RNA–Protein interactions for RNA: ENST00000579780.5

CDK5RAP3-215, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 3

Gene CDK5RAP3, Length 611 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-215	ENST00000579780	TPPP3	Q9BW30	176 aa		12.06	□□□□□ -0.48
CDK5RAP3-215	ENST00000579780	MDFIC	Q9P1T7	246 aa		12.06	□□□□□ -0.48
CDK5RAP3-215	ENST00000579780	URGCP-MRPS24	S4R325	110 aa		12.06	□□□□□ -0.48
CDK5RAP3-215	ENST00000579780	PRM2	P04554	102 aa		12.05	□□□□□ -0.48
CDK5RAP3-215	ENST00000579780	AZU1	P20160	251 aa		12.05	□□□□□ -0.48
CDK5RAP3-215	ENST00000579780	FAM3B	P58499	235 aa	Predicted RBP	12.05	□□□□□ -0.48
CDK5RAP3-215	ENST00000579780	CACNG7	P62955	275 aa		12.05	□□□□□ -0.48
CDK5RAP3-215	ENST00000579780	ELOB	Q15370	118 aa		12.05	□□□□□ -0.48
CDK5RAP3-215	ENST00000579780	WDR73	Q6P4I2	378 aa		12.05	□□□□□ -0.48
CDK5RAP3-215	ENST00000579780	YPEL4	Q96NS1	127 aa		12.05	□□□□□ -0.48
CDK5RAP3-215	ENST00000579780	SPATA25	Q9BR10	227 aa		12.05	□□□□□ -0.48
CDK5RAP3-215	ENST00000579780	TM2D3	Q9BRN9	247 aa		12.05	□□□□□ -0.48
CDK5RAP3-215	ENST00000579780	OVOL2	Q9BRP0	275 aa		12.05	□□□□□ -0.48
CDK5RAP3-215	ENST00000579780	SPX	Q9BT56	116 aa		12.05	□□□□□ -0.48
CDK5RAP3-215	ENST00000579780	PHLDA3	Q9Y5J5	127 aa		12.05	□□□□□ -0.48
CDK5RAP3-215	ENST00000579780	TRBV24-1	A0A075B6N3	115 aa		12.04	□□□□□ -0.48
CDK5RAP3-215	ENST00000579780	IGHV4-4	A0A075B6R2	117 aa		12.04	□□□□□ -0.48
CDK5RAP3-215	ENST00000579780		A0A1B0GUT8	65 aa		12.04	□□□□□ -0.48
CDK5RAP3-215	ENST00000579780	PLAC8L1	A1L4L8	177 aa		12.04	□□□□□ -0.48
CDK5RAP3-215	ENST00000579780	SNURFL	B1AK76	121 aa		12.04	□□□□□ -0.48
CDK5RAP3-215	ENST00000579780	SBSPON	Q8IVN8	264 aa		12.04	□□□□□ -0.48
CDK5RAP3-215	ENST00000579780	ZFP82	Q8N141	532 aa		12.04	□□□□□ -0.48
CDK5RAP3-215	ENST00000579780		Q8NAQ8	132 aa		12.04	□□□□□ -0.48
CDK5RAP3-215	ENST00000579780	OR10AG1	Q8NH19	301 aa		12.04	□□□□□ -0.48
CDK5RAP3-215	ENST00000579780	PTH2	Q96A98	100 aa		12.04	□□□□□ -0.48
CDK5RAP3-215	ENST00000579780	GSN-AS1	Q9NRJ2	163 aa		12.04	□□□□□ -0.48
CDK5RAP3-215	ENST00000579780	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	12.04	□□□□□ -0.48
CDK5RAP3-215	ENST00000579780	PIK3CD-AS1	Q5SR53	167 aa		12.03	□□□□□ -0.48
CDK5RAP3-215	ENST00000579780	B9D2	Q9BPU9	175 aa		12.03	□□□□□ -0.48
CDK5RAP3-215	ENST00000579780	NDUFAF3	Q9BU61	184 aa		12.03	□□□□□ -0.48
CDK5RAP3-215	ENST00000579780	RETN	Q9HD89	108 aa		12.03	□□□□□ -0.48
