RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 PCNX1Q96RV3 2341 aa1.17□□□□□ -2.22
SMCHD1-205ENST00000581383 PTPRQQ9UMZ3 2332 aa1.17□□□□□ -2.22
SMCHD1-205ENST00000581383 SPG11Q96JI7 2443 aa1.17□□□□□ -2.22
SMCHD1-205ENST00000581383 LRRK2Q5S007 2527 aa1.17□□□□□ -2.22
SMCHD1-205ENST00000581383 NAV3Q8IVL0 2385 aa1.16□□□□□ -2.22
SMCHD1-205ENST00000581383 CITO14578 2027 aa1.16□□□□□ -2.22
SMCHD1-205ENST00000581383 ITPR2Q14571 2701 aa1.16□□□□□ -2.22
SMCHD1-205ENST00000581383 ZNF736B4DX44 427 aaPredicted RBP1.16□□□□□ -2.22
SMCHD1-205ENST00000581383 TIMM17BO60830 172 aa1.16□□□□□ -2.22
SMCHD1-205ENST00000581383 PIAS1O75925 651 aa1.16□□□□□ -2.22
SMCHD1-205ENST00000581383 UQCRHP07919 91 aa1.16□□□□□ -2.22
SMCHD1-205ENST00000581383 SERPINB1P30740 379 aa1.16□□□□□ -2.22
SMCHD1-205ENST00000581383 GLRXP35754 106 aa1.16□□□□□ -2.22
SMCHD1-205ENST00000581383 SPINT3P49223 89 aa1.16□□□□□ -2.22
SMCHD1-205ENST00000581383 CCSMST1Q4G0I0 132 aa1.16□□□□□ -2.22
SMCHD1-205ENST00000581383 AKR1C8PQ5T2L2 129 aa1.16□□□□□ -2.22
SMCHD1-205ENST00000581383 Q8IYB0 196 aa1.16□□□□□ -2.22
SMCHD1-205ENST00000581383 COX14Q96I36 57 aa1.16□□□□□ -2.22
SMCHD1-205ENST00000581383 LYSMD1Q96S90 227 aa1.16□□□□□ -2.22
SMCHD1-205ENST00000581383 SELENOSQ9BQE4 189 aa1.16□□□□□ -2.22
SMCHD1-205ENST00000581383 PBDC1Q9BVG4 233 aa1.16□□□□□ -2.22
SMCHD1-205ENST00000581383 SH3BGRL3Q9H299 93 aa1.16□□□□□ -2.22
SMCHD1-205ENST00000581383 CDC42SE1Q9NRR8 79 aa1.16□□□□□ -2.22
SMCHD1-205ENST00000581383 TCHHQ07283 1943 aa1.16□□□□□ -2.22
SMCHD1-205ENST00000581383 POLQO75417 2590 aa1.16□□□□□ -2.22
SMCHD1-205ENST00000581383 SETD2Q9BYW2 2564 aaPredicted RBP1.16□□□□□ -2.22
SMCHD1-205ENST00000581383 ASXL3Q9C0F0 2248 aa1.16□□□□□ -2.22
SMCHD1-205ENST00000581383 AHCTF1Q8WYP5 2266 aa1.15□□□□□ -2.22
SMCHD1-205ENST00000581383 UTP20O75691 2785 aaKnown RBP1.15□□□□□ -2.22
SMCHD1-205ENST00000581383 CSMD2Q7Z408 3487 aa1.15□□□□□ -2.23
SMCHD1-205ENST00000581383 TLN1Q9Y490 2541 aaKnown RBP1.15□□□□□ -2.23
SMCHD1-205ENST00000581383 FLNCQ14315 2725 aa1.15□□□□□ -2.23
SMCHD1-205ENST00000581383 TRGV10A0A0A0MS01 117 aa1.15□□□□□ -2.23
SMCHD1-205ENST00000581383 A0A0G2JMM0 328 aa1.15□□□□□ -2.23
SMCHD1-205ENST00000581383 A0A1W2PPB8 328 aa1.15□□□□□ -2.23
SMCHD1-205ENST00000581383 A0A1W2PRS3 328 aa1.15□□□□□ -2.23
SMCHD1-205ENST00000581383 TLCD2A6NGC4 264 aa1.15□□□□□ -2.23
SMCHD1-205ENST00000581383 KIR3DP1A8MWS1 328 aa1.15□□□□□ -2.23
SMCHD1-205ENST00000581383 E7EQ34 232 aa1.15□□□□□ -2.23
SMCHD1-205ENST00000581383 M0R378 163 aa1.15□□□□□ -2.23
SMCHD1-205ENST00000581383 PGRMC1O00264 195 aaKnown RBP1.15□□□□□ -2.23
SMCHD1-205ENST00000581383 NDUFB3O43676 98 aa1.15□□□□□ -2.23
SMCHD1-205ENST00000581383 CSN2P05814 226 aa1.15□□□□□ -2.23
SMCHD1-205ENST00000581383 TCTAP57738 103 aa1.15□□□□□ -2.23
SMCHD1-205ENST00000581383 BCL2L15Q5TBC7 163 aa1.15□□□□□ -2.23
SMCHD1-205ENST00000581383 C3orf33Q6P1S2 294 aa1.15□□□□□ -2.23
SMCHD1-205ENST00000581383 PDZD9Q8IXQ8 264 aa1.15□□□□□ -2.23
SMCHD1-205ENST00000581383 SKA2Q8WVK7 121 aaPredicted RBP1.15□□□□□ -2.23
SMCHD1-205ENST00000581383 LCN9Q8WX39 176 aa1.15□□□□□ -2.23
SMCHD1-205ENST00000581383 TSLPQ969D9 159 aa1.15□□□□□ -2.23
SMCHD1-205ENST00000581383 SMR3AQ99954 134 aa1.15□□□□□ -2.23
SMCHD1-205ENST00000581383 TMEM126AQ9H061 195 aa1.15□□□□□ -2.23
SMCHD1-205ENST00000581383 PCBD2Q9H0N5 130 aa1.15□□□□□ -2.23
SMCHD1-205ENST00000581383 BIN3Q9NQY0 253 aa1.15□□□□□ -2.23
SMCHD1-205ENST00000581383 ZFC3H1O60293 1989 aaKnown RBP1.15□□□□□ -2.23
SMCHD1-205ENST00000581383 OTOGQ6ZRI0 2925 aa1.15□□□□□ -2.23
SMCHD1-205ENST00000581383 MTORP42345 2549 aa1.15□□□□□ -2.23
SMCHD1-205ENST00000581383 PI4KAP42356 2102 aa1.15□□□□□ -2.23
SMCHD1-205ENST00000581383 URB1O60287 2271 aaKnown RBP1.14□□□□□ -2.23
SMCHD1-205ENST00000581383 DOCK4Q8N1I0 1966 aa1.14□□□□□ -2.23
SMCHD1-205ENST00000581383 CENPEQ02224 2701 aa1.14□□□□□ -2.23
SMCHD1-205ENST00000581383 ABCA2Q9BZC7 2435 aa1.14□□□□□ -2.23
SMCHD1-205ENST00000581383 DUXBA0A1W2PPF3 345 aa1.14□□□□□ -2.23
SMCHD1-205ENST00000581383 RIIAD1A6NNX1 92 aa1.14□□□□□ -2.23
SMCHD1-205ENST00000581383 AIPO00170 330 aa1.14□□□□□ -2.23
SMCHD1-205ENST00000581383 KLF7O75840 302 aaPredicted RBP1.14□□□□□ -2.23
SMCHD1-205ENST00000581383 COX6B1P14854 86 aa1.14□□□□□ -2.23
SMCHD1-205ENST00000581383 KDELR1P24390 212 aa1.14□□□□□ -2.23
SMCHD1-205ENST00000581383 NFYBP25208 207 aa1.14□□□□□ -2.23
SMCHD1-205ENST00000581383 INSL3P51460 131 aa1.14□□□□□ -2.23
SMCHD1-205ENST00000581383 B2MP61769 119 aa1.14□□□□□ -2.23
SMCHD1-205ENST00000581383 UBE2BP63146 152 aa1.14□□□□□ -2.23
SMCHD1-205ENST00000581383 GRINAQ7Z429 371 aa1.14□□□□□ -2.23
SMCHD1-205ENST00000581383 STX19Q8N4C7 294 aa1.14□□□□□ -2.23
SMCHD1-205ENST00000581383 C1orf54Q8WWF1 131 aa1.14□□□□□ -2.23
SMCHD1-205ENST00000581383 LINC00526Q96FQ7 95 aa1.14□□□□□ -2.23
SMCHD1-205ENST00000581383 V9GYQ6 96 aa1.14□□□□□ -2.23
SMCHD1-205ENST00000581383 USP9YO00507 2555 aaPredicted RBP1.14□□□□□ -2.23
SMCHD1-205ENST00000581383 RYR3Q15413 4870 aa1.14□□□□□ -2.23
SMCHD1-205ENST00000581383 NF1P21359 2839 aa1.14□□□□□ -2.23
SMCHD1-205ENST00000581383 KNTC1P50748 2209 aa1.13□□□□□ -2.23
SMCHD1-205ENST00000581383 MED13LQ71F56 2210 aa1.13□□□□□ -2.23
SMCHD1-205ENST00000581383 NOTCH1P46531 2555 aa1.13□□□□□ -2.23
SMCHD1-205ENST00000581383 JMJD1CQ15652 2540 aa1.13□□□□□ -2.23
SMCHD1-205ENST00000581383 CXorf51AA0A1B0GTR3 108 aa1.13□□□□□ -2.23
SMCHD1-205ENST00000581383 LOC285095A0A1B0GVY8 99 aa1.13□□□□□ -2.23
SMCHD1-205ENST00000581383 ODAMA1E959 279 aa1.13□□□□□ -2.23
SMCHD1-205ENST00000581383 H0YGG7 62 aa1.13□□□□□ -2.23
SMCHD1-205ENST00000581383 APOC4-APOC2K7ER74 178 aa1.13□□□□□ -2.23
SMCHD1-205ENST00000581383 M0R2N4 97 aa1.13□□□□□ -2.23
SMCHD1-205ENST00000581383 APOC2P02655 101 aa1.13□□□□□ -2.23
SMCHD1-205ENST00000581383 CRHP06850 196 aa1.13□□□□□ -2.23
SMCHD1-205ENST00000581383 IDO1P14902 403 aa1.13□□□□□ -2.23
SMCHD1-205ENST00000581383 DYNLT3P51808 116 aa1.13□□□□□ -2.23
SMCHD1-205ENST00000581383 DCDP81605 110 aaKnown RBP1.13□□□□□ -2.23
SMCHD1-205ENST00000581383 LTC4SQ16873 150 aa1.13□□□□□ -2.23
SMCHD1-205ENST00000581383 GDF5OSQ5U4N7 250 aa1.13□□□□□ -2.23
SMCHD1-205ENST00000581383 Q6ZS92 163 aa1.13□□□□□ -2.23
SMCHD1-205ENST00000581383 ST6GALNAC3Q8NDV1 305 aa1.13□□□□□ -2.23
SMCHD1-205ENST00000581383 OR2T35Q8NGX2 323 aa1.13□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms