RNA–Protein interactions for RNA: ENST00000566889.5

FANCA-221, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-221ENST00000566889 TRAV21A0A0B4J279 112 aa18.97■□□□□ 0.63
FANCA-221ENST00000566889 IGHV3-66A0A0C4DH42 116 aa18.97■□□□□ 0.63
FANCA-221ENST00000566889 J3QQQ9 107 aa18.97■□□□□ 0.63
FANCA-221ENST00000566889 CLEC3BP05452 202 aa18.97■□□□□ 0.63
FANCA-221ENST00000566889 LGALS3P17931 250 aaKnown RBP18.97■□□□□ 0.63
FANCA-221ENST00000566889 KLK9Q2XQG4 91 aa18.97■□□□□ 0.63
FANCA-221ENST00000566889 C15orf32Q32M92 178 aa18.97■□□□□ 0.63
FANCA-221ENST00000566889 PRR9Q5T870 116 aa18.97■□□□□ 0.63
FANCA-221ENST00000566889 KLK9Q9UKQ9 250 aa18.97■□□□□ 0.63
FANCA-221ENST00000566889 TP53TG1Q9Y2A0 90 aa18.97■□□□□ 0.63
FANCA-221ENST00000566889 ZZEF1O43149 2961 aa18.97■□□□□ 0.63
FANCA-221ENST00000566889 TRAV8-4A0A0B4J246 113 aa18.97■□□□□ 0.63
FANCA-221ENST00000566889 A4D1N5 150 aa18.97■□□□□ 0.63
FANCA-221ENST00000566889 PRR30Q53SZ7 412 aaPredicted RBP18.97■□□□□ 0.63
FANCA-221ENST00000566889 TMEM170BQ5T4T1 132 aa18.96■□□□□ 0.63
FANCA-221ENST00000566889 FAM110DQ8TAY7 271 aaPredicted RBP18.96■□□□□ 0.63
FANCA-221ENST00000566889 METTL26Q96S19 204 aa18.96■□□□□ 0.63
FANCA-221ENST00000566889 LYNX1G3V0Z9 82 aa18.96■□□□□ 0.63
FANCA-221ENST00000566889 LYNX1P0DP58 116 aa18.96■□□□□ 0.63
FANCA-221ENST00000566889 LINC01620Q4KN68 170 aa18.96■□□□□ 0.63
FANCA-221ENST00000566889 CFAP47Q6ZTR5 3102 aa18.95■□□□□ 0.62
FANCA-221ENST00000566889 TRAV16A0A0A6YYK6 109 aaPredicted RBP18.95■□□□□ 0.62
FANCA-221ENST00000566889 MRPL23Q16540 153 aaKnown RBP18.95■□□□□ 0.62
FANCA-221ENST00000566889 OR10J6PQ8NGY7 276 aa18.95■□□□□ 0.62
FANCA-221ENST00000566889 LINC00477Q96M19 166 aa18.95■□□□□ 0.62
FANCA-221ENST00000566889 IGHV7-81A0A0B4J1V7 117 aa18.94■□□□□ 0.62
FANCA-221ENST00000566889 EBI3Q14213 229 aa18.94■□□□□ 0.62
FANCA-221ENST00000566889 ODF3Q96PU9 254 aa18.94■□□□□ 0.62
FANCA-221ENST00000566889 M0R1W7 72 aa18.94■□□□□ 0.62
FANCA-221ENST00000566889 ARL3P36405 182 aa18.94■□□□□ 0.62
FANCA-221ENST00000566889 EMP1P54849 157 aa18.94■□□□□ 0.62
FANCA-221ENST00000566889 HERV-K104P63124 156 aa18.94■□□□□ 0.62
FANCA-221ENST00000566889 IGHV4OR15-8A0A075B7B6 117 aa18.93■□□□□ 0.62
FANCA-221ENST00000566889 A0A087WW49 117 aa18.93■□□□□ 0.62
FANCA-221ENST00000566889 ANXA2RQ3ZCQ2 193 aa18.93■□□□□ 0.62
FANCA-221ENST00000566889 ZNF876PQ49A33 203 aa18.93■□□□□ 0.62
FANCA-221ENST00000566889 SPENQ96T58 3664 aaKnown RBP18.93■□□□□ 0.62
FANCA-221ENST00000566889 TRBV10-2A0A0K0K1G8 114 aa18.93■□□□□ 0.62
FANCA-221ENST00000566889 OOSP1A8MZH6 123 aa18.93■□□□□ 0.62
FANCA-221ENST00000566889 SHISA2Q6UWI4 295 aa18.93■□□□□ 0.62
FANCA-221ENST00000566889 C9orf139Q6ZV77 190 aa18.92■□□□□ 0.62
FANCA-221ENST00000566889 C16orf92Q96LL3 132 aa18.92■□□□□ 0.62
FANCA-221ENST00000566889 U3KQE9 123 aa18.92■□□□□ 0.62
FANCA-221ENST00000566889 C15orf53Q8NAA6 179 aa18.92■□□□□ 0.62
FANCA-221ENST00000566889 SMIM20Q8N5G0 67 aa18.91■□□□□ 0.62
FANCA-221ENST00000566889 ZFAND2AQ8N6M9 145 aa18.91■□□□□ 0.62
FANCA-221ENST00000566889 ZNRF2Q8NHG8 242 aa18.91■□□□□ 0.62
FANCA-221ENST00000566889 IGHV3OR16-13A0A075B7E8 117 aa18.9■□□□□ 0.62
FANCA-221ENST00000566889 IGHV3-74A0A0B4J1X5 117 aa18.9■□□□□ 0.62
FANCA-221ENST00000566889 LEPROTO15243 131 aa18.9■□□□□ 0.62
FANCA-221ENST00000566889 EIF4EBP3O60516 100 aaPredicted RBP18.9■□□□□ 0.62
FANCA-221ENST00000566889 POLR2KP53803 58 aaKnown RBP18.9■□□□□ 0.62
FANCA-221ENST00000566889 H3BMM0 161 aa18.89■□□□□ 0.61
FANCA-221ENST00000566889 VCYO14598 125 aa18.89■□□□□ 0.61
FANCA-221ENST00000566889 FAM159AQ6UWV7 190 aa18.89■□□□□ 0.61
FANCA-221ENST00000566889 ITLN2Q8WWU7 325 aaPredicted RBP18.89■□□□□ 0.61
FANCA-221ENST00000566889 UBE2WQ96B02 151 aa18.89■□□□□ 0.61
FANCA-221ENST00000566889 ROS1P08922 2347 aa18.89■□□□□ 0.61
FANCA-221ENST00000566889 TRBV30A0A0K0K1B3 111 aa18.89■□□□□ 0.61
FANCA-221ENST00000566889 CLEC19AQ6UXS0 136 aa18.88■□□□□ 0.61
FANCA-221ENST00000566889 ZDBF2Q9HCK1 2354 aa18.88■□□□□ 0.61
FANCA-221ENST00000566889 LGALS9O00182 355 aa18.88■□□□□ 0.61
FANCA-221ENST00000566889 NXPH4O95158 308 aa18.88■□□□□ 0.61
FANCA-221ENST00000566889 Q1RN00 199 aa18.88■□□□□ 0.61
FANCA-221ENST00000566889 CCDC140Q96MF4 163 aa18.88■□□□□ 0.61
FANCA-221ENST00000566889 SPRY2O43597 315 aa18.87■□□□□ 0.61
FANCA-221ENST00000566889 EEF1AKMT3Q96AZ1 226 aa18.87■□□□□ 0.61
FANCA-221ENST00000566889 MDFICQ9P1T7 246 aa18.87■□□□□ 0.61
FANCA-221ENST00000566889 TEX49A0A1B0GTD5 131 aa18.86■□□□□ 0.61
FANCA-221ENST00000566889 OVOL1O14753 267 aa18.86■□□□□ 0.61
FANCA-221ENST00000566889 TMEM95Q3KNT9 176 aa18.86■□□□□ 0.61
FANCA-221ENST00000566889 MUSTN1Q8IVN3 82 aa18.86■□□□□ 0.61
FANCA-221ENST00000566889 ZFHX4Q86UP3 3567 aa18.86■□□□□ 0.61
FANCA-221ENST00000566889 TRAV2A0A0B4J234 112 aa18.86■□□□□ 0.61
FANCA-221ENST00000566889 IGF1P05019 195 aa18.86■□□□□ 0.61
FANCA-221ENST00000566889 TCF15Q12870 199 aa18.86■□□□□ 0.61
FANCA-221ENST00000566889 VMO1Q7Z5L0 202 aa18.86■□□□□ 0.61
FANCA-221ENST00000566889 Q8N9W7 124 aa18.86■□□□□ 0.61
FANCA-221ENST00000566889 KIF25-AS1Q9Y6Z4 181 aa18.86■□□□□ 0.61
FANCA-221ENST00000566889 IGHV3-49A0A0A0MS15 119 aa18.85■□□□□ 0.61
FANCA-221ENST00000566889 A0A0J9YX75 114 aa18.85■□□□□ 0.61
FANCA-221ENST00000566889 H7C2G1 150 aa18.85■□□□□ 0.61
FANCA-221ENST00000566889 PKDREJQ9NTG1 2253 aa18.85■□□□□ 0.61
FANCA-221ENST00000566889 TRBV7-1A0A0A6YYK4 115 aa18.85■□□□□ 0.61
FANCA-221ENST00000566889 TMEM223A0PJW6 202 aa18.85■□□□□ 0.61
FANCA-221ENST00000566889 J3KRW8 73 aa18.85■□□□□ 0.61
FANCA-221ENST00000566889 RPL39P62891 51 aaKnown RBP18.85■□□□□ 0.61
FANCA-221ENST00000566889 MINOS1Q5TGZ0 78 aa18.85■□□□□ 0.61
FANCA-221ENST00000566889 MINOS1-NBL1R4GNA1 71 aa18.85■□□□□ 0.61
FANCA-221ENST00000566889 GPR179Q6PRD1 2367 aa18.84■□□□□ 0.61
FANCA-221ENST00000566889 LINC00315P59091 139 aa18.84■□□□□ 0.61
FANCA-221ENST00000566889 TNRC18O15417 2968 aaPredicted RBP18.84■□□□□ 0.61
FANCA-221ENST00000566889 IGHV4-39P01824 125 aa18.84■□□□□ 0.61
FANCA-221ENST00000566889 CD3EP07766 207 aa18.84■□□□□ 0.61
FANCA-221ENST00000566889 RNASE3P12724 160 aaKnown RBP18.84■□□□□ 0.61
FANCA-221ENST00000566889 ECSCRQ19T08 205 aa18.84■□□□□ 0.61
FANCA-221ENST00000566889 C20orf173Q96LM9 149 aa18.84■□□□□ 0.61
FANCA-221ENST00000566889 LOC400499M0QZD8 3231 aa18.84■□□□□ 0.61
FANCA-221ENST00000566889 KALRNO60229 2985 aa18.83■□□□□ 0.61
FANCA-221ENST00000566889 FAM240AA0A1B0GVK7 77 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 151.2 ms