CDK5RAP3-215	ENST00000579780	IGHV4-28	A0A0C4DH34	117 aa		12.02	□□□□□ -0.49
CDK5RAP3-215	ENST00000579780		A0A1B0GW15	77 aa		12.02	□□□□□ -0.49
CDK5RAP3-215	ENST00000579780		A0A1B0GXF2	115 aa		12.02	□□□□□ -0.49
CDK5RAP3-215	ENST00000579780		M0R2P5	195 aa		12.02	□□□□□ -0.49
CDK5RAP3-215	ENST00000579780	DAZ2	Q13117	558 aa	Known RBP	12.02	□□□□□ -0.49
CDK5RAP3-215	ENST00000579780	RIG	Q13278	110 aa		12.02	□□□□□ -0.49
CDK5RAP3-215	ENST00000579780	SPANXN1	Q5VSR9	72 aa		12.02	□□□□□ -0.49
CDK5RAP3-215	ENST00000579780	RASL11A	Q6T310	242 aa		12.02	□□□□□ -0.49
CDK5RAP3-215	ENST00000579780	SYT8	Q8NBV8	401 aa		12.02	□□□□□ -0.49
CDK5RAP3-215	ENST00000579780	MUC4	Q99102	2169 aa		12.02	□□□□□ -0.49
CDK5RAP3-215	ENST00000579780	S100A8	P05109	93 aa		12.01	□□□□□ -0.49
CDK5RAP3-215	ENST00000579780	HBB	P68871	147 aa		12.01	□□□□□ -0.49
CDK5RAP3-215	ENST00000579780	MRPL54	Q6P161	138 aa	Known RBP	12.01	□□□□□ -0.49
CDK5RAP3-215	ENST00000579780	C11orf68	Q9H3H3	251 aa	Known RBP	12.01	□□□□□ -0.49
CDK5RAP3-215	ENST00000579780	DNAH9	Q9NYC9	4486 aa		12.01	□□□□□ -0.49
CDK5RAP3-215	ENST00000579780	SPINK4	O60575	86 aa		12	□□□□□ -0.49
CDK5RAP3-215	ENST00000579780	DEFA6	Q01524	100 aa		12	□□□□□ -0.49
CDK5RAP3-215	ENST00000579780	LGALS9B	Q3B8N2	356 aa		12	□□□□□ -0.49
CDK5RAP3-215	ENST00000579780	GATD1	Q8NB37	220 aa		12	□□□□□ -0.49
CDK5RAP3-215	ENST00000579780	HUWE1	Q7Z6Z7	4374 aa	Known RBP	12	□□□□□ -0.49
CDK5RAP3-215	ENST00000579780	TGIF2-C20orf24	A0A0A6YYL0	155 aa		11.99	□□□□□ -0.49
CDK5RAP3-215	ENST00000579780	MUC21	A0A0G2JKD1	596 aa		11.99	□□□□□ -0.49
CDK5RAP3-215	ENST00000579780	MUC21	A0A140T8X8	626 aa		11.99	□□□□□ -0.49
CDK5RAP3-215	ENST00000579780		M0R381	172 aa		11.99	□□□□□ -0.49
CDK5RAP3-215	ENST00000579780	TRGC1	P0CF51	173 aa		11.99	□□□□□ -0.49
CDK5RAP3-215	ENST00000579780	COX19	Q49B96	90 aa		11.99	□□□□□ -0.49
CDK5RAP3-215	ENST00000579780	AP1S3	Q96PC3	154 aa		11.99	□□□□□ -0.49
CDK5RAP3-215	ENST00000579780	NTF3	P20783	257 aa		11.98	□□□□□ -0.49
CDK5RAP3-215	ENST00000579780	TWIST1	Q15672	202 aa		11.98	□□□□□ -0.49
CDK5RAP3-215	ENST00000579780	ZNF876P	Q49A33	203 aa		11.98	□□□□□ -0.49
CDK5RAP3-215	ENST00000579780	RASL10A	Q92737	203 aa		11.98	□□□□□ -0.49
CDK5RAP3-215	ENST00000579780	FAM210B	Q96KR6	192 aa		11.98	□□□□□ -0.49
CDK5RAP3-215	ENST00000579780	ZMAT4	Q9H898	229 aa		11.98	□□□□□ -0.49
CDK5RAP3-215	ENST00000579780	NOP10	Q9NPE3	64 aa	Known RBP	11.98	□□□□□ -0.49
CDK5RAP3-215	ENST00000579780	TEX48	A0A1B0GUV7	120 aa		11.97	□□□□□ -0.49
CDK5RAP3-215	ENST00000579780	LYRM9	A8MSI8	78 aa		11.97	□□□□□ -0.49
CDK5RAP3-215	ENST00000579780	DMRTA1	Q5VZB9	504 aa		11.97	□□□□□ -0.49
CDK5RAP3-215	ENST00000579780	LINC00612	Q8N6U2	182 aa		11.97	□□□□□ -0.49
CDK5RAP3-215	ENST00000579780	MRPL16	Q9NX20	251 aa	Known RBP	11.97	□□□□□ -0.49
CDK5RAP3-215	ENST00000579780	MEGF8	Q7Z7M0	2845 aa		11.96	□□□□□ -0.49
CDK5RAP3-215	ENST00000579780	NBEAL2	Q6ZNJ1	2754 aa		11.96	□□□□□ -0.49
CDK5RAP3-215	ENST00000579780	TRGV1	A0A0A0MS02	117 aa		11.96	□□□□□ -0.49
CDK5RAP3-215	ENST00000579780	COLCA2	A8K830	154 aa		11.96	□□□□□ -0.49
CDK5RAP3-215	ENST00000579780	MSRB1	Q9NZV6	116 aa		11.96	□□□□□ -0.49
CDK5RAP3-215	ENST00000579780	PRKDC	P78527	4128 aa	Known RBP	11.95	□□□□□ -0.5
CDK5RAP3-215	ENST00000579780		A8MWV9	139 aa		11.95	□□□□□ -0.5
CDK5RAP3-215	ENST00000579780	HLA-DQA1	P01909	254 aa		11.95	□□□□□ -0.5
CDK5RAP3-215	ENST00000579780	MT-ND6	P03923	174 aa		11.95	□□□□□ -0.5
CDK5RAP3-215	ENST00000579780	CAMP	P49913	170 aa		11.95	□□□□□ -0.5
CDK5RAP3-215	ENST00000579780	EMP1	P54849	157 aa		11.95	□□□□□ -0.5
CDK5RAP3-215	ENST00000579780		Q6ZTI0	123 aa		11.95	□□□□□ -0.5
CDK5RAP3-215	ENST00000579780	SMIM15	Q7Z3B0	74 aa		11.95	□□□□□ -0.5
CDK5RAP3-215	ENST00000579780	C18orf15	Q96N68	181 aa		11.95	□□□□□ -0.5
CDK5RAP3-215	ENST00000579780	TMEM191A	Q9H0A3	160 aa		11.95	□□□□□ -0.5
CDK5RAP3-215	ENST00000579780	DKK2	Q9UBU2	259 aa		11.95	□□□□□ -0.5
CDK5RAP3-215	ENST00000579780	SST	P61278	116 aa		11.94	□□□□□ -0.5
CDK5RAP3-215	ENST00000579780	GNB1L	Q9BYB4	327 aa		11.94	□□□□□ -0.5
CDK5RAP3-215	ENST00000579780	DEFB4A	O15263	64 aa		11.93	□□□□□ -0.5
CDK5RAP3-215	ENST00000579780	NHLRC4	P0CG21	123 aa	Predicted RBP	11.93	□□□□□ -0.5
CDK5RAP3-215	ENST00000579780	FAM222A	Q5U5X8	452 aa		11.93	□□□□□ -0.5
CDK5RAP3-215	ENST00000579780	TMEM136	Q6ZRR5	245 aa		11.93	□□□□□ -0.5
CDK5RAP3-215	ENST00000579780	DPH3P1	Q9H4G8	78 aa		11.93	□□□□□ -0.5
CDK5RAP3-215	ENST00000579780	NACA	E9PAV3	2078 aa		11.92	□□□□□ -0.5
CDK5RAP3-215	ENST00000579780	TRAV4	A0A0B4J268	109 aa		11.92	□□□□□ -0.5
CDK5RAP3-215	ENST00000579780	RHOD	O00212	210 aa		11.92	□□□□□ -0.5
CDK5RAP3-215	ENST00000579780	RS1	O15537	224 aa		11.92	□□□□□ -0.5
CDK5RAP3-215	ENST00000579780	RAB5A	P20339	215 aa		11.92	□□□□□ -0.5
CDK5RAP3-215	ENST00000579780	EVI2A	P22794	236 aa		11.92	□□□□□ -0.5
CDK5RAP3-215	ENST00000579780	RAB4B	P61018	213 aa		11.92	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms