RNA–Protein interactions for RNA: ENST00000589351.5

DNMT1-220, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 672 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-220ENST00000589351 C18orf15Q96N68 181 aa3.8□□□□□ -1.8
DNMT1-220ENST00000589351 ODF3Q96PU9 254 aa3.8□□□□□ -1.8
DNMT1-220ENST00000589351 SLC25A21Q9BQT8 299 aaPredicted RBP3.8□□□□□ -1.8
DNMT1-220ENST00000589351 ARV1Q9H2C2 271 aa3.8□□□□□ -1.8
DNMT1-220ENST00000589351 MIXL1Q9H2W2 232 aa3.8□□□□□ -1.8
DNMT1-220ENST00000589351 ZNF331Q9NQX6 463 aaPredicted RBP3.8□□□□□ -1.8
DNMT1-220ENST00000589351 FUT9Q9Y231 359 aa3.8□□□□□ -1.8
DNMT1-220ENST00000589351 KLF12Q9Y4X4 402 aa3.8□□□□□ -1.8
DNMT1-220ENST00000589351 LY96Q9Y6Y9 160 aa3.8□□□□□ -1.8
DNMT1-220ENST00000589351 TGIF2-C20orf24A0A0A6YYL0 155 aa3.79□□□□□ -1.8
DNMT1-220ENST00000589351 A0A1B0GV72 72 aa3.79□□□□□ -1.8
DNMT1-220ENST00000589351 H3BP45 60 aa3.79□□□□□ -1.8
DNMT1-220ENST00000589351 ARPC5O15511 151 aa3.79□□□□□ -1.8
DNMT1-220ENST00000589351 PSCAO43653 123 aa3.79□□□□□ -1.8
DNMT1-220ENST00000589351 COX7A2P2O60397 106 aa3.79□□□□□ -1.8
DNMT1-220ENST00000589351 ZNF324O75467 553 aaPredicted RBP3.79□□□□□ -1.8
DNMT1-220ENST00000589351 NXPH4O95158 308 aa3.79□□□□□ -1.8
DNMT1-220ENST00000589351 SFT2D2O95562 160 aa3.79□□□□□ -1.8
DNMT1-220ENST00000589351 PTTG1O95997 202 aa3.79□□□□□ -1.8
DNMT1-220ENST00000589351 RPL19P84098 196 aaKnown RBP3.79□□□□□ -1.8
DNMT1-220ENST00000589351 ZNF726P1Q15940 193 aa3.79□□□□□ -1.8
DNMT1-220ENST00000589351 GFI1BQ5VTD9 330 aa3.79□□□□□ -1.8
DNMT1-220ENST00000589351 C10orf113Q5VZT2 155 aa3.79□□□□□ -1.8
DNMT1-220ENST00000589351 Q6ZTI0 123 aa3.79□□□□□ -1.8
DNMT1-220ENST00000589351 FAM19A5Q7Z5A7 132 aaPredicted RBP3.79□□□□□ -1.8
DNMT1-220ENST00000589351 TOMM5Q8N4H5 51 aa3.79□□□□□ -1.8
DNMT1-220ENST00000589351 C12orf45Q8N5I9 185 aaPredicted RBP3.79□□□□□ -1.8
DNMT1-220ENST00000589351 EIF4E3Q8N5X7 224 aaKnown RBP3.79□□□□□ -1.8
DNMT1-220ENST00000589351 MCFD2Q8NI22 146 aa3.79□□□□□ -1.8
DNMT1-220ENST00000589351 DEDD2Q8WXF8 326 aa3.79□□□□□ -1.8
DNMT1-220ENST00000589351 SMIM8Q96KF7 97 aa3.79□□□□□ -1.8
DNMT1-220ENST00000589351 PPDPFQ9H3Y8 114 aa3.79□□□□□ -1.8
DNMT1-220ENST00000589351 PRO0255Q9UI72 69 aa3.79□□□□□ -1.8
DNMT1-220ENST00000589351 HHLA3Q9XRX5 114 aa3.79□□□□□ -1.8
DNMT1-220ENST00000589351 LRP1BQ9NZR2 4599 aa3.78□□□□□ -1.8
DNMT1-220ENST00000589351 A0A087WTM6 91 aa3.78□□□□□ -1.8
DNMT1-220ENST00000589351 TRGV1A0A0A0MS02 117 aa3.78□□□□□ -1.8
DNMT1-220ENST00000589351 K7EPK0 472 aa3.78□□□□□ -1.8
DNMT1-220ENST00000589351 SMR3BP02814 79 aaPredicted RBP3.78□□□□□ -1.8
DNMT1-220ENST00000589351 GPX1P07203 203 aa3.78□□□□□ -1.8
DNMT1-220ENST00000589351 PVALBP20472 110 aaPredicted RBP3.78□□□□□ -1.8
DNMT1-220ENST00000589351 AMTP48728 403 aa3.78□□□□□ -1.8
DNMT1-220ENST00000589351 TAS2R30P59541 319 aa3.78□□□□□ -1.8
DNMT1-220ENST00000589351 RRAS2P62070 204 aaPredicted RBP3.78□□□□□ -1.8
DNMT1-220ENST00000589351 RPL32P62910 135 aaKnown RBP3.78□□□□□ -1.8
DNMT1-220ENST00000589351 FLI1Q01543 452 aaPredicted RBP3.78□□□□□ -1.8
DNMT1-220ENST00000589351 CD300CQ08708 224 aa3.78□□□□□ -1.8
DNMT1-220ENST00000589351 TRIQKQ629K1 86 aa3.78□□□□□ -1.8
DNMT1-220ENST00000589351 LYPD5Q6UWN5 251 aa3.78□□□□□ -1.8
DNMT1-220ENST00000589351 PATE2Q6UY27 113 aa3.78□□□□□ -1.8
DNMT1-220ENST00000589351 Q6ZRN7 208 aaPredicted RBP3.78□□□□□ -1.8
DNMT1-220ENST00000589351 NEGR1Q7Z3B1 354 aa3.78□□□□□ -1.8
DNMT1-220ENST00000589351 C10orf126Q8N4M7 172 aa3.78□□□□□ -1.8
DNMT1-220ENST00000589351 ZNF431Q8TF32 576 aaPredicted RBP3.78□□□□□ -1.8
DNMT1-220ENST00000589351 PCNPQ8WW12 178 aaKnown RBP3.78□□□□□ -1.8
DNMT1-220ENST00000589351 VSIG2Q96IQ7 327 aa3.78□□□□□ -1.8
DNMT1-220ENST00000589351 LINC00477Q96M19 166 aa3.78□□□□□ -1.8
DNMT1-220ENST00000589351 PFDN5Q99471 154 aa3.78□□□□□ -1.8
DNMT1-220ENST00000589351 LINC00467Q9BRT7 94 aa3.78□□□□□ -1.8
DNMT1-220ENST00000589351 GGACTQ9BVM4 153 aa3.78□□□□□ -1.8
DNMT1-220ENST00000589351 IGLV5-52A0A0A0MRZ9 124 aa3.77□□□□□ -1.81
DNMT1-220ENST00000589351 TRGV4A0A0C4DH28 118 aa3.77□□□□□ -1.81
DNMT1-220ENST00000589351 LOC100131303A0A0U1RQF7 123 aa3.77□□□□□ -1.81
DNMT1-220ENST00000589351 C7orf71A4D174 169 aa3.77□□□□□ -1.81
DNMT1-220ENST00000589351 AGPAT2O15120 278 aa3.77□□□□□ -1.81
DNMT1-220ENST00000589351 SSSCA1O60232 199 aa3.77□□□□□ -1.81
DNMT1-220ENST00000589351 SPINK4O60575 86 aa3.77□□□□□ -1.81
DNMT1-220ENST00000589351 ZNF253O75346 499 aa3.77□□□□□ -1.81
DNMT1-220ENST00000589351 NMBP08949 121 aa3.77□□□□□ -1.81
DNMT1-220ENST00000589351 METTL15P1P0C7V9 234 aa3.77□□□□□ -1.81
DNMT1-220ENST00000589351 CT45A10P0DMU9 189 aa3.77□□□□□ -1.81
DNMT1-220ENST00000589351 SRIP30626 198 aa3.77□□□□□ -1.81
DNMT1-220ENST00000589351 RNASE4P34096 147 aaKnown RBP3.77□□□□□ -1.81
DNMT1-220ENST00000589351 INPP1P49441 399 aa3.77□□□□□ -1.81
DNMT1-220ENST00000589351 HNRNPA3P51991 378 aaKnown RBP3.77□□□□□ -1.81
DNMT1-220ENST00000589351 PPP1R1AQ13522 171 aa3.77□□□□□ -1.81
DNMT1-220ENST00000589351 PYDC2Q56P42 97 aa3.77□□□□□ -1.81
DNMT1-220ENST00000589351 IBA57Q5T440 356 aaKnown RBP3.77□□□□□ -1.81
DNMT1-220ENST00000589351 TMEM78Q5T7P6 136 aa3.77□□□□□ -1.81
DNMT1-220ENST00000589351 SH2D6Q7Z4S9 175 aa3.77□□□□□ -1.81
DNMT1-220ENST00000589351 NRACQ8N912 160 aa3.77□□□□□ -1.81
DNMT1-220ENST00000589351 RAB2BQ8WUD1 216 aa3.77□□□□□ -1.81
DNMT1-220ENST00000589351 ST6GAL2Q96JF0 529 aa3.77□□□□□ -1.81
DNMT1-220ENST00000589351 TXNDC17Q9BRA2 123 aa3.77□□□□□ -1.81
DNMT1-220ENST00000589351 TMEM70Q9BUB7 260 aa3.77□□□□□ -1.81
DNMT1-220ENST00000589351 MRPL32Q9BYC8 188 aaKnown RBP3.77□□□□□ -1.81
DNMT1-220ENST00000589351 C20orf85Q9H1P6 137 aa3.77□□□□□ -1.81
DNMT1-220ENST00000589351 MAP1LC3AQ9H492 121 aa3.77□□□□□ -1.81
DNMT1-220ENST00000589351 MDFICQ9P1T7 246 aa3.77□□□□□ -1.81
DNMT1-220ENST00000589351 TIMM9Q9Y5J7 89 aa3.77□□□□□ -1.81
DNMT1-220ENST00000589351 TRAV5A0A0B4J249 113 aa3.76□□□□□ -1.81
DNMT1-220ENST00000589351 C9orf170A2RU37 121 aa3.76□□□□□ -1.81
DNMT1-220ENST00000589351 PRAC2D3DTV9 90 aa3.76□□□□□ -1.81
DNMT1-220ENST00000589351 SSNA1O43805 119 aa3.76□□□□□ -1.81
DNMT1-220ENST00000589351 PPBPP02775 128 aa3.76□□□□□ -1.81
DNMT1-220ENST00000589351 SNRPCP09234 159 aaKnown RBP3.76□□□□□ -1.81
DNMT1-220ENST00000589351 PRB4P10163 310 aaPredicted RBP3.76□□□□□ -1.81
DNMT1-220ENST00000589351 TMBIM6P55061 237 aa3.76□□□□□ -1.81
DNMT1-220ENST00000589351 TCL1AP56279 114 aa3.76□□□□□ -1.81
DNMT1-220ENST00000589351 KRTAP10-1P60331 282 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms