RNA–Protein interactions for RNA: ENST00000580315.1

CDC42EP4-205, Transcript of CDC42 effector protein 4, humanhuman

TSL 2

Gene CDC42EP4, Length 1,022 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-205ENST00000580315 Q9H8V8 135 aa17.18■□□□□ 0.34
CDC42EP4-205ENST00000580315 LTAP01374 205 aa17.17■□□□□ 0.34
CDC42EP4-205ENST00000580315 ORM1P02763 201 aa17.17■□□□□ 0.34
CDC42EP4-205ENST00000580315 FAM162BQ5T6X4 162 aa17.17■□□□□ 0.34
CDC42EP4-205ENST00000580315 TRAV1-1A0A0B4J248 108 aa17.16■□□□□ 0.34
CDC42EP4-205ENST00000580315 IGKV3D-20A0A0C4DH25 116 aa17.16■□□□□ 0.34
CDC42EP4-205ENST00000580315 ASIPP42127 132 aa17.16■□□□□ 0.34
CDC42EP4-205ENST00000580315 PTH2Q96A98 100 aa17.16■□□□□ 0.34
CDC42EP4-205ENST00000580315 MANBALQ9NQG1 85 aa17.16■□□□□ 0.34
CDC42EP4-205ENST00000580315 B4DEV8 164 aa17.15■□□□□ 0.34
CDC42EP4-205ENST00000580315 SULT1A2P50226 295 aa17.15■□□□□ 0.34
CDC42EP4-205ENST00000580315 NACAE9PAV3 2078 aa17.15■□□□□ 0.34
CDC42EP4-205ENST00000580315 SCO2A0A1W2PP80 73 aa17.14■□□□□ 0.33
CDC42EP4-205ENST00000580315 CIDEAO60543 219 aa17.14■□□□□ 0.33
CDC42EP4-205ENST00000580315 SH2D1AO60880 128 aa17.14■□□□□ 0.33
CDC42EP4-205ENST00000580315 RNASE3P12724 160 aaKnown RBP17.14■□□□□ 0.33
CDC42EP4-205ENST00000580315 GNG13Q9P2W3 67 aa17.14■□□□□ 0.33
CDC42EP4-205ENST00000580315 SRIP30626 198 aa17.13■□□□□ 0.33
CDC42EP4-205ENST00000580315 CRIP1P50238 77 aa17.13■□□□□ 0.33
CDC42EP4-205ENST00000580315 TTC32Q5I0X7 151 aa17.13■□□□□ 0.33
CDC42EP4-205ENST00000580315 NEGR1Q7Z3B1 354 aa17.13■□□□□ 0.33
CDC42EP4-205ENST00000580315 RS1O15537 224 aa17.12■□□□□ 0.33
CDC42EP4-205ENST00000580315 GYPEP15421 78 aa17.12■□□□□ 0.33
CDC42EP4-205ENST00000580315 ZNF674Q2M3X9 581 aa17.12■□□□□ 0.33
CDC42EP4-205ENST00000580315 ZNF506Q5JVG8 444 aa17.12■□□□□ 0.33
CDC42EP4-205ENST00000580315 HSPG2P98160 4391 aa17.12■□□□□ 0.33
CDC42EP4-205ENST00000580315 PGPEP1LA6NFU8 196 aa17.11■□□□□ 0.33
CDC42EP4-205ENST00000580315 KRBOX1C9JBD0 128 aa17.11■□□□□ 0.33
CDC42EP4-205ENST00000580315 K7EQD1 137 aa17.11■□□□□ 0.33
CDC42EP4-205ENST00000580315 M0R036 132 aa17.11■□□□□ 0.33
CDC42EP4-205ENST00000580315 CCL20P78556 96 aa17.11■□□□□ 0.33
CDC42EP4-205ENST00000580315 CFAP126Q5VTH2 177 aa17.11■□□□□ 0.33
CDC42EP4-205ENST00000580315 TXNDC17Q9BRA2 123 aa17.11■□□□□ 0.33
CDC42EP4-205ENST00000580315 IL36BQ9NZH7 164 aa17.11■□□□□ 0.33
CDC42EP4-205ENST00000580315 GATA1P15976 413 aaPredicted RBP17.1■□□□□ 0.33
CDC42EP4-205ENST00000580315 BAGE2Q86Y30 109 aa17.1■□□□□ 0.33
CDC42EP4-205ENST00000580315 C9orf62Q8N4C0 152 aa17.1■□□□□ 0.33
CDC42EP4-205ENST00000580315 IFNA1P01562 189 aa17.09■□□□□ 0.33
CDC42EP4-205ENST00000580315 PIK3CD-AS1Q5SR53 167 aa17.09■□□□□ 0.33
CDC42EP4-205ENST00000580315 DNLZQ5SXM8 178 aa17.09■□□□□ 0.33
CDC42EP4-205ENST00000580315 LYPD5Q6UWN5 251 aa17.09■□□□□ 0.33
CDC42EP4-205ENST00000580315 C6orf223Q8N319 242 aa17.09■□□□□ 0.33
CDC42EP4-205ENST00000580315 NHLRC2Q8NBF2 726 aa17.09■□□□□ 0.33
CDC42EP4-205ENST00000580315 A0A1W2PPQ1 181 aa17.08■□□□□ 0.32
CDC42EP4-205ENST00000580315 H3BVH4 76 aa17.08■□□□□ 0.32
CDC42EP4-205ENST00000580315 TNP2Q05952 138 aa17.08■□□□□ 0.32
CDC42EP4-205ENST00000580315 LINC01559Q495D7 138 aa17.08■□□□□ 0.32
CDC42EP4-205ENST00000580315 SH2D6Q7Z4S9 175 aa17.08■□□□□ 0.32
CDC42EP4-205ENST00000580315 GRIFINA4D1Z8 144 aa17.07■□□□□ 0.32
CDC42EP4-205ENST00000580315 A8MWV9 139 aa17.07■□□□□ 0.32
CDC42EP4-205ENST00000580315 NXPH4O95158 308 aa17.07■□□□□ 0.32
CDC42EP4-205ENST00000580315 SYT8Q8NBV8 401 aa17.07■□□□□ 0.32
CDC42EP4-205ENST00000580315 IGHV3-73A0A0B4J1V6 119 aa17.06■□□□□ 0.32
CDC42EP4-205ENST00000580315 SIVA1O15304 175 aa17.06■□□□□ 0.32
CDC42EP4-205ENST00000580315 ARMS2P0C7Q2 107 aa17.06■□□□□ 0.32
CDC42EP4-205ENST00000580315 PRADC1Q9BSG0 188 aa17.06■□□□□ 0.32
CDC42EP4-205ENST00000580315 TMSB15BA0A087X1C1 80 aa17.05■□□□□ 0.32
CDC42EP4-205ENST00000580315 TRBV6-4A0A1B0GX49 114 aa17.05■□□□□ 0.32
CDC42EP4-205ENST00000580315 C16orf90A8MZG2 172 aa17.05■□□□□ 0.32
CDC42EP4-205ENST00000580315 RPL35P42766 123 aaKnown RBP17.05■□□□□ 0.32
CDC42EP4-205ENST00000580315 RHOHQ15669 191 aa17.05■□□□□ 0.32
CDC42EP4-205ENST00000580315 C11orf52Q96A22 123 aa17.05■□□□□ 0.32
CDC42EP4-205ENST00000580315 MLST8Q9BVC4 326 aa17.05■□□□□ 0.32
CDC42EP4-205ENST00000580315 MGST1P10620 155 aaKnown RBP17.04■□□□□ 0.32
CDC42EP4-205ENST00000580315 ZFP2Q6ZN57 461 aa17.04■□□□□ 0.32
CDC42EP4-205ENST00000580315 SLC25A29Q8N8R3 303 aa17.04■□□□□ 0.32
CDC42EP4-205ENST00000580315 PHLDA3Q9Y5J5 127 aa17.04■□□□□ 0.32
CDC42EP4-205ENST00000580315 LRP1BQ9NZR2 4599 aa17.03■□□□□ 0.32
CDC42EP4-205ENST00000580315 LOC100131303A0A0U1RQF7 123 aa17.03■□□□□ 0.32
CDC42EP4-205ENST00000580315 PDE6DO43924 150 aa17.03■□□□□ 0.32
CDC42EP4-205ENST00000580315 CDK2AP2O75956 126 aa17.03■□□□□ 0.32
CDC42EP4-205ENST00000580315 MEF2BQ02080 365 aaPredicted RBP17.03■□□□□ 0.32
CDC42EP4-205ENST00000580315 PARLQ9H300 379 aa17.03■□□□□ 0.32
CDC42EP4-205ENST00000580315 BCL2P10415 239 aa17.01■□□□□ 0.31
CDC42EP4-205ENST00000580315 BTF3P20290 206 aaKnown RBP17.01■□□□□ 0.31
CDC42EP4-205ENST00000580315 TAGLN2P37802 199 aaKnown RBP17.01■□□□□ 0.31
CDC42EP4-205ENST00000580315 PRR27Q6MZM9 219 aa17.01■□□□□ 0.31
CDC42EP4-205ENST00000580315 DERL1Q9BUN8 251 aa17.01■□□□□ 0.31
CDC42EP4-205ENST00000580315 KRTAP1-5Q9BYS1 174 aa17.01■□□□□ 0.31
CDC42EP4-205ENST00000580315 DMRTA1Q5VZB9 504 aa17■□□□□ 0.31
CDC42EP4-205ENST00000580315 SCRT2Q9NQ03 307 aa17■□□□□ 0.31
CDC42EP4-205ENST00000580315 ZFP82Q8N141 532 aa16.99■□□□□ 0.31
CDC42EP4-205ENST00000580315 VAX2Q9UIW0 290 aa16.99■□□□□ 0.31
CDC42EP4-205ENST00000580315 A0A1B0GVG6 124 aa16.98■□□□□ 0.31
CDC42EP4-205ENST00000580315 M0R381 172 aa16.98■□□□□ 0.31
CDC42EP4-205ENST00000580315 RHODO00212 210 aa16.98■□□□□ 0.31
CDC42EP4-205ENST00000580315 CXCL1P09341 107 aa16.98■□□□□ 0.31
CDC42EP4-205ENST00000580315 TIRAPP58753 221 aa16.98■□□□□ 0.31
CDC42EP4-205ENST00000580315 BLOC1S1P78537 153 aa16.98■□□□□ 0.31
CDC42EP4-205ENST00000580315 CENPWQ5EE01 88 aa16.98■□□□□ 0.31
CDC42EP4-205ENST00000580315 ALKAL2Q6UX46 152 aa16.98■□□□□ 0.31
CDC42EP4-205ENST00000580315 MAPKAPK5-AS1Q8N8E1 139 aa16.98■□□□□ 0.31
CDC42EP4-205ENST00000580315 MED9Q9NWA0 146 aa16.98■□□□□ 0.31
CDC42EP4-205ENST00000580315 TRAV9-2A0A087WT02 112 aa16.97■□□□□ 0.31
CDC42EP4-205ENST00000580315 GNG4P50150 75 aa16.97■□□□□ 0.31
CDC42EP4-205ENST00000580315 RPL19P84098 196 aaKnown RBP16.97■□□□□ 0.31
CDC42EP4-205ENST00000580315 JPT2Q9H910 190 aa16.97■□□□□ 0.31
CDC42EP4-205ENST00000580315 LY96Q9Y6Y9 160 aa16.97■□□□□ 0.31
CDC42EP4-205ENST00000580315 SMIM12Q96EX1 92 aa16.96■□□□□ 0.31
CDC42EP4-205ENST00000580315 SFRP2Q96HF1 295 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms