RNA–Protein interactions for RNA: ENST00000596788.1

IRF3-214, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 447 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-214ENST00000596788 A0A1W2PPQ1 181 aa14.96□□□□□ -0.01
IRF3-214ENST00000596788 FAM231BA6NCW3 169 aa14.96□□□□□ -0.01
IRF3-214ENST00000596788 OR5AL1P0C617 328 aa14.96□□□□□ -0.01
IRF3-214ENST00000596788 EMP1P54849 157 aa14.96□□□□□ -0.01
IRF3-214ENST00000596788 LYZL1Q6UWQ5 148 aa14.96□□□□□ -0.01
IRF3-214ENST00000596788 OR10AG1Q8NH19 301 aa14.96□□□□□ -0.01
IRF3-214ENST00000596788 PGLYRP4Q96LB8 373 aa14.96□□□□□ -0.01
IRF3-214ENST00000596788 ZMAT4Q9H898 229 aa14.96□□□□□ -0.01
IRF3-214ENST00000596788 MUC21A0A0G2JKD1 596 aa14.95□□□□□ -0.02
IRF3-214ENST00000596788 MUC21A0A140T8X8 626 aa14.95□□□□□ -0.02
IRF3-214ENST00000596788 SNURFLB1AK76 121 aa14.95□□□□□ -0.02
IRF3-214ENST00000596788 FOXA3P55318 350 aaPredicted RBP14.95□□□□□ -0.02
IRF3-214ENST00000596788 NUP35Q8NFH5 326 aa14.95□□□□□ -0.02
IRF3-214ENST00000596788 TENM3Q9P273 2699 aa14.95□□□□□ -0.02
IRF3-214ENST00000596788 SPXQ9BT56 116 aa14.94□□□□□ -0.02
IRF3-214ENST00000596788 NOP10Q9NPE3 64 aaKnown RBP14.94□□□□□ -0.02
IRF3-214ENST00000596788 NAT8BQ9UHF3 227 aa14.94□□□□□ -0.02
IRF3-214ENST00000596788 FAM3BP58499 235 aaPredicted RBP14.93□□□□□ -0.02
IRF3-214ENST00000596788 DAZ2Q13117 558 aaKnown RBP14.93□□□□□ -0.02
IRF3-214ENST00000596788 IMMP2LQ96T52 175 aa14.93□□□□□ -0.02
IRF3-214ENST00000596788 C11orf68Q9H3H3 251 aaKnown RBP14.93□□□□□ -0.02
IRF3-214ENST00000596788 MRPL16Q9NX20 251 aaKnown RBP14.93□□□□□ -0.02
IRF3-214ENST00000596788 PHLDA3Q9Y5J5 127 aa14.93□□□□□ -0.02
IRF3-214ENST00000596788 F2Z2F3 143 aa14.92□□□□□ -0.02
IRF3-214ENST00000596788 NXPH4O95158 308 aa14.92□□□□□ -0.02
IRF3-214ENST00000596788 CNFNQ9BYD5 112 aa14.92□□□□□ -0.02
IRF3-214ENST00000596788 M0R2P5 195 aa14.91□□□□□ -0.02
IRF3-214ENST00000596788 M0R381 172 aa14.91□□□□□ -0.02
IRF3-214ENST00000596788 SPINK4O60575 86 aa14.91□□□□□ -0.02
IRF3-214ENST00000596788 CBLN2Q8IUK8 224 aa14.91□□□□□ -0.02
IRF3-214ENST00000596788 URGCP-MRPS24S4R325 110 aa14.91□□□□□ -0.02
IRF3-214ENST00000596788 A0A0J9YWU9 116 aa14.9□□□□□ -0.02
IRF3-214ENST00000596788 SCO1O75880 301 aa14.9□□□□□ -0.02
IRF3-214ENST00000596788 NHLRC4P0CG21 123 aaPredicted RBP14.9□□□□□ -0.02
IRF3-214ENST00000596788 SSTP61278 116 aa14.9□□□□□ -0.02
IRF3-214ENST00000596788 TMEM88Q6PEY1 159 aa14.9□□□□□ -0.02
IRF3-214ENST00000596788 KCNIP4Q6PIL6 250 aa14.9□□□□□ -0.02
IRF3-214ENST00000596788 Q6ZTI0 123 aa14.9□□□□□ -0.02
IRF3-214ENST00000596788 ZFP82Q8N141 532 aa14.9□□□□□ -0.02
IRF3-214ENST00000596788 CELA1Q9UNI1 258 aa14.9□□□□□ -0.02
IRF3-214ENST00000596788 TRGV1A0A0A0MS02 117 aa14.89□□□□□ -0.03
IRF3-214ENST00000596788 CXorf65A6NEN9 183 aa14.89□□□□□ -0.03
IRF3-214ENST00000596788 CACNG7P62955 275 aa14.89□□□□□ -0.03
IRF3-214ENST00000596788 FAM222AQ5U5X8 452 aa14.89□□□□□ -0.03
IRF3-214ENST00000596788 SPANXN1Q5VSR9 72 aa14.89□□□□□ -0.03
IRF3-214ENST00000596788 DMRTA1Q5VZB9 504 aa14.89□□□□□ -0.03
IRF3-214ENST00000596788 PTH2Q96A98 100 aa14.89□□□□□ -0.03
IRF3-214ENST00000596788 DKK2Q9UBU2 259 aa14.89□□□□□ -0.03
IRF3-214ENST00000596788 IGHV4-4A0A075B6R2 117 aa14.88□□□□□ -0.03
IRF3-214ENST00000596788 A0A1B0GUT8 65 aa14.88□□□□□ -0.03
IRF3-214ENST00000596788 S100PP25815 95 aa14.88□□□□□ -0.03
IRF3-214ENST00000596788 ZNF876PQ49A33 203 aa14.88□□□□□ -0.03
IRF3-214ENST00000596788 WDR73Q6P4I2 378 aa14.88□□□□□ -0.03
IRF3-214ENST00000596788 LINC00612Q8N6U2 182 aa14.88□□□□□ -0.03
IRF3-214ENST00000596788 SYT8Q8NBV8 401 aa14.88□□□□□ -0.03
IRF3-214ENST00000596788 BORCS7Q96B45 105 aa14.88□□□□□ -0.03
IRF3-214ENST00000596788 MSRB1Q9NZV6 116 aa14.88□□□□□ -0.03
IRF3-214ENST00000596788 LYRM9A8MSI8 78 aa14.87□□□□□ -0.03
IRF3-214ENST00000596788 LGALS9BQ3B8N2 356 aa14.87□□□□□ -0.03
IRF3-214ENST00000596788 MRPL54Q6P161 138 aaKnown RBP14.87□□□□□ -0.03
IRF3-214ENST00000596788 RASL10AQ92737 203 aa14.87□□□□□ -0.03
IRF3-214ENST00000596788 SMCO4Q9NRQ5 59 aa14.87□□□□□ -0.03
IRF3-214ENST00000596788 TRAV9-1A0A075B6T8 112 aa14.86□□□□□ -0.03
IRF3-214ENST00000596788 GAGE12BA1L429 117 aa14.86□□□□□ -0.03
IRF3-214ENST00000596788 GAGE7O76087 117 aa14.86□□□□□ -0.03
IRF3-214ENST00000596788 GAGE12FP0CL80 117 aa14.86□□□□□ -0.03
IRF3-214ENST00000596788 GAGE12GP0CL81 117 aa14.86□□□□□ -0.03
IRF3-214ENST00000596788 GAGE12IP0CL82 117 aa14.86□□□□□ -0.03
IRF3-214ENST00000596788 NTF3P20783 257 aa14.86□□□□□ -0.03
IRF3-214ENST00000596788 BTF3L4Q96K17 158 aa14.86□□□□□ -0.03
IRF3-214ENST00000596788 YPEL4Q96NS1 127 aa14.86□□□□□ -0.03
IRF3-214ENST00000596788 NACAE9PAV3 2078 aa14.86□□□□□ -0.03
IRF3-214ENST00000596788 FBN3Q75N90 2809 aa14.85□□□□□ -0.03
IRF3-214ENST00000596788 COL7A1Q02388 2944 aa14.85□□□□□ -0.03
IRF3-214ENST00000596788 A0A1B0GXF2 115 aa14.85□□□□□ -0.03
IRF3-214ENST00000596788 RIGQ13278 110 aa14.85□□□□□ -0.03
IRF3-214ENST00000596788 ELOBQ15370 118 aa14.85□□□□□ -0.03
IRF3-214ENST00000596788 TWIST1Q15672 202 aa14.85□□□□□ -0.03
IRF3-214ENST00000596788 PIK3CD-AS1Q5SR53 167 aa14.85□□□□□ -0.03
IRF3-214ENST00000596788 JPT2Q9H910 190 aa14.85□□□□□ -0.03
IRF3-214ENST00000596788 SPART-AS1P0CW21 52 aa14.84□□□□□ -0.03
IRF3-214ENST00000596788 ATP5L2Q7Z4Y8 100 aa14.84□□□□□ -0.03
IRF3-214ENST00000596788 TGIF2-C20orf24A0A0A6YYL0 155 aa14.83□□□□□ -0.04
IRF3-214ENST00000596788 DEFB130BP0DP73 79 aa14.83□□□□□ -0.04
IRF3-214ENST00000596788 DEFB130AP0DP74 79 aa14.83□□□□□ -0.04
IRF3-214ENST00000596788 AP1S3Q96PC3 154 aa14.83□□□□□ -0.04
IRF3-214ENST00000596788 NDUFAF3Q9BU61 184 aa14.83□□□□□ -0.04
IRF3-214ENST00000596788 TEX48A0A1B0GUV7 120 aa14.82□□□□□ -0.04
IRF3-214ENST00000596788 HBBP68871 147 aa14.82□□□□□ -0.04
IRF3-214ENST00000596788 POM121L12Q8N7R1 296 aa14.82□□□□□ -0.04
IRF3-214ENST00000596788 U3KQK5 164 aa14.82□□□□□ -0.04
IRF3-214ENST00000596788 RS1O15537 224 aa14.81□□□□□ -0.04
IRF3-214ENST00000596788 CAMPP49913 170 aa14.81□□□□□ -0.04
IRF3-214ENST00000596788 CFAP126Q5VTH2 177 aa14.81□□□□□ -0.04
IRF3-214ENST00000596788 SAMD10Q9BYL1 202 aa14.81□□□□□ -0.04
IRF3-214ENST00000596788 TRBV24-1A0A075B6N3 115 aa14.8□□□□□ -0.04
IRF3-214ENST00000596788 TRGV2A0A075B6R0 118 aa14.8□□□□□ -0.04
IRF3-214ENST00000596788 A0A1B0GW15 77 aa14.8□□□□□ -0.04
IRF3-214ENST00000596788 A8MWV9 139 aa14.8□□□□□ -0.04
IRF3-214ENST00000596788 TRGC1P0CF51 173 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms