RNA–Protein interactions for RNA: ENST00000574437.5

ABR-228, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 5 BASIC

Gene ABR, Length 3,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-228ENST00000574437 HLA-DRB4P13762 266 aa11.3□□□□□ -0.6
ABR-228ENST00000574437 ARL3P36405 182 aa11.3□□□□□ -0.6
ABR-228ENST00000574437 ANXA2RQ3ZCQ2 193 aa11.3□□□□□ -0.6
ABR-228ENST00000574437 GAGE13Q4V321 117 aa11.3□□□□□ -0.6
ABR-228ENST00000574437 HLA-DRB4X5D2U9 266 aa11.3□□□□□ -0.6
ABR-228ENST00000574437 F8W1H4 67 aa11.3□□□□□ -0.6
ABR-228ENST00000574437 ASIPP42127 132 aa11.3□□□□□ -0.6
ABR-228ENST00000574437 SRSF9Q13242 221 aaKnown RBP eCLIP11.3□□□□□ -0.6
ABR-228ENST00000574437 TAL2Q16559 108 aa11.3□□□□□ -0.6
ABR-228ENST00000574437 UNQ9165/PRO28630Q6UXU0 137 aa11.3□□□□□ -0.6
ABR-228ENST00000574437 SPANXB1Q9NS25 103 aaPredicted RBP11.3□□□□□ -0.6
ABR-228ENST00000574437 DOPEY1Q5JWR5 2465 aa11.3□□□□□ -0.6
ABR-228ENST00000574437 GNRH2O43555 120 aa11.3□□□□□ -0.6
ABR-228ENST00000574437 TRBV12-3P01733 135 aa11.3□□□□□ -0.6
ABR-228ENST00000574437 SIGMAR1Q99720 223 aa11.3□□□□□ -0.6
ABR-228ENST00000574437 PRADC1Q9BSG0 188 aa11.3□□□□□ -0.6
ABR-228ENST00000574437 ZNF815PA8K554 130 aa11.29□□□□□ -0.6
ABR-228ENST00000574437 RRN3P1Q2M238 152 aa11.29□□□□□ -0.6
ABR-228ENST00000574437 ITLN2Q8WWU7 325 aaPredicted RBP11.29□□□□□ -0.6
ABR-228ENST00000574437 WFDC12Q8WWY7 111 aa11.29□□□□□ -0.6
ABR-228ENST00000574437 MRPL53Q96EL3 112 aaKnown RBP11.29□□□□□ -0.6
ABR-228ENST00000574437 DPH3P1Q9H4G8 78 aa11.29□□□□□ -0.6
ABR-228ENST00000574437 TRAV41A0A0B4J266 112 aa11.29□□□□□ -0.6
ABR-228ENST00000574437 TRAV21A0A0B4J279 112 aa11.29□□□□□ -0.6
ABR-228ENST00000574437 CD300EQ496F6 205 aaPredicted RBP11.29□□□□□ -0.6
ABR-228ENST00000574437 C9orf139Q6ZV77 190 aa11.29□□□□□ -0.6
ABR-228ENST00000574437 BPESC1Q9GZL8 116 aa11.29□□□□□ -0.6
ABR-228ENST00000574437 MRPL16Q9NX20 251 aaKnown RBP11.29□□□□□ -0.6
ABR-228ENST00000574437 A0A1B0GWB2 263 aa11.28□□□□□ -0.6
ABR-228ENST00000574437 GAGE12HA6NDE8 117 aa11.28□□□□□ -0.6
ABR-228ENST00000574437 HOXA3O43365 443 aaPredicted RBP11.28□□□□□ -0.6
ABR-228ENST00000574437 SRD5A1P18405 259 aa11.28□□□□□ -0.6
ABR-228ENST00000574437 AJUBAQ96IF1 538 aa11.28□□□□□ -0.6
ABR-228ENST00000574437 PGPEP1Q9NXJ5 209 aa11.28□□□□□ -0.6
ABR-228ENST00000574437 TRBV7-3A0A075B6L6 115 aa11.28□□□□□ -0.6
ABR-228ENST00000574437 IGHV4-4A0A075B6R2 117 aa11.28□□□□□ -0.6
ABR-228ENST00000574437 PRSS29PA6NIE9 313 aa11.28□□□□□ -0.6
ABR-228ENST00000574437 PRSS47A8MTI9 375 aa11.28□□□□□ -0.6
ABR-228ENST00000574437 NPFFO15130 113 aa11.28□□□□□ -0.6
ABR-228ENST00000574437 TOMM6Q96B49 74 aa11.28□□□□□ -0.6
ABR-228ENST00000574437 LOC107984156A0A0G2JMH3 177 aa11.28□□□□□ -0.6
ABR-228ENST00000574437 LGALS1P09382 135 aaKnown RBP11.28□□□□□ -0.6
ABR-228ENST00000574437 SLC25A16P16260 332 aa11.28□□□□□ -0.6
ABR-228ENST00000574437 ARL17AQ8IVW1 177 aa11.28□□□□□ -0.6
ABR-228ENST00000574437 ZFAND2AQ8N6M9 145 aa11.28□□□□□ -0.6
ABR-228ENST00000574437 KLHL30-AS1Q8NEE0 82 aa11.28□□□□□ -0.6
ABR-228ENST00000574437 BAALCQ8WXS3 180 aa11.28□□□□□ -0.6
ABR-228ENST00000574437 SPAG8Q99932 426 aaPredicted RBP11.28□□□□□ -0.6
ABR-228ENST00000574437 TRAV12-1A0A0B4J245 112 aa11.27□□□□□ -0.6
ABR-228ENST00000574437 BRD3OSQ6XYD6 125 aa11.27□□□□□ -0.6
ABR-228ENST00000574437 C5orf56Q8N8D9 126 aa11.27□□□□□ -0.6
ABR-228ENST00000574437 NEXN-AS1Q8NBZ9 246 aa11.27□□□□□ -0.6
ABR-228ENST00000574437 SPOCK3Q9BQ16 436 aa11.27□□□□□ -0.6
ABR-228ENST00000574437 APOMO95445 188 aa11.27□□□□□ -0.61
ABR-228ENST00000574437 INSL3P51460 131 aa11.27□□□□□ -0.61
ABR-228ENST00000574437 LINC00477Q96M19 166 aa11.27□□□□□ -0.61
ABR-228ENST00000574437 USP9YO00507 2555 aaPredicted RBP11.26□□□□□ -0.61
ABR-228ENST00000574437 LY6EQ16553 131 aa11.26□□□□□ -0.61
ABR-228ENST00000574437 U3KQE9 123 aa11.26□□□□□ -0.61
ABR-228ENST00000574437 BBC3Q96PG8 261 aaPredicted RBP11.26□□□□□ -0.61
ABR-228ENST00000574437 F5H697 171 aa11.26□□□□□ -0.61
ABR-228ENST00000574437 DUSP14O95147 198 aaKnown RBP11.26□□□□□ -0.61
ABR-228ENST00000574437 PLEKHB2Q96CS7 222 aa11.26□□□□□ -0.61
ABR-228ENST00000574437 LINC01549A6NIU2 74 aa11.25□□□□□ -0.61
ABR-228ENST00000574437 C20orf78Q9BR46 151 aa11.25□□□□□ -0.61
ABR-228ENST00000574437 PTPN13Q12923 2485 aa11.24□□□□□ -0.61
ABR-228ENST00000574437 ABCA12Q86UK0 2595 aa11.24□□□□□ -0.61
ABR-228ENST00000574437 JPT2Q9H910 190 aa11.24□□□□□ -0.61
ABR-228ENST00000574437 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.24□□□□□ -0.616e-7■■■■■ 27.7
ABR-228ENST00000574437 OVOL1O14753 267 aa11.24□□□□□ -0.61
ABR-228ENST00000574437 PF4V1P10720 104 aa11.24□□□□□ -0.61
ABR-228ENST00000574437 PSMB2P49721 201 aa11.24□□□□□ -0.61
ABR-228ENST00000574437 GPHB5Q86YW7 130 aa11.24□□□□□ -0.61
ABR-228ENST00000574437 ZNF418Q8TF45 676 aaPredicted RBP11.24□□□□□ -0.61
ABR-228ENST00000574437 MORN3Q6PF18 240 aaPredicted RBP11.23□□□□□ -0.61
ABR-228ENST00000574437 MOB4Q9Y3A3 225 aa11.23□□□□□ -0.61
ABR-228ENST00000574437 CHD6Q8TD26 2715 aa11.23□□□□□ -0.61
ABR-228ENST00000574437 A0A087WWL8 130 aa11.23□□□□□ -0.61
ABR-228ENST00000574437 TGFAP01135 160 aa11.23□□□□□ -0.61
ABR-228ENST00000574437 TP53TG1Q9Y2A0 90 aa11.23□□□□□ -0.61
ABR-228ENST00000574437 LENEPQ9Y5L5 61 aa11.23□□□□□ -0.61
ABR-228ENST00000574437 LMO4P61968 165 aa11.22□□□□□ -0.61
ABR-228ENST00000574437 FAM74A4Q5TZK3 123 aa11.22□□□□□ -0.61
ABR-228ENST00000574437 TMEM238LA0A1B0GVL6 79 aa11.22□□□□□ -0.61
ABR-228ENST00000574437 A6NJY4 79 aa11.22□□□□□ -0.61
ABR-228ENST00000574437 NDUFS8O00217 210 aa11.22□□□□□ -0.61
ABR-228ENST00000574437 RPL39P62891 51 aaKnown RBP11.22□□□□□ -0.61
ABR-228ENST00000574437 TMEM170BQ5T4T1 132 aa11.22□□□□□ -0.61
ABR-228ENST00000574437 C11orf86A6NJI1 115 aa11.21□□□□□ -0.61
ABR-228ENST00000574437 FAM223BA6NKX1 122 aa11.21□□□□□ -0.61
ABR-228ENST00000574437 RNASE3P12724 160 aaKnown RBP11.21□□□□□ -0.61
ABR-228ENST00000574437 FAM223AQ8IWN6 122 aa11.21□□□□□ -0.61
ABR-228ENST00000574437 ZFP2Q6ZN57 461 aa11.2□□□□□ -0.62
ABR-228ENST00000574437 RHPN1-AS1Q9BWJ2 59 aa11.2□□□□□ -0.62
ABR-228ENST00000574437 IGKV3-20P01619 116 aa11.2□□□□□ -0.62
ABR-228ENST00000574437 FAM159AQ6UWV7 190 aa11.2□□□□□ -0.62
ABR-228ENST00000574437 RNF223E7ERA6 249 aa11.2□□□□□ -0.62
ABR-228ENST00000574437 PRO0461Q9UI25 63 aa11.2□□□□□ -0.62
ABR-228ENST00000574437 DLX4Q92988 240 aaPredicted RBP11.19□□□□□ -0.62
ABR-228ENST00000574437 ZNF256Q9Y2P7 627 aaPredicted RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms