RPL39LQ96EH5 51 aaKnown RBP8.6□□□□□ -1.03
ZNF544-213ENST00000599227 CYSLTR1Q9Y271 337 aa8.6□□□□□ -1.03
ZNF544-213ENST00000599227 C9orf118A6NHY6 69 aa8.59□□□□□ -1.03
ZNF544-213ENST00000599227 KRTAP10-9P60411 292 aa8.59□□□□□ -1.03
ZNF544-213ENST00000599227 LMO4P61968 165 aa8.59□□□□□ -1.03
ZNF544-213ENST00000599227 ZNF493Q6ZR52 646 aa8.59□□□□□ -1.03
ZNF544-213ENST00000599227 BOD1L2Q8IYS8 172 aa8.59□□□□□ -1.03
ZNF544-213ENST00000599227 LY6G5BQ8NDX9 201 aa8.59□□□□□ -1.03
ZNF544-213ENST00000599227 CCDC140Q96MF4 163 aa8.59□□□□□ -1.03
ZNF544-213ENST00000599227 IGHV1-69DA0A0B4J2H0 117 aa8.59□□□□□ -1.03
ZNF544-213ENST00000599227 M0R1W7 72 aa8.59□□□□□ -1.03
ZNF544-213ENST00000599227 IGHV1-69P01742 117 aa8.59□□□□□ -1.03
ZNF544-213ENST00000599227 MOB4Q9Y3A3 225 aa8.59□□□□□ -1.03
ZNF544-213ENST00000599227 NDUFS8O00217 210 aa8.58□□□□□ -1.04
ZNF544-213ENST00000599227 DPM2O94777 84 aa8.58□□□□□ -1.04
ZNF544-213ENST00000599227 SRSF9Q13242 221 aaKnown RBP eCLIP8.58□□□□□ -1.04
ZNF544-213ENST00000599227 TMEM170BQ5T4T1 132 aa8.58□□□□□ -1.04
ZNF544-213ENST00000599227 MSMBP08118 114 aa8.58□□□□□ -1.04
ZNF544-213ENST00000599227 CFHR3Q02985 330 aa8.58□□□□□ -1.04
ZNF544-213ENST00000599227 SCGB3A1Q96QR1 104 aa8.58□□□□□ -1.04
ZNF544-213ENST00000599227 IGLC6P0CF74 106 aa8.58□□□□□ -1.04
ZNF544-213ENST00000599227 ODF1Q14990 250 aa8.58□□□□□ -1.04
ZNF544-213ENST00000599227 NXT2Q9NPJ8 142 aaKnown RBP8.58□□□□□ -1.04
ZNF544-213ENST00000599227 TRBV25-1A0A075B6N4 114 aa8.57□□□□□ -1.04
ZNF544-213ENST00000599227 APOMO95445 188 aa8.57□□□□□ -1.04
ZNF544-213ENST00000599227 PRSS2P07478 247 aa8.57□□□□□ -1.04
ZNF544-213ENST00000599227 PRR9Q5T870 116 aa8.57□□□□□ -1.04
ZNF544-213ENST00000599227 MAPKAPK5-AS1Q8N8E1 139 aa8.57□□□□□ -1.04
ZNF544-213ENST00000599227 IGHV3-38A0A0C4DH36 116 aa8.57□□□□□ -1.04
ZNF544-213ENST00000599227 ODF3BA8MYP8 253 aa8.57□□□□□ -1.04
ZNF544-213ENST00000599227 ANXA2RQ3ZCQ2 193 aa8.57□□□□□ -1.04
ZNF544-213ENST00000599227 OR1N2Q8NGR9 330 aa8.57□□□□□ -1.04
ZNF544-213ENST00000599227 PHLDA1Q8WV24 401 aaPredicted RBP8.57□□□□□ -1.04
ZNF544-213ENST00000599227 SRSF8Q9BRL6 282 aaKnown RBP8.57□□□□□ -1.04
ZNF544-213ENST00000599227 LOC107984156A0A0G2JMH3 177 aa8.57□□□□□ -1.04
ZNF544-213ENST00000599227 LAGE3Q14657 143 aa8.57□□□□□ -1.04
ZNF544-213ENST00000599227 ARL17AQ8IVW1 177 aa8.57□□□□□ -1.04
ZNF544-213ENST00000599227 MXRA5Q9NR99 2828 aa8.57□□□□□ -1.04
ZNF544-213ENST00000599227 H3BRM9 83 aa8.56□□□□□ -1.04
ZNF544-213ENST00000599227 OR9G4Q8NGQ1 327 aa8.56□□□□□ -1.04
ZNF544-213ENST00000599227 CSTL1Q9H114 145 aa8.56□□□□□ -1.04
ZNF544-213ENST00000599227 SETXQ7Z333 2677 aaKnown RBP8.56□□□□□ -1.04
ZNF544-213ENST00000599227 A0A1W2PPM0 123 aa8.56□□□□□ -1.04
ZNF544-213ENST00000599227 H3BMG7 143 aa8.56□□□□□ -1.04
ZNF544-213ENST00000599227 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.56□□□□□ -1.04
ZNF544-213ENST00000599227 SMAGPQ0VAQ4 97 aa8.56□□□□□ -1.04
ZNF544-213ENST00000599227 FAM110DQ8TAY7 271 aaPredicted RBP8.56□□□□□ -1.04
ZNF544-213ENST00000599227 AJUBAQ96IF1 538 aa8.56□□□□□ -1.04
ZNF544-213ENST00000599227 HOXA3O43365 443 aaPredicted RBP8.55□□□□□ -1.04
ZNF544-213ENST00000599227 PPBPP02775 128 aa8.55□□□□□ -1.04
ZNF544-213ENST00000599227 NSUN5P1Q3KNT7 163 aa8.55□□□□□ -1.04
ZNF544-213ENST00000599227 SH2D6Q7Z4S9 175 aa8.55□□□□□ -1.04
ZNF544-213ENST00000599227 C20orf173Q96LM9 149 aa8.55□□□□□ -1.04
ZNF544-213ENST00000599227 Q96MF0 132 aa8.55□□□□□ -1.04
ZNF544-213ENST00000599227 GTSF1LQ9H1H1 148 aa8.55□□□□□ -1.04
ZNF544-213ENST00000599227 ADARB2-AS1A8MUL3 147 aa8.55□□□□□ -1.04
ZNF544-213ENST00000599227 C18orf65Q6ZTR6 163 aa8.55□□□□□ -1.04
ZNF544-213ENST00000599227 APRG1Q8IVJ8 170 aa8.55□□□□□ -1.04
ZNF544-213ENST00000599227 ZFAND3Q9H8U3 227 aa8.55□□□□□ -1.04
ZNF544-213ENST00000599227 K7EP34 96 aa8.55□□□□□ -1.04
ZNF544-213ENST00000599227 ASIPP42127 132 aa8.55□□□□□ -1.04
ZNF544-213ENST00000599227 SRSF1Q07955 248 aaKnown RBP eCLIP8.55□□□□□ -1.042e-6■□□□□ 8.5
ZNF544-213ENST00000599227 ADAMTSL5Q6ZMM2 481 aa8.55□□□□□ -1.04
ZNF544-213ENST00000599227 SLC50A1Q9BRV3 221 aa8.55□□□□□ -1.04
ZNF544-213ENST00000599227 XCL2Q9UBD3 114 aa8.55□□□□□ -1.04
ZNF544-213ENST00000599227 TRAV8-2A0A0B4J237 113 aa8.54□□□□□ -1.04
ZNF544-213ENST00000599227 CLPSL1A2RUU4 121 aa8.54□□□□□ -1.04
ZNF544-213ENST00000599227 OR11H12B2RN74 326 aa8.54□□□□□ -1.04
ZNF544-213ENST00000599227 DEFB131AP59861 70 aa8.54□□□□□ -1.04
ZNF544-213ENST00000599227 Q1RN00 199 aa8.54□□□□□ -1.04
ZNF544-213ENST00000599227 ETDBQ3ZM63 59 aa8.54□□□□□ -1.04
ZNF544-213ENST00000599227 KLHL30-AS1Q8NEE0 82 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms