RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 PSMB8P28062 276 aa10.17□□□□□ -0.78
RNF43-208ENST00000584437 CTRLP40313 264 aa10.17□□□□□ -0.78
RNF43-208ENST00000584437 PLXNA2O75051 1894 aa10.17□□□□□ -0.78
RNF43-208ENST00000584437 XCL1P47992 114 aa10.17□□□□□ -0.78
RNF43-208ENST00000584437 MED14OSP0DP75 135 aa10.17□□□□□ -0.78
RNF43-208ENST00000584437 DOCK7Q96N67 2140 aa10.17□□□□□ -0.78
RNF43-208ENST00000584437 NOTCH3Q9UM47 2321 aa10.17□□□□□ -0.78
RNF43-208ENST00000584437 IGLV11-55A0A075B6I3 123 aa10.17□□□□□ -0.78
RNF43-208ENST00000584437 C22orf46C9J442 243 aa10.17□□□□□ -0.78
RNF43-208ENST00000584437 PIFOQ8TCI5 191 aa10.17□□□□□ -0.78
RNF43-208ENST00000584437 RNF138Q8WVD3 245 aa10.17□□□□□ -0.78
RNF43-208ENST00000584437 ATP5G1P05496 136 aa10.17□□□□□ -0.78
RNF43-208ENST00000584437 DEFB121Q5J5C9 76 aa10.17□□□□□ -0.78
RNF43-208ENST00000584437 SPATA12Q7Z6I5 190 aa10.17□□□□□ -0.78
RNF43-208ENST00000584437 OPRPNQ99935 248 aaPredicted RBP10.17□□□□□ -0.78
RNF43-208ENST00000584437 CTSZQ9UBR2 303 aa10.17□□□□□ -0.78
RNF43-208ENST00000584437 FAM215AQ9Y5M1 114 aa10.17□□□□□ -0.78
RNF43-208ENST00000584437 JMJD7-PLA2G4BH0Y9G9 81 aa10.16□□□□□ -0.78
RNF43-208ENST00000584437 C11orf86A6NJI1 115 aa10.16□□□□□ -0.78
RNF43-208ENST00000584437 K7ENP7 123 aa10.16□□□□□ -0.78
RNF43-208ENST00000584437 FNDC1Q4ZHG4 1894 aaPredicted RBP10.16□□□□□ -0.78
RNF43-208ENST00000584437 ODF1Q14990 250 aa10.16□□□□□ -0.78
RNF43-208ENST00000584437 BAALCQ8WXS3 180 aa10.16□□□□□ -0.78
RNF43-208ENST00000584437 USF3Q68DE3 2245 aa10.16□□□□□ -0.78
RNF43-208ENST00000584437 HOXB4P17483 251 aaPredicted RBP10.15□□□□□ -0.78
RNF43-208ENST00000584437 KMT2EQ8IZD2 1858 aa10.15□□□□□ -0.78
RNF43-208ENST00000584437 IGKV3D-7A0A0C4DH55 119 aa10.15□□□□□ -0.79
RNF43-208ENST00000584437 DAZ2Q13117 558 aaKnown RBP10.15□□□□□ -0.79
RNF43-208ENST00000584437 DAZ4Q86SG3 579 aaKnown RBP10.15□□□□□ -0.79
RNF43-208ENST00000584437 DAZ3Q9NR90 486 aaKnown RBP10.15□□□□□ -0.79
RNF43-208ENST00000584437 PRR30Q53SZ7 412 aaPredicted RBP10.15□□□□□ -0.79
RNF43-208ENST00000584437 CACNA1HO95180 2353 aa10.14□□□□□ -0.79
RNF43-208ENST00000584437 EML6Q6ZMW3 1958 aa10.14□□□□□ -0.79
RNF43-208ENST00000584437 TTTY13Q9BZ97 58 aa10.14□□□□□ -0.79
RNF43-208ENST00000584437 NOP10Q9NPE3 64 aaKnown RBP10.14□□□□□ -0.79
RNF43-208ENST00000584437 WI2-2373I1.2A0A1W2PRP0 233 aa10.14□□□□□ -0.79
RNF43-208ENST00000584437 BUB3O43684 328 aa10.14□□□□□ -0.79
RNF43-208ENST00000584437 CTSGP08311 255 aa10.14□□□□□ -0.79
RNF43-208ENST00000584437 C16orf54Q6UWD8 224 aa10.14□□□□□ -0.79
RNF43-208ENST00000584437 NCOR1O75376 2440 aa10.14□□□□□ -0.79
RNF43-208ENST00000584437 LGALS9O00182 355 aa10.14□□□□□ -0.79
RNF43-208ENST00000584437 C9orf47Q6ZRZ4 202 aa10.14□□□□□ -0.79
RNF43-208ENST00000584437 C11orf1Q9H5F2 150 aa10.14□□□□□ -0.79
RNF43-208ENST00000584437 CENPVL3A0A0U1RRI6 287 aa10.13□□□□□ -0.79
RNF43-208ENST00000584437 CLPSL2Q6UWE3 100 aa10.13□□□□□ -0.79
RNF43-208ENST00000584437 C5orf38Q86SI9 138 aa10.13□□□□□ -0.79
RNF43-208ENST00000584437 CACNA1BQ00975 2339 aa10.13□□□□□ -0.79
RNF43-208ENST00000584437 RLFQ13129 1914 aa10.13□□□□□ -0.79
RNF43-208ENST00000584437 TRAV26-1A0A087WT03 109 aa10.13□□□□□ -0.79
RNF43-208ENST00000584437 C2orf70A6NJV1 201 aa10.13□□□□□ -0.79
RNF43-208ENST00000584437 COX7B2Q8TF08 81 aa10.13□□□□□ -0.79
RNF43-208ENST00000584437 HELZP42694 1942 aaKnown RBP10.13□□□□□ -0.79
RNF43-208ENST00000584437 IGHV7-81A0A0B4J1V7 117 aa10.12□□□□□ -0.79
RNF43-208ENST00000584437 C19orf71A6NCJ1 209 aa10.12□□□□□ -0.79
RNF43-208ENST00000584437 K7EQD1 137 aa10.12□□□□□ -0.79
RNF43-208ENST00000584437 MP68P56378 58 aa10.12□□□□□ -0.79
RNF43-208ENST00000584437 CHD3Q12873 2000 aaKnown RBP10.12□□□□□ -0.79
RNF43-208ENST00000584437 HIST2H2BCQ6DN03 193 aa10.12□□□□□ -0.79
RNF43-208ENST00000584437 SHANK1Q9Y566 2161 aa10.12□□□□□ -0.79
RNF43-208ENST00000584437 THSD7BQ9C0I4 1608 aa10.11□□□□□ -0.79
RNF43-208ENST00000584437 SPRY2O43597 315 aa10.11□□□□□ -0.79
RNF43-208ENST00000584437 A0A096LPF7 62 aa10.11□□□□□ -0.79
RNF43-208ENST00000584437 C5orf47Q569G3 176 aa10.11□□□□□ -0.79
RNF43-208ENST00000584437 LINC00643Q86TS7 51 aa10.11□□□□□ -0.79
RNF43-208ENST00000584437 VSIG2Q96IQ7 327 aa10.11□□□□□ -0.79
RNF43-208ENST00000584437 NREPQ16612 68 aa10.1□□□□□ -0.79
RNF43-208ENST00000584437 COL6A6A6NMZ7 2263 aa10.1□□□□□ -0.79
RNF43-208ENST00000584437 NLRC5Q86WI3 1866 aa10.1□□□□□ -0.79
RNF43-208ENST00000584437 ETDCA0A1B0GVM5 59 aa10.1□□□□□ -0.79
RNF43-208ENST00000584437 RPL39P62891 51 aaKnown RBP10.1□□□□□ -0.79
RNF43-208ENST00000584437 MALRD1Q5VYJ5 2156 aa10.1□□□□□ -0.79
RNF43-208ENST00000584437 ABCA4P78363 2273 aa10.1□□□□□ -0.79
RNF43-208ENST00000584437 A0A1B0GXF2 115 aa10.1□□□□□ -0.79
RNF43-208ENST00000584437 COX7A2LO14548 114 aa10.1□□□□□ -0.79
RNF43-208ENST00000584437 C16orf74Q96GX8 76 aa10.1□□□□□ -0.79
RNF43-208ENST00000584437 PRSS33Q8NF86 280 aa10.09□□□□□ -0.79
RNF43-208ENST00000584437 VPREB3Q9UKI3 123 aa10.09□□□□□ -0.79
RNF43-208ENST00000584437 IGKV1OR2-108A0A075B7D4 117 aa10.09□□□□□ -0.79
RNF43-208ENST00000584437 NDUFA11Q86Y39 141 aa10.09□□□□□ -0.79
RNF43-208ENST00000584437 DEFB105AQ8NG35 78 aa10.09□□□□□ -0.79
RNF43-208ENST00000584437 CRYGBP07316 175 aa10.09□□□□□ -0.79
RNF43-208ENST00000584437 SP5Q6BEB4 398 aaPredicted RBP10.09□□□□□ -0.79
RNF43-208ENST00000584437 FRMD6-AS1P0C7T7 363 aa10.09□□□□□ -0.79
RNF43-208ENST00000584437 TNRC6AQ8NDV7 1962 aaKnown RBP10.09□□□□□ -0.79
RNF43-208ENST00000584437 PLXND1Q9Y4D7 1925 aa10.09□□□□□ -0.79
RNF43-208ENST00000584437 PKIGQ9Y2B9 76 aa10.09□□□□□ -0.79
RNF43-208ENST00000584437 NDUFS5O43920 106 aa10.08□□□□□ -0.8
RNF43-208ENST00000584437 C3orf56Q8N813 242 aa10.08□□□□□ -0.8
RNF43-208ENST00000584437 IGHV1-58A0A0C4DH39 117 aa10.08□□□□□ -0.8
RNF43-208ENST00000584437 IGLV2-14P01704 120 aa10.08□□□□□ -0.8
RNF43-208ENST00000584437 TMEM61Q8N0U2 210 aa10.08□□□□□ -0.8
RNF43-208ENST00000584437 LECT2O14960 151 aa10.08□□□□□ -0.8
RNF43-208ENST00000584437 PDE6GP18545 87 aa10.08□□□□□ -0.8
RNF43-208ENST00000584437 AJUBAQ96IF1 538 aa10.08□□□□□ -0.8
RNF43-208ENST00000584437 WFDC9Q8NEX5 89 aa10.08□□□□□ -0.8
RNF43-208ENST00000584437 TEX22C9J3V5 150 aa10.07□□□□□ -0.8
RNF43-208ENST00000584437 IGLV2-23P01705 113 aa10.07□□□□□ -0.8
RNF43-208ENST00000584437 CXCL5P42830 114 aa10.07□□□□□ -0.8
RNF43-208ENST00000584437 Q6ZUT4 128 aa10.07□□□□□ -0.8
RNF43-208ENST00000584437 PRAC2D3DTV9 90 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms