RNA–Protein interactions for RNA: ENST00000573600.5

CTDNEP1-208, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CTDNEP1, Length 1,724 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-208ENST00000573600 PPBPP02775 128 aa21.48■■□□□ 1.03
CTDNEP1-208ENST00000573600 RBMY1DP0C7P1 496 aaKnown RBP21.48■■□□□ 1.03
CTDNEP1-208ENST00000573600 PRELID3AQ96N28 172 aa21.48■■□□□ 1.03
CTDNEP1-208ENST00000573600 FAM110AQ9BQ89 295 aa21.48■■□□□ 1.03
CTDNEP1-208ENST00000573600 CKS2P33552 79 aa21.47■■□□□ 1.03
CTDNEP1-208ENST00000573600 CHCHD1Q96BP2 118 aaKnown RBP21.47■■□□□ 1.03
CTDNEP1-208ENST00000573600 CRXO43186 299 aaPredicted RBP21.46■■□□□ 1.03
CTDNEP1-208ENST00000573600 HSBP1O75506 76 aa21.46■■□□□ 1.03
CTDNEP1-208ENST00000573600 FXYD7P58549 80 aa21.46■■□□□ 1.03
CTDNEP1-208ENST00000573600 PYY3Q5JQD4 70 aa21.46■■□□□ 1.03
CTDNEP1-208ENST00000573600 RNASEKQ6P5S7 137 aaKnown RBP21.46■■□□□ 1.03
CTDNEP1-208ENST00000573600 CITED1Q99966 193 aa21.46■■□□□ 1.03
CTDNEP1-208ENST00000573600 STHQ8IWL8 128 aa21.46■■□□□ 1.03
CTDNEP1-208ENST00000573600 F8P00451 2351 aa21.45■■□□□ 1.03
CTDNEP1-208ENST00000573600 M0R381 172 aa21.45■■□□□ 1.02
CTDNEP1-208ENST00000573600 EVI2AP22794 236 aa21.45■■□□□ 1.02
CTDNEP1-208ENST00000573600 AMTP48728 403 aa21.45■■□□□ 1.02
CTDNEP1-208ENST00000573600 BEAN1Q3B7T3 259 aa21.44■■□□□ 1.02
CTDNEP1-208ENST00000573600 IGHV3-16A0A0C4DH30 117 aa21.43■■□□□ 1.02
CTDNEP1-208ENST00000573600 NXPH4O95158 308 aa21.43■■□□□ 1.02
CTDNEP1-208ENST00000573600 LINC00614P0C842 121 aa21.43■■□□□ 1.02
CTDNEP1-208ENST00000573600 URB1-AS1Q96HZ7 61 aa21.43■■□□□ 1.02
CTDNEP1-208ENST00000573600 LAMTOR2Q9Y2Q5 125 aa21.43■■□□□ 1.02
CTDNEP1-208ENST00000573600 TRGV11A0A075B6L2 103 aa21.43■■□□□ 1.02
CTDNEP1-208ENST00000573600 PMCHP20382 165 aa21.43■■□□□ 1.02
CTDNEP1-208ENST00000573600 C20orf144Q9BQM9 153 aa21.43■■□□□ 1.02
CTDNEP1-208ENST00000573600 JOSD1Q15040 202 aaPredicted RBP21.42■■□□□ 1.02
CTDNEP1-208ENST00000573600 Q8N1Y9 231 aa21.42■■□□□ 1.02
CTDNEP1-208ENST00000573600 C9orf85Q96MD7 179 aa21.41■■□□□ 1.02
CTDNEP1-208ENST00000573600 TRPT1Q86TN4 253 aaKnown RBP21.41■■□□□ 1.02
CTDNEP1-208ENST00000573600 RBMY1A1P0DJD3 496 aaKnown RBP21.4■■□□□ 1.02
CTDNEP1-208ENST00000573600 RBMY1CP0DJD4 496 aa21.4■■□□□ 1.02
CTDNEP1-208ENST00000573600 INSL3P51460 131 aa21.4■■□□□ 1.02
CTDNEP1-208ENST00000573600 RBMY1FQ15415 496 aaKnown RBP21.4■■□□□ 1.02
CTDNEP1-208ENST00000573600 FAM19A2Q8N3H0 131 aa21.39■■□□□ 1.01
CTDNEP1-208ENST00000573600 PRSS3P2Q8NHM4 247 aa21.39■■□□□ 1.01
CTDNEP1-208ENST00000573600 AP1S3Q96PC3 154 aa21.39■■□□□ 1.01
CTDNEP1-208ENST00000573600 DPH3P1Q9H4G8 78 aa21.39■■□□□ 1.01
CTDNEP1-208ENST00000573600 SMKR1H3BMG3 65 aa21.38■■□□□ 1.01
CTDNEP1-208ENST00000573600 INSP01308 110 aa21.38■■□□□ 1.01
CTDNEP1-208ENST00000573600 SPRY2O43597 315 aa21.38■■□□□ 1.01
CTDNEP1-208ENST00000573600 NUTF2P61970 127 aaKnown RBP21.38■■□□□ 1.01
CTDNEP1-208ENST00000573600 NIT2Q9NQR4 276 aa21.38■■□□□ 1.01
CTDNEP1-208ENST00000573600 CBY3A6NI87 242 aa21.37■■□□□ 1.01
CTDNEP1-208ENST00000573600 NCR2O95944 276 aa21.37■■□□□ 1.01
CTDNEP1-208ENST00000573600 NPYP01303 97 aa21.37■■□□□ 1.01
CTDNEP1-208ENST00000573600 Q6ZWC4 215 aa21.37■■□□□ 1.01
CTDNEP1-208ENST00000573600 LINC00467Q9BRT7 94 aa21.37■■□□□ 1.01
CTDNEP1-208ENST00000573600 MDFICQ9P1T7 246 aa21.37■■□□□ 1.01
CTDNEP1-208ENST00000573600 FA2HQ7L5A8 372 aa21.36■■□□□ 1.01
CTDNEP1-208ENST00000573600 SYT8Q8NBV8 401 aa21.36■■□□□ 1.01
CTDNEP1-208ENST00000573600 MRAP2Q96G30 205 aa21.36■■□□□ 1.01
CTDNEP1-208ENST00000573600 C9orf66Q5T8R8 295 aa21.35■■□□□ 1.01
CTDNEP1-208ENST00000573600 MAP1LC3AQ9H492 121 aa21.35■■□□□ 1.01
CTDNEP1-208ENST00000573600 AP5S1Q9NUS5 200 aa21.35■■□□□ 1.01
CTDNEP1-208ENST00000573600 C19orf73Q9NVV2 129 aa21.35■■□□□ 1.01
CTDNEP1-208ENST00000573600 MUC4Q99102 2169 aa21.34■■□□□ 1.01
CTDNEP1-208ENST00000573600 C14orf178Q8N769 122 aaPredicted RBP21.34■■□□□ 1.01
CTDNEP1-208ENST00000573600 TNFRSF6BO95407 300 aa21.33■■□□□ 1.01
CTDNEP1-208ENST00000573600 LOC389332A0A1B0GUA5 103 aa21.32■■□□□ 1
CTDNEP1-208ENST00000573600 IFI27P40305 119 aaPredicted RBP21.32■■□□□ 1
CTDNEP1-208ENST00000573600 SMIM17P0DL12 118 aa21.32■■□□□ 1
CTDNEP1-208ENST00000573600 LINC01587Q99440 93 aa21.32■■□□□ 1
CTDNEP1-208ENST00000573600 IGHV1-24A0A0C4DH33 117 aa21.31■■□□□ 1
CTDNEP1-208ENST00000573600 GSN-AS1Q9NRJ2 163 aa21.3■■□□□ 1
CTDNEP1-208ENST00000573600 GAS8-AS1O95177 125 aa21.29■■□□□ 1
CTDNEP1-208ENST00000573600 POM121L12Q8N7R1 296 aa21.29■■□□□ 1
CTDNEP1-208ENST00000573600 XCL2Q9UBD3 114 aa21.29■■□□□ 1
CTDNEP1-208ENST00000573600 KIF25-AS1Q9Y6Z4 181 aa21.29■■□□□ 1
CTDNEP1-208ENST00000573600 PRSS47A8MTI9 375 aa21.28■■□□□ 1
CTDNEP1-208ENST00000573600 SCGB1D1O95968 90 aa21.28■■□□□ 1
CTDNEP1-208ENST00000573600 HTN1P15515 57 aa21.28■■□□□ 1
CTDNEP1-208ENST00000573600 NRACQ8N912 160 aa21.28■■□□□ 1
CTDNEP1-208ENST00000573600 MCRIP2Q9BUT9 160 aaKnown RBP21.28■■□□□ 1
CTDNEP1-208ENST00000573600 NXT2Q9NPJ8 142 aaKnown RBP21.28■■□□□ 1
CTDNEP1-208ENST00000573600 TRAV26-2A0A0B4J265 109 aa21.27■■□□□ 1
CTDNEP1-208ENST00000573600 MGPP08493 103 aa21.27■■□□□ 1
CTDNEP1-208ENST00000573600 GATA1P15976 413 aaPredicted RBP21.27■■□□□ 1
CTDNEP1-208ENST00000573600 ZNF415Q09FC8 603 aa21.27■■□□□ 1
CTDNEP1-208ENST00000573600 DEFB125Q8N687 156 aa21.27■■□□□ 1
CTDNEP1-208ENST00000573600 PMCHL1Q16048 86 aa21.26■□□□□ 0.99
CTDNEP1-208ENST00000573600 KRTDAPP60985 99 aa21.26■□□□□ 0.99
CTDNEP1-208ENST00000573600 CDPF1Q6NVV7 123 aa21.26■□□□□ 0.99
CTDNEP1-208ENST00000573600 TMEM208Q9BTX3 173 aa21.25■□□□□ 0.99
CTDNEP1-208ENST00000573600 WFDC10AQ9H1F0 79 aa21.25■□□□□ 0.99
CTDNEP1-208ENST00000573600 LEPROTL1O95214 131 aa21.24■□□□□ 0.99
CTDNEP1-208ENST00000573600 PPP1R17O96001 155 aa21.24■□□□□ 0.99
CTDNEP1-208ENST00000573600 KRTAP24-1Q3LI83 254 aa21.24■□□□□ 0.99
CTDNEP1-208ENST00000573600 MORN3Q6PF18 240 aaPredicted RBP21.24■□□□□ 0.99
CTDNEP1-208ENST00000573600 LINC01546A6NGU7 62 aa21.24■□□□□ 0.99
CTDNEP1-208ENST00000573600 LINC00315P59091 139 aa21.24■□□□□ 0.99
CTDNEP1-208ENST00000573600 ZNF876PQ49A33 203 aa21.24■□□□□ 0.99
CTDNEP1-208ENST00000573600 GTSCR1Q86UQ5 136 aa21.24■□□□□ 0.99
CTDNEP1-208ENST00000573600 PTH2Q96A98 100 aa21.24■□□□□ 0.99
CTDNEP1-208ENST00000573600 C3orf79P0CE67 100 aa21.23■□□□□ 0.99
CTDNEP1-208ENST00000573600 PIK3CD-AS1Q5SR53 167 aa21.23■□□□□ 0.99
CTDNEP1-208ENST00000573600 C1orf158Q8N1D5 194 aa21.23■□□□□ 0.99
CTDNEP1-208ENST00000573600 Q8N8P6 123 aa21.23■□□□□ 0.99
CTDNEP1-208ENST00000573600 C1QTNF4Q9BXJ3 329 aa21.23■□□□□ 0.99
CTDNEP1-208ENST00000573600 JPT2Q9H910 190 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms