RNA–Protein interactions for RNA: ENST00000586417.5

ATG4D-204, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 2

Gene ATG4D, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-204ENST00000586417 ASIPP42127 132 aa15.05■□□□□ -0
ATG4D-204ENST00000586417 TDRG1Q3Y452 100 aa15.05■□□□□ -0
ATG4D-204ENST00000586417 C9orf66Q5T8R8 295 aa15.05■□□□□ -0
ATG4D-204ENST00000586417 DMRTA1Q5VZB9 504 aa15.05■□□□□ -0
ATG4D-204ENST00000586417 AMN1Q8IY45 258 aa15.05■□□□□ -0
ATG4D-204ENST00000586417 TMEM191AQ9H0A3 160 aa15.05■□□□□ -0
ATG4D-204ENST00000586417 SCRT2Q9NQ03 307 aa15.05■□□□□ -0
ATG4D-204ENST00000586417 NBEAL1Q6ZS30 2694 aa15.04■□□□□ -0
ATG4D-204ENST00000586417 CRXO43186 299 aaPredicted RBP15.03■□□□□ -0
ATG4D-204ENST00000586417 RNASE3P12724 160 aaKnown RBP15.03■□□□□ -0
ATG4D-204ENST00000586417 OXLD1Q5BKU9 147 aa15.03■□□□□ -0
ATG4D-204ENST00000586417 FAM159AQ6UWV7 190 aa15.03■□□□□ -0
ATG4D-204ENST00000586417 LINC00518Q8N0U6 118 aa15.03■□□□□ -0
ATG4D-204ENST00000586417 MCRIP2Q9BUT9 160 aaKnown RBP15.03■□□□□ -0
ATG4D-204ENST00000586417 NOTCH1P46531 2555 aa15.03■□□□□ -0
ATG4D-204ENST00000586417 INSL3P51460 131 aa15.03■□□□□ -0
ATG4D-204ENST00000586417 CACNG7P62955 275 aa15.03■□□□□ -0
ATG4D-204ENST00000586417 OR10D4PQ8NGN7 298 aa15.03■□□□□ -0
ATG4D-204ENST00000586417 KCNS1Q96KK3 526 aa15.03■□□□□ -0
ATG4D-204ENST00000586417 S100A4P26447 101 aaKnown RBP15.02□□□□□ -0.01
ATG4D-204ENST00000586417 FXYD7P58549 80 aa15.02□□□□□ -0.01
ATG4D-204ENST00000586417 PACRGQ96M98 296 aaPredicted RBP15.02□□□□□ -0.01
ATG4D-204ENST00000586417 CLUHP3Q96NS8 147 aa15.02□□□□□ -0.01
ATG4D-204ENST00000586417 RBMY1A1P0DJD3 496 aaKnown RBP15.01□□□□□ -0.01
ATG4D-204ENST00000586417 RBMY1CP0DJD4 496 aa15.01□□□□□ -0.01
ATG4D-204ENST00000586417 RBMY1FQ15415 496 aaKnown RBP15.01□□□□□ -0.01
ATG4D-204ENST00000586417 MRPL51Q4U2R6 128 aaKnown RBP15.01□□□□□ -0.01
ATG4D-204ENST00000586417 TMEM18Q96B42 140 aa15.01□□□□□ -0.01
ATG4D-204ENST00000586417 RNF185Q96GF1 192 aa15.01□□□□□ -0.01
ATG4D-204ENST00000586417 TIMM8BQ9Y5J9 83 aaPredicted RBP15.01□□□□□ -0.01
ATG4D-204ENST00000586417 U3KQK5 164 aa15.01□□□□□ -0.01
ATG4D-204ENST00000586417 OR11H12B2RN74 326 aa15.01□□□□□ -0.01
ATG4D-204ENST00000586417 BEAN1Q3B7T3 259 aa15.01□□□□□ -0.01
ATG4D-204ENST00000586417 SPANXN1Q5VSR9 72 aa15.01□□□□□ -0.01
ATG4D-204ENST00000586417 SPRY2O43597 315 aa15□□□□□ -0.01
ATG4D-204ENST00000586417 URB1-AS1Q96HZ7 61 aa15□□□□□ -0.01
ATG4D-204ENST00000586417 IGHV1OR15-1A0A075B7D0 117 aa14.99□□□□□ -0.01
ATG4D-204ENST00000586417 D6R8Y8 96 aa14.98□□□□□ -0.01
ATG4D-204ENST00000586417 WIPF1O43516 503 aa14.98□□□□□ -0.01
ATG4D-204ENST00000586417 CD7P09564 240 aa14.98□□□□□ -0.01
ATG4D-204ENST00000586417 RAB4AP20338 218 aa14.98□□□□□ -0.01
ATG4D-204ENST00000586417 NXPH4O95158 308 aa14.98□□□□□ -0.01
ATG4D-204ENST00000586417 SMIM6P0DI80 62 aa14.98□□□□□ -0.01
ATG4D-204ENST00000586417 EVI2AP22794 236 aa14.98□□□□□ -0.01
ATG4D-204ENST00000586417 FAM110AQ9BQ89 295 aa14.98□□□□□ -0.01
ATG4D-204ENST00000586417 C19orf73Q9NVV2 129 aa14.98□□□□□ -0.01
ATG4D-204ENST00000586417 PHLDA3Q9Y5J5 127 aa14.98□□□□□ -0.01
ATG4D-204ENST00000586417 IGHV3-16A0A0C4DH30 117 aa14.97□□□□□ -0.01
ATG4D-204ENST00000586417 CMC4P56277 68 aaPredicted RBP14.97□□□□□ -0.01
ATG4D-204ENST00000586417 TRPT1Q86TN4 253 aaKnown RBP14.97□□□□□ -0.01
ATG4D-204ENST00000586417 Q8N1Y9 231 aa14.97□□□□□ -0.01
ATG4D-204ENST00000586417 MUC4Q99102 2169 aa14.97□□□□□ -0.01
ATG4D-204ENST00000586417 G3V4G9 280 aa14.96□□□□□ -0.01
ATG4D-204ENST00000586417 M0R381 172 aa14.96□□□□□ -0.01
ATG4D-204ENST00000586417 PYY3Q5JQD4 70 aa14.96□□□□□ -0.01
ATG4D-204ENST00000586417 ORMDL3Q8N138 153 aa14.96□□□□□ -0.01
ATG4D-204ENST00000586417 NIT1Q86X76 327 aa14.96□□□□□ -0.02
ATG4D-204ENST00000586417 STHQ8IWL8 128 aa14.96□□□□□ -0.02
ATG4D-204ENST00000586417 C9orf85Q96MD7 179 aa14.96□□□□□ -0.02
ATG4D-204ENST00000586417 C12orf57Q99622 126 aa14.96□□□□□ -0.02
ATG4D-204ENST00000586417 SMKR1H3BMG3 65 aa14.95□□□□□ -0.02
ATG4D-204ENST00000586417 PRELID3AQ96N28 172 aa14.95□□□□□ -0.02
ATG4D-204ENST00000586417 MDFICQ9P1T7 246 aa14.95□□□□□ -0.02
ATG4D-204ENST00000586417 DNAH3Q8TD57 4116 aa14.94□□□□□ -0.02
ATG4D-204ENST00000586417 NCR2O95944 276 aa14.93□□□□□ -0.02
ATG4D-204ENST00000586417 CKS2P33552 79 aa14.93□□□□□ -0.02
ATG4D-204ENST00000586417 KRTAP10-11P60412 298 aa14.93□□□□□ -0.02
ATG4D-204ENST00000586417 RNASEKQ6P5S7 137 aaKnown RBP14.93□□□□□ -0.02
ATG4D-204ENST00000586417 SMIM15Q7Z3B0 74 aa14.93□□□□□ -0.02
ATG4D-204ENST00000586417 SAMD10Q9BYL1 202 aa14.93□□□□□ -0.02
ATG4D-204ENST00000586417 WFDC10AQ9H1F0 79 aa14.93□□□□□ -0.02
ATG4D-204ENST00000586417 GAS8-AS1O95177 125 aa14.93□□□□□ -0.02
ATG4D-204ENST00000586417 NPYP01303 97 aa14.92□□□□□ -0.02
ATG4D-204ENST00000586417 PPBPP02775 128 aa14.92□□□□□ -0.02
ATG4D-204ENST00000586417 PMCHP20382 165 aa14.92□□□□□ -0.02
ATG4D-204ENST00000586417 AMTP48728 403 aa14.92□□□□□ -0.02
ATG4D-204ENST00000586417 SAMD5Q5TGI4 173 aa14.92□□□□□ -0.02
ATG4D-204ENST00000586417 FAM19A2Q8N3H0 131 aa14.92□□□□□ -0.02
ATG4D-204ENST00000586417 TRGV11A0A075B6L2 103 aa14.91□□□□□ -0.02
ATG4D-204ENST00000586417 CHCHD1Q96BP2 118 aaKnown RBP14.91□□□□□ -0.02
ATG4D-204ENST00000586417 C20orf144Q9BQM9 153 aa14.91□□□□□ -0.02
ATG4D-204ENST00000586417 HSBP1O75506 76 aa14.9□□□□□ -0.02
ATG4D-204ENST00000586417 INSP01308 110 aa14.9□□□□□ -0.02
ATG4D-204ENST00000586417 LINC00614P0C842 121 aa14.9□□□□□ -0.02
ATG4D-204ENST00000586417 Q6ZWC4 215 aa14.9□□□□□ -0.02
ATG4D-204ENST00000586417 LINC00467Q9BRT7 94 aa14.9□□□□□ -0.02
ATG4D-204ENST00000586417 EGFEM1PQ0D2K5 195 aa14.9□□□□□ -0.02
ATG4D-204ENST00000586417 AP1S3Q96PC3 154 aa14.9□□□□□ -0.02
ATG4D-204ENST00000586417 CBY3A6NI87 242 aa14.89□□□□□ -0.03
ATG4D-204ENST00000586417 C14orf178Q8N769 122 aaPredicted RBP14.89□□□□□ -0.03
ATG4D-204ENST00000586417 DPH3P1Q9H4G8 78 aa14.89□□□□□ -0.03
ATG4D-204ENST00000586417 XCL2Q9UBD3 114 aa14.89□□□□□ -0.03
ATG4D-204ENST00000586417 KIF25-AS1Q9Y6Z4 181 aa14.89□□□□□ -0.03
ATG4D-204ENST00000586417 GATA1P15976 413 aaPredicted RBP14.88□□□□□ -0.03
ATG4D-204ENST00000586417 JOSD1Q15040 202 aaPredicted RBP14.88□□□□□ -0.03
ATG4D-204ENST00000586417 GTSCR1Q86UQ5 136 aa14.88□□□□□ -0.03
ATG4D-204ENST00000586417 LAMTOR2Q9Y2Q5 125 aa14.88□□□□□ -0.03
ATG4D-204ENST00000586417 CDPF1Q6NVV7 123 aa14.88□□□□□ -0.03
ATG4D-204ENST00000586417 TRAV26-2A0A0B4J265 109 aa14.87□□□□□ -0.03
ATG4D-204ENST00000586417 PRM2P04554 102 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms