RNA–Protein interactions for RNA: ENST00000585685.5

APOC4-APOC2-201, Transcript of APOC4-APOC2 readthrough (NMD candidate), humanhuman

TSL 5

Gene APOC4-APOC2, Length 1,829 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4-APOC2-201ENST00000585685 K7EQG2 157 aa12.34□□□□□ -0.43
APOC4-APOC2-201ENST00000585685 SMIM17P0DL12 118 aa12.34□□□□□ -0.43
APOC4-APOC2-201ENST00000585685 POM121L12Q8N7R1 296 aa12.34□□□□□ -0.43
APOC4-APOC2-201ENST00000585685 C20orf78Q9BR46 151 aa12.34□□□□□ -0.43
APOC4-APOC2-201ENST00000585685 COX11Q9Y6N1 276 aa12.34□□□□□ -0.43
APOC4-APOC2-201ENST00000585685 NPSP0C0P6 89 aa12.34□□□□□ -0.43
APOC4-APOC2-201ENST00000585685 SNRPD3P62318 126 aaKnown RBP12.34□□□□□ -0.43
APOC4-APOC2-201ENST00000585685 FAM159AQ6UWV7 190 aa12.34□□□□□ -0.43
APOC4-APOC2-201ENST00000585685 C14orf178Q8N769 122 aaPredicted RBP12.34□□□□□ -0.43
APOC4-APOC2-201ENST00000585685 RASL10AQ92737 203 aa12.34□□□□□ -0.43
APOC4-APOC2-201ENST00000585685 AP1S3Q96PC3 154 aa12.34□□□□□ -0.43
APOC4-APOC2-201ENST00000585685 DOPEY2Q9Y3R5 2298 aa12.34□□□□□ -0.43
APOC4-APOC2-201ENST00000585685 K7EMI3 77 aa12.33□□□□□ -0.44
APOC4-APOC2-201ENST00000585685 SPRY2O43597 315 aa12.33□□□□□ -0.44
APOC4-APOC2-201ENST00000585685 PRSS1P07477 247 aa12.33□□□□□ -0.44
APOC4-APOC2-201ENST00000585685 SYNJ2BPP57105 145 aa12.33□□□□□ -0.44
APOC4-APOC2-201ENST00000585685 PTPN13Q12923 2485 aa12.33□□□□□ -0.44
APOC4-APOC2-201ENST00000585685 A0A0J9YX75 114 aa12.32□□□□□ -0.44
APOC4-APOC2-201ENST00000585685 C7orf71A4D174 169 aa12.32□□□□□ -0.44
APOC4-APOC2-201ENST00000585685 ZNF688P0C7X2 276 aa12.32□□□□□ -0.44
APOC4-APOC2-201ENST00000585685 HOXD3P31249 432 aaPredicted RBP12.32□□□□□ -0.44
APOC4-APOC2-201ENST00000585685 SUMO2P61956 95 aaKnown RBP12.32□□□□□ -0.44
APOC4-APOC2-201ENST00000585685 Q8N2B8 174 aa12.32□□□□□ -0.44
APOC4-APOC2-201ENST00000585685 ZANQ9Y493 2812 aa12.32□□□□□ -0.44
APOC4-APOC2-201ENST00000585685 SIVA1O15304 175 aa12.32□□□□□ -0.44
APOC4-APOC2-201ENST00000585685 FOXC2Q99958 501 aa12.32□□□□□ -0.44
APOC4-APOC2-201ENST00000585685 PPP1R17O96001 155 aa12.31□□□□□ -0.44
APOC4-APOC2-201ENST00000585685 ORMDL2Q53FV1 153 aa12.31□□□□□ -0.44
APOC4-APOC2-201ENST00000585685 KRTAP1-3Q8IUG1 177 aa12.31□□□□□ -0.44
APOC4-APOC2-201ENST00000585685 Q96MF0 132 aa12.31□□□□□ -0.44
APOC4-APOC2-201ENST00000585685 HHLA3Q9XRX5 114 aa12.31□□□□□ -0.44
APOC4-APOC2-201ENST00000585685 KIF25-AS1Q9Y6Z4 181 aa12.31□□□□□ -0.44
APOC4-APOC2-201ENST00000585685 IGKCP01834 107 aa12.3□□□□□ -0.44
APOC4-APOC2-201ENST00000585685 OR9G4Q8NGQ1 327 aa12.3□□□□□ -0.44
APOC4-APOC2-201ENST00000585685 TRAV12-3A0A0B4J271 114 aa12.3□□□□□ -0.44
APOC4-APOC2-201ENST00000585685 MGPP08493 103 aa12.3□□□□□ -0.44
APOC4-APOC2-201ENST00000585685 Q6ZVH6 145 aa12.3□□□□□ -0.44
APOC4-APOC2-201ENST00000585685 RPL39LQ96EH5 51 aaKnown RBP12.3□□□□□ -0.44
APOC4-APOC2-201ENST00000585685 LINC00315P59091 139 aa12.29□□□□□ -0.44
APOC4-APOC2-201ENST00000585685 AGRNO00468 2067 aa12.29□□□□□ -0.44
APOC4-APOC2-201ENST00000585685 TAX1BP3O14907 124 aa12.28□□□□□ -0.44
APOC4-APOC2-201ENST00000585685 DPM2O94777 84 aa12.28□□□□□ -0.44
APOC4-APOC2-201ENST00000585685 CD7P09564 240 aa12.28□□□□□ -0.44
APOC4-APOC2-201ENST00000585685 ZNF124Q15973 351 aa12.28□□□□□ -0.44
APOC4-APOC2-201ENST00000585685 WFDC12Q8WWY7 111 aa12.28□□□□□ -0.44
APOC4-APOC2-201ENST00000585685 DUSP14O95147 198 aaKnown RBP12.27□□□□□ -0.44
APOC4-APOC2-201ENST00000585685 CDKN1BP46527 198 aa12.27□□□□□ -0.44
APOC4-APOC2-201ENST00000585685 TMEM97Q5BJF2 176 aa12.27□□□□□ -0.44
APOC4-APOC2-201ENST00000585685 TOMM6Q96B49 74 aa12.27□□□□□ -0.44
APOC4-APOC2-201ENST00000585685 C9orf85Q96MD7 179 aa12.27□□□□□ -0.44
APOC4-APOC2-201ENST00000585685 DUX5Q96PT3 197 aa12.27□□□□□ -0.44
APOC4-APOC2-201ENST00000585685 NAV2Q8IVL1 2488 aa12.27□□□□□ -0.45
APOC4-APOC2-201ENST00000585685 A0A087WX48 190 aa12.27□□□□□ -0.45
APOC4-APOC2-201ENST00000585685 TRAV12-1A0A0B4J245 112 aa12.27□□□□□ -0.45
APOC4-APOC2-201ENST00000585685 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.27□□□□□ -0.45
APOC4-APOC2-201ENST00000585685 NMUP48645 174 aa12.27□□□□□ -0.45
APOC4-APOC2-201ENST00000585685 RPL32P62910 135 aaKnown RBP12.27□□□□□ -0.45
APOC4-APOC2-201ENST00000585685 FOXI2Q6ZQN5 318 aa12.27□□□□□ -0.45
APOC4-APOC2-201ENST00000585685 PCP2Q8IVA1 136 aa12.27□□□□□ -0.45
APOC4-APOC2-201ENST00000585685 CREBBPQ92793 2442 aa12.26□□□□□ -0.45
APOC4-APOC2-201ENST00000585685 IGHV3-16A0A0C4DH30 117 aa12.26□□□□□ -0.45
APOC4-APOC2-201ENST00000585685 TCTAP57738 103 aa12.26□□□□□ -0.45
APOC4-APOC2-201ENST00000585685 ADAMTSL5Q6ZMM2 481 aa12.26□□□□□ -0.45
APOC4-APOC2-201ENST00000585685 CENPEQ02224 2701 aa12.25□□□□□ -0.45
APOC4-APOC2-201ENST00000585685 SEC11AP67812 179 aa12.25□□□□□ -0.45
APOC4-APOC2-201ENST00000585685 TCTEX1D4Q5JR98 221 aa12.25□□□□□ -0.45
APOC4-APOC2-201ENST00000585685 MRPL35Q9NZE8 188 aaKnown RBP12.25□□□□□ -0.45
APOC4-APOC2-201ENST00000585685 MXRA5Q9NR99 2828 aa12.25□□□□□ -0.45
APOC4-APOC2-201ENST00000585685 TRAV12-2A0A075B6T6 113 aa12.25□□□□□ -0.45
APOC4-APOC2-201ENST00000585685 HLA-DRB4P13762 266 aa12.25□□□□□ -0.45
APOC4-APOC2-201ENST00000585685 HSD52Q0P140 79 aa12.25□□□□□ -0.45
APOC4-APOC2-201ENST00000585685 UBE2V1Q13404 147 aa12.25□□□□□ -0.45
APOC4-APOC2-201ENST00000585685 HLA-DRB4X5D2U9 266 aa12.25□□□□□ -0.45
APOC4-APOC2-201ENST00000585685 ABCA12Q86UK0 2595 aa12.25□□□□□ -0.45
APOC4-APOC2-201ENST00000585685 IGKV2D-26A0A0A0MRZ7 120 aa12.24□□□□□ -0.45
APOC4-APOC2-201ENST00000585685 IGKV3-20P01619 116 aa12.24□□□□□ -0.45
APOC4-APOC2-201ENST00000585685 SLURP1P55000 103 aa12.24□□□□□ -0.45
APOC4-APOC2-201ENST00000585685 ZC2HC1BQ5TFG8 222 aa12.24□□□□□ -0.45
APOC4-APOC2-201ENST00000585685 AMTNQ6UX39 209 aa12.24□□□□□ -0.45
APOC4-APOC2-201ENST00000585685 C18orf65Q6ZTR6 163 aa12.24□□□□□ -0.45
APOC4-APOC2-201ENST00000585685 TMEM86BQ8N661 226 aa12.24□□□□□ -0.45
APOC4-APOC2-201ENST00000585685 IGHV1OR15-1A0A075B7D0 117 aa12.23□□□□□ -0.45
APOC4-APOC2-201ENST00000585685 LINC01619G3V211 115 aa12.23□□□□□ -0.45
APOC4-APOC2-201ENST00000585685 PLNP26678 52 aa12.23□□□□□ -0.45
APOC4-APOC2-201ENST00000585685 SPINK13Q1W4C9 94 aa12.23□□□□□ -0.45
APOC4-APOC2-201ENST00000585685 C4orf3Q8WVX3 66 aa12.23□□□□□ -0.45
APOC4-APOC2-201ENST00000585685 SCGB3A1Q96QR1 104 aa12.23□□□□□ -0.45
APOC4-APOC2-201ENST00000585685 CSTL1Q9H114 145 aa12.23□□□□□ -0.45
APOC4-APOC2-201ENST00000585685 TMEM160Q9NX00 188 aa12.23□□□□□ -0.45
APOC4-APOC2-201ENST00000585685 HELZ2Q9BYK8 2649 aaKnown RBP12.23□□□□□ -0.45
APOC4-APOC2-201ENST00000585685 ZNF469Q96JG9 3925 aaPredicted RBP12.23□□□□□ -0.45
APOC4-APOC2-201ENST00000585685 TEX15Q9BXT5 2789 aa12.23□□□□□ -0.45
APOC4-APOC2-201ENST00000585685 SUMO4Q6EEV6 95 aa12.23□□□□□ -0.45
APOC4-APOC2-201ENST00000585685 C2orf66Q6UXQ4 117 aa12.23□□□□□ -0.45
APOC4-APOC2-201ENST00000585685 Q8N1Y9 231 aa12.23□□□□□ -0.45
APOC4-APOC2-201ENST00000585685 JPT2Q9H910 190 aa12.23□□□□□ -0.45
APOC4-APOC2-201ENST00000585685 FASNP49327 2511 aaKnown RBP12.22□□□□□ -0.45
APOC4-APOC2-201ENST00000585685 TRAV2A0A0B4J234 112 aa12.22□□□□□ -0.45
APOC4-APOC2-201ENST00000585685 CBY3A6NI87 242 aa12.22□□□□□ -0.45
APOC4-APOC2-201ENST00000585685 F8VRH5 84 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms