RNA–Protein interactions for RNA: ENST00000588618.5

ACTN4-210, Transcript of actinin alpha 4, humanhuman

TSL 1 (best)

Gene ACTN4, Length 1,729 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-210ENST00000588618 TMEM88Q6PEY1 159 aa16.31■□□□□ 0.2
ACTN4-210ENST00000588618 CBLN2Q8IUK8 224 aa16.31■□□□□ 0.2
ACTN4-210ENST00000588618 IMMP2LQ96T52 175 aa16.31■□□□□ 0.2
ACTN4-210ENST00000588618 F2Z2F3 143 aa16.31■□□□□ 0.2
ACTN4-210ENST00000588618 MED14OSP0DP75 135 aa16.31■□□□□ 0.2
ACTN4-210ENST00000588618 PGLYRP4Q96LB8 373 aa16.31■□□□□ 0.2
ACTN4-210ENST00000588618 OR5AL1P0C617 328 aa16.3■□□□□ 0.2
ACTN4-210ENST00000588618 C11orf72Q8NBR9 251 aa16.3■□□□□ 0.2
ACTN4-210ENST00000588618 CXorf65A6NEN9 183 aa16.29■□□□□ 0.2
ACTN4-210ENST00000588618 FAM3BP58499 235 aaPredicted RBP16.29■□□□□ 0.2
ACTN4-210ENST00000588618 LYZL1Q6UWQ5 148 aa16.29■□□□□ 0.2
ACTN4-210ENST00000588618 SPXQ9BT56 116 aa16.29■□□□□ 0.2
ACTN4-210ENST00000588618 URGCP-MRPS24S4R325 110 aa16.29■□□□□ 0.2
ACTN4-210ENST00000588618 COL7A1Q02388 2944 aa16.28■□□□□ 0.2
ACTN4-210ENST00000588618 IGHV4-28A0A0C4DH34 117 aa16.28■□□□□ 0.2
ACTN4-210ENST00000588618 FOXA3P55318 350 aaPredicted RBP16.28■□□□□ 0.2
ACTN4-210ENST00000588618 SSTP61278 116 aa16.28■□□□□ 0.2
ACTN4-210ENST00000588618 SPANXN1Q5VSR9 72 aa16.28■□□□□ 0.2
ACTN4-210ENST00000588618 NUP35Q8NFH5 326 aa16.28■□□□□ 0.2
ACTN4-210ENST00000588618 C9orf85Q96MD7 179 aa16.28■□□□□ 0.2
ACTN4-210ENST00000588618 SNAI2O43623 268 aa16.28■□□□□ 0.2
ACTN4-210ENST00000588618 SSBP4Q9BWG4 385 aaPredicted RBP16.28■□□□□ 0.2
ACTN4-210ENST00000588618 MUC21A0A0G2JKD1 596 aa16.27■□□□□ 0.19
ACTN4-210ENST00000588618 MUC21A0A140T8X8 626 aa16.27■□□□□ 0.19
ACTN4-210ENST00000588618 CTRLP40313 264 aa16.27■□□□□ 0.19
ACTN4-210ENST00000588618 Q8NAQ8 132 aa16.27■□□□□ 0.19
ACTN4-210ENST00000588618 SYT8Q8NBV8 401 aa16.27■□□□□ 0.19
ACTN4-210ENST00000588618 NOP10Q9NPE3 64 aaKnown RBP16.27■□□□□ 0.19
ACTN4-210ENST00000588618 SMCO4Q9NRQ5 59 aa16.27■□□□□ 0.19
ACTN4-210ENST00000588618 M0R381 172 aa16.26■□□□□ 0.19
ACTN4-210ENST00000588618 ZFP82Q8N141 532 aa16.26■□□□□ 0.19
ACTN4-210ENST00000588618 PLAC8L1A1L4L8 177 aa16.25■□□□□ 0.19
ACTN4-210ENST00000588618 M0R2P5 195 aa16.25■□□□□ 0.19
ACTN4-210ENST00000588618 DEFB4AO15263 64 aa16.25■□□□□ 0.19
ACTN4-210ENST00000588618 SPINK4O60575 86 aa16.25■□□□□ 0.19
ACTN4-210ENST00000588618 CACNG7P62955 275 aa16.25■□□□□ 0.19
ACTN4-210ENST00000588618 OR10AG1Q8NH19 301 aa16.25■□□□□ 0.19
ACTN4-210ENST00000588618 YPEL4Q96NS1 127 aa16.25■□□□□ 0.19
ACTN4-210ENST00000588618 SCRT2Q9NQ03 307 aa16.25■□□□□ 0.19
ACTN4-210ENST00000588618 A0A1B0GUT8 65 aa16.25■□□□□ 0.19
ACTN4-210ENST00000588618 DAZ2Q13117 558 aaKnown RBP16.25■□□□□ 0.19
ACTN4-210ENST00000588618 BTF3L4Q96K17 158 aa16.25■□□□□ 0.19
ACTN4-210ENST00000588618 ZNF876PQ49A33 203 aa16.24■□□□□ 0.19
ACTN4-210ENST00000588618 TRGV1A0A0A0MS02 117 aa16.23■□□□□ 0.19
ACTN4-210ENST00000588618 NHLRC4P0CG21 123 aaPredicted RBP16.23■□□□□ 0.19
ACTN4-210ENST00000588618 ELOBQ15370 118 aa16.23■□□□□ 0.19
ACTN4-210ENST00000588618 TWIST1Q15672 202 aa16.23■□□□□ 0.19
ACTN4-210ENST00000588618 IL17DQ8TAD2 202 aa16.23■□□□□ 0.19
ACTN4-210ENST00000588618 RIGQ13278 110 aa16.22■□□□□ 0.19
ACTN4-210ENST00000588618 TRAV9-1A0A075B6T8 112 aa16.22■□□□□ 0.19
ACTN4-210ENST00000588618 NTF3P20783 257 aa16.22■□□□□ 0.19
ACTN4-210ENST00000588618 LGALS9BQ3B8N2 356 aa16.22■□□□□ 0.19
ACTN4-210ENST00000588618 WDR73Q6P4I2 378 aa16.22■□□□□ 0.19
ACTN4-210ENST00000588618 CNFNQ9BYD5 112 aa16.22■□□□□ 0.19
ACTN4-210ENST00000588618 MRPL16Q9NX20 251 aaKnown RBP16.22■□□□□ 0.19
ACTN4-210ENST00000588618 DMRTA1Q5VZB9 504 aa16.21■□□□□ 0.19
ACTN4-210ENST00000588618 MRPL54Q6P161 138 aaKnown RBP16.21■□□□□ 0.19
ACTN4-210ENST00000588618 ATP5L2Q7Z4Y8 100 aa16.2■□□□□ 0.18
ACTN4-210ENST00000588618 C11orf68Q9H3H3 251 aaKnown RBP16.2■□□□□ 0.18
ACTN4-210ENST00000588618 TGIF2-C20orf24A0A0A6YYL0 155 aa16.19■□□□□ 0.18
ACTN4-210ENST00000588618 LYRM9A8MSI8 78 aa16.19■□□□□ 0.18
ACTN4-210ENST00000588618 FAM222AQ5U5X8 452 aa16.19■□□□□ 0.18
ACTN4-210ENST00000588618 MSRB1Q9NZV6 116 aa16.19■□□□□ 0.18
ACTN4-210ENST00000588618 IGHV4-4A0A075B6R2 117 aa16.19■□□□□ 0.18
ACTN4-210ENST00000588618 TEX48A0A1B0GUV7 120 aa16.19■□□□□ 0.18
ACTN4-210ENST00000588618 SPART-AS1P0CW21 52 aa16.19■□□□□ 0.18
ACTN4-210ENST00000588618 SMIM15Q7Z3B0 74 aa16.19■□□□□ 0.18
ACTN4-210ENST00000588618 RASL10AQ92737 203 aa16.19■□□□□ 0.18
ACTN4-210ENST00000588618 PTH2Q96A98 100 aa16.19■□□□□ 0.18
ACTN4-210ENST00000588618 NACAE9PAV3 2078 aa16.19■□□□□ 0.18
ACTN4-210ENST00000588618 A0A1B0GW15 77 aa16.18■□□□□ 0.18
ACTN4-210ENST00000588618 S100A8P05109 93 aa16.18■□□□□ 0.18
ACTN4-210ENST00000588618 TRGC1P0CF51 173 aa16.18■□□□□ 0.18
ACTN4-210ENST00000588618 CAMPP49913 170 aa16.18■□□□□ 0.18
ACTN4-210ENST00000588618 HBBP68871 147 aa16.18■□□□□ 0.18
ACTN4-210ENST00000588618 Q6ZTI0 123 aa16.18■□□□□ 0.18
ACTN4-210ENST00000588618 NDUFAF3Q9BU61 184 aa16.18■□□□□ 0.18
ACTN4-210ENST00000588618 DKK2Q9UBU2 259 aa16.18■□□□□ 0.18
ACTN4-210ENST00000588618 TRGV2A0A075B6R0 118 aa16.17■□□□□ 0.18
ACTN4-210ENST00000588618 A0A0J9YWU9 116 aa16.17■□□□□ 0.18
ACTN4-210ENST00000588618 GAGE12BA1L429 117 aa16.17■□□□□ 0.18
ACTN4-210ENST00000588618 GAGE7O76087 117 aa16.17■□□□□ 0.18
ACTN4-210ENST00000588618 NXPH4O95158 308 aa16.17■□□□□ 0.18
ACTN4-210ENST00000588618 GAGE12FP0CL80 117 aa16.17■□□□□ 0.18
ACTN4-210ENST00000588618 GAGE12GP0CL81 117 aa16.17■□□□□ 0.18
ACTN4-210ENST00000588618 GAGE12IP0CL82 117 aa16.17■□□□□ 0.18
ACTN4-210ENST00000588618 DEFB130BP0DP73 79 aa16.17■□□□□ 0.18
ACTN4-210ENST00000588618 DEFB130AP0DP74 79 aa16.17■□□□□ 0.18
ACTN4-210ENST00000588618 PIK3CD-AS1Q5SR53 167 aa16.17■□□□□ 0.18
ACTN4-210ENST00000588618 AP1S3Q96PC3 154 aa16.17■□□□□ 0.18
ACTN4-210ENST00000588618 A0A1B0GXF2 115 aa16.16■□□□□ 0.18
ACTN4-210ENST00000588618 SMIM17P0DL12 118 aa16.16■□□□□ 0.18
ACTN4-210ENST00000588618 TRBV24-1A0A075B6N3 115 aa16.15■□□□□ 0.18
ACTN4-210ENST00000588618 A8MWV9 139 aa16.15■□□□□ 0.18
ACTN4-210ENST00000588618 FBN3Q75N90 2809 aa16.15■□□□□ 0.18
ACTN4-210ENST00000588618 RAB4BP61018 213 aa16.14■□□□□ 0.17
ACTN4-210ENST00000588618 DAD1P61803 113 aa16.14■□□□□ 0.17
ACTN4-210ENST00000588618 COLCA2A8K830 154 aa16.14■□□□□ 0.17
ACTN4-210ENST00000588618 RASL11AQ6T310 242 aa16.14■□□□□ 0.17
ACTN4-210ENST00000588618 JPT2Q9H910 190 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 140.3 ms