RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 IGHV4-30-4P0DP06 118 aa16.21■□□□□ 0.18
ATG4D-209ENST00000588857 RNASE3P12724 160 aaKnown RBP16.21■□□□□ 0.18
ATG4D-209ENST00000588857 NTF3P20783 257 aa16.21■□□□□ 0.18
ATG4D-209ENST00000588857 APOC4P55056 127 aa16.21■□□□□ 0.18
ATG4D-209ENST00000588857 CACNG7P62955 275 aa16.21■□□□□ 0.18
ATG4D-209ENST00000588857 SPANXN1Q5VSR9 72 aa16.21■□□□□ 0.18
ATG4D-209ENST00000588857 OR10AG1Q8NH19 301 aa16.21■□□□□ 0.18
ATG4D-209ENST00000588857 KIR2DL5BA0A0G2JN68 375 aa16.2■□□□□ 0.18
ATG4D-209ENST00000588857 KIR2DL5BA0A0G2JPC4 375 aa16.2■□□□□ 0.18
ATG4D-209ENST00000588857 TRGC2P03986 189 aa16.2■□□□□ 0.18
ATG4D-209ENST00000588857 TMEM136Q6ZRR5 245 aa16.2■□□□□ 0.18
ATG4D-209ENST00000588857 KIR2DL5AQ8N109 375 aa16.2■□□□□ 0.18
ATG4D-209ENST00000588857 KIR2DL5BQ8NHK3 375 aa16.2■□□□□ 0.18
ATG4D-209ENST00000588857 FRZBQ92765 325 aa16.2■□□□□ 0.18
ATG4D-209ENST00000588857 SCRT2Q9NQ03 307 aa16.2■□□□□ 0.18
ATG4D-209ENST00000588857 MDFICQ9P1T7 246 aa16.2■□□□□ 0.18
ATG4D-209ENST00000588857 C1orf196B1AJZ1 125 aa16.19■□□□□ 0.18
ATG4D-209ENST00000588857 HLA-DQA1P01909 254 aa16.19■□□□□ 0.18
ATG4D-209ENST00000588857 CSNK1G2-AS1Q8NCQ2 148 aa16.19■□□□□ 0.18
ATG4D-209ENST00000588857 KPRPQ5T749 579 aaPredicted RBP16.18■□□□□ 0.18
ATG4D-209ENST00000588857 TMA7Q9Y2S6 64 aaKnown RBP16.18■□□□□ 0.18
ATG4D-209ENST00000588857 MUC4Q99102 2169 aa16.18■□□□□ 0.18
ATG4D-209ENST00000588857 FABP9Q0Z7S8 132 aa16.17■□□□□ 0.18
ATG4D-209ENST00000588857 MRPL18Q9H0U6 180 aaKnown RBP16.17■□□□□ 0.18
ATG4D-209ENST00000588857 IGHV4-4A0A075B6R2 117 aa16.17■□□□□ 0.18
ATG4D-209ENST00000588857 M0R381 172 aa16.17■□□□□ 0.18
ATG4D-209ENST00000588857 PRM2P04554 102 aa16.17■□□□□ 0.18
ATG4D-209ENST00000588857 ZNF415Q09FC8 603 aa16.17■□□□□ 0.18
ATG4D-209ENST00000588857 C9orf85Q96MD7 179 aa16.17■□□□□ 0.18
ATG4D-209ENST00000588857 MSRB1Q9NZV6 116 aa16.17■□□□□ 0.18
ATG4D-209ENST00000588857 SPRY2O43597 315 aa16.15■□□□□ 0.18
ATG4D-209ENST00000588857 ZNF705AQ6ZN79 300 aaPredicted RBP16.15■□□□□ 0.18
ATG4D-209ENST00000588857 ZFP82Q8N141 532 aa16.15■□□□□ 0.18
ATG4D-209ENST00000588857 APCSP02743 223 aa16.14■□□□□ 0.17
ATG4D-209ENST00000588857 UBE2CO00762 179 aa16.13■□□□□ 0.17
ATG4D-209ENST00000588857 RAB5BP61020 215 aa16.13■□□□□ 0.17
ATG4D-209ENST00000588857 ZNF493Q6ZR52 646 aa16.13■□□□□ 0.17
ATG4D-209ENST00000588857 SMIM15Q7Z3B0 74 aa16.13■□□□□ 0.17
ATG4D-209ENST00000588857 GATD1Q8NB37 220 aa16.13■□□□□ 0.17
ATG4D-209ENST00000588857 SYT8Q8NBV8 401 aa16.13■□□□□ 0.17
ATG4D-209ENST00000588857 A8MZ25 164 aa16.13■□□□□ 0.17
ATG4D-209ENST00000588857 AZU1P20160 251 aa16.13■□□□□ 0.17
ATG4D-209ENST00000588857 GSN-AS1Q9NRJ2 163 aa16.13■□□□□ 0.17
ATG4D-209ENST00000588857 NXPH4O95158 308 aa16.12■□□□□ 0.17
ATG4D-209ENST00000588857 DMRTA1Q5VZB9 504 aa16.12■□□□□ 0.17
ATG4D-209ENST00000588857 C11orf72Q8NBR9 251 aa16.12■□□□□ 0.17
ATG4D-209ENST00000588857 TMEM263Q8WUH6 116 aaKnown RBP16.12■□□□□ 0.17
ATG4D-209ENST00000588857 RCHY1Q96PM5 261 aa16.12■□□□□ 0.17
ATG4D-209ENST00000588857 TMEM191AQ9H0A3 160 aa16.12■□□□□ 0.17
ATG4D-209ENST00000588857 TRGC1P0CF51 173 aa16.11■□□□□ 0.17
ATG4D-209ENST00000588857 SLAQ13239 276 aa16.11■□□□□ 0.17
ATG4D-209ENST00000588857 RRN3P1Q2M238 152 aa16.11■□□□□ 0.17
ATG4D-209ENST00000588857 SPXQ9BT56 116 aa16.11■□□□□ 0.17
ATG4D-209ENST00000588857 PHOX2AO14813 284 aa16.1■□□□□ 0.17
ATG4D-209ENST00000588857 RNASE8Q8TDE3 154 aaKnown RBP16.1■□□□□ 0.17
ATG4D-209ENST00000588857 PRKDCP78527 4128 aaKnown RBP16.1■□□□□ 0.17
ATG4D-209ENST00000588857 DEFB135Q30KP9 77 aa16.09■□□□□ 0.17
ATG4D-209ENST00000588857 ZNF876PQ49A33 203 aa16.09■□□□□ 0.17
ATG4D-209ENST00000588857 C16orf74Q96GX8 76 aa16.09■□□□□ 0.17
ATG4D-209ENST00000588857 NBEAL2Q6ZNJ1 2754 aa16.09■□□□□ 0.17
ATG4D-209ENST00000588857 M0R2P5 195 aa16.09■□□□□ 0.17
ATG4D-209ENST00000588857 EVI2AP22794 236 aa16.09■□□□□ 0.17
ATG4D-209ENST00000588857 KIAA1644Q3SXP7 199 aa16.09■□□□□ 0.17
ATG4D-209ENST00000588857 AP1S3Q96PC3 154 aa16.09■□□□□ 0.17
ATG4D-209ENST00000588857 PRB2P02812 416 aaPredicted RBP16.08■□□□□ 0.16
ATG4D-209ENST00000588857 FAM104BQ5XKR9 115 aa16.08■□□□□ 0.16
ATG4D-209ENST00000588857 SMIM9A6NGZ8 99 aa16.07■□□□□ 0.16
ATG4D-209ENST00000588857 Q6ZWC4 215 aa16.07■□□□□ 0.16
ATG4D-209ENST00000588857 AMN1Q8IY45 258 aa16.07■□□□□ 0.16
ATG4D-209ENST00000588857 DNAH3Q8TD57 4116 aa16.07■□□□□ 0.16
ATG4D-209ENST00000588857 HIST1H2BKO60814 126 aa16.05■□□□□ 0.16
ATG4D-209ENST00000588857 HIST1H2BJP06899 126 aa16.05■□□□□ 0.16
ATG4D-209ENST00000588857 SMIM17P0DL12 118 aa16.05■□□□□ 0.16
ATG4D-209ENST00000588857 HIST1H2BOP23527 126 aa16.05■□□□□ 0.16
ATG4D-209ENST00000588857 HIST1H2BBP33778 126 aa16.05■□□□□ 0.16
ATG4D-209ENST00000588857 HIST1H2BDP58876 126 aa16.05■□□□□ 0.16
ATG4D-209ENST00000588857 HIST1H2BCP62807 126 aa16.05■□□□□ 0.16
ATG4D-209ENST00000588857 HIST2H2BEQ16778 126 aa16.05■□□□□ 0.16
ATG4D-209ENST00000588857 HIST2H2BFQ5QNW6 126 aaPredicted RBP16.05■□□□□ 0.16
ATG4D-209ENST00000588857 C14orf178Q8N769 122 aaPredicted RBP16.05■□□□□ 0.16
ATG4D-209ENST00000588857 HIST1H2BHQ93079 126 aa16.05■□□□□ 0.16
ATG4D-209ENST00000588857 PTH2Q96A98 100 aa16.05■□□□□ 0.16
ATG4D-209ENST00000588857 HIST1H2BNQ99877 126 aa16.05■□□□□ 0.16
ATG4D-209ENST00000588857 HIST1H2BMQ99879 126 aa16.05■□□□□ 0.16
ATG4D-209ENST00000588857 DPH3P1Q9H4G8 78 aa16.05■□□□□ 0.16
ATG4D-209ENST00000588857 IL17DQ8TAD2 202 aa16.04■□□□□ 0.16
ATG4D-209ENST00000588857 PIK3CD-AS1Q5SR53 167 aa16.04■□□□□ 0.16
ATG4D-209ENST00000588857 RNF183Q96D59 192 aa16.04■□□□□ 0.16
ATG4D-209ENST00000588857 X6R8D5 127 aa16.04■□□□□ 0.16
ATG4D-209ENST00000588857 RAB4AP20338 218 aa16.03■□□□□ 0.16
ATG4D-209ENST00000588857 SRIP30626 198 aa16.03■□□□□ 0.16
ATG4D-209ENST00000588857 OR11H2Q8NH07 326 aa16.03■□□□□ 0.16
ATG4D-209ENST00000588857 DAZ2Q13117 558 aaKnown RBP16.02■□□□□ 0.16
ATG4D-209ENST00000588857 MRPL51Q4U2R6 128 aaKnown RBP16.02■□□□□ 0.16
ATG4D-209ENST00000588857 RNF185Q96GF1 192 aa16.02■□□□□ 0.16
ATG4D-209ENST00000588857 JPT2Q9H910 190 aa16.02■□□□□ 0.16
ATG4D-209ENST00000588857 MRPL16Q9NX20 251 aaKnown RBP16.02■□□□□ 0.16
ATG4D-209ENST00000588857 NOP10Q9NPE3 64 aaKnown RBP16.01■□□□□ 0.15
ATG4D-209ENST00000588857 A0A087WWL8 130 aa16■□□□□ 0.15
ATG4D-209ENST00000588857 TRGV1A0A0A0MS02 117 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 160.4 ms