RNA–Protein interactions for RNA: ENST00000564752.1

CLN6-204, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 900 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-204ENST00000564752 FMC1Q96HJ9 113 aa12.59□□□□□ -0.39
CLN6-204ENST00000564752 TCEAL7Q9BRU2 100 aa12.59□□□□□ -0.39
CLN6-204ENST00000564752 PGPEP1Q9NXJ5 209 aa12.59□□□□□ -0.39
CLN6-204ENST00000564752 TNFRSF18Q9Y5U5 241 aa12.59□□□□□ -0.39
CLN6-204ENST00000564752 FABP5P3A8MUU1 101 aa12.58□□□□□ -0.4
CLN6-204ENST00000564752 PFDN1O60925 122 aa12.58□□□□□ -0.4
CLN6-204ENST00000564752 RNASE3P12724 160 aaKnown RBP12.58□□□□□ -0.4
CLN6-204ENST00000564752 GATA1P15976 413 aaPredicted RBP12.58□□□□□ -0.4
CLN6-204ENST00000564752 S100A4P26447 101 aaKnown RBP12.58□□□□□ -0.4
CLN6-204ENST00000564752 SFT2D1Q8WV19 159 aa12.58□□□□□ -0.4
CLN6-204ENST00000564752 IGKV3D-20A0A0C4DH25 116 aa12.57□□□□□ -0.4
CLN6-204ENST00000564752 RS1O15537 224 aa12.57□□□□□ -0.4
CLN6-204ENST00000564752 ZNF506Q5JVG8 444 aa12.57□□□□□ -0.4
CLN6-204ENST00000564752 CFAP126Q5VTH2 177 aa12.57□□□□□ -0.4
CLN6-204ENST00000564752 NHLRC2Q8NBF2 726 aa12.57□□□□□ -0.4
CLN6-204ENST00000564752 ZFP30Q9Y2G7 519 aa12.57□□□□□ -0.4
CLN6-204ENST00000564752 LOC100131303A0A0U1RQF7 123 aa12.56□□□□□ -0.4
CLN6-204ENST00000564752 A0A1B0GV50 99 aa12.56□□□□□ -0.4
CLN6-204ENST00000564752 PGPEP1LA6NFU8 196 aa12.56□□□□□ -0.4
CLN6-204ENST00000564752 CIDEAO60543 219 aa12.56□□□□□ -0.4
CLN6-204ENST00000564752 PAGE4O60829 102 aa12.56□□□□□ -0.4
CLN6-204ENST00000564752 ASIPP42127 132 aa12.56□□□□□ -0.4
CLN6-204ENST00000564752 AKR1C3P42330 323 aa12.56□□□□□ -0.4
CLN6-204ENST00000564752 DPPA3Q6W0C5 159 aa12.56□□□□□ -0.4
CLN6-204ENST00000564752 NFE4Q86UQ8 179 aa12.56□□□□□ -0.4
CLN6-204ENST00000564752 PTH2Q96A98 100 aa12.56□□□□□ -0.4
CLN6-204ENST00000564752 ZC2HC1AQ96GY0 325 aa12.56□□□□□ -0.4
CLN6-204ENST00000564752 TRAV9-2A0A087WT02 112 aa12.55□□□□□ -0.4
CLN6-204ENST00000564752 B4DEV8 164 aa12.55□□□□□ -0.4
CLN6-204ENST00000564752 EREGO14944 169 aa12.55□□□□□ -0.4
CLN6-204ENST00000564752 TPT1P13693 172 aaKnown RBP12.55□□□□□ -0.4
CLN6-204ENST00000564752 ERVFC1-1P60608 527 aa12.55□□□□□ -0.4
CLN6-204ENST00000564752 TMUB2Q71RG4 321 aa12.55□□□□□ -0.4
CLN6-204ENST00000564752 SH2D6Q7Z4S9 175 aa12.55□□□□□ -0.4
CLN6-204ENST00000564752 MBD3L1Q8WWY6 194 aa12.55□□□□□ -0.4
CLN6-204ENST00000564752 LY96Q9Y6Y9 160 aa12.55□□□□□ -0.4
CLN6-204ENST00000564752 FAT1Q14517 4588 aa12.55□□□□□ -0.4
CLN6-204ENST00000564752 IGHV3-73A0A0B4J1V6 119 aa12.54□□□□□ -0.4
CLN6-204ENST00000564752 M0R036 132 aa12.54□□□□□ -0.4
CLN6-204ENST00000564752 SH2D1AO60880 128 aa12.54□□□□□ -0.4
CLN6-204ENST00000564752 RHOHQ15669 191 aa12.54□□□□□ -0.4
CLN6-204ENST00000564752 FAM162BQ5T6X4 162 aa12.54□□□□□ -0.4
CLN6-204ENST00000564752 SLC25A29Q8N8R3 303 aa12.54□□□□□ -0.4
CLN6-204ENST00000564752 PRADC1Q9BSG0 188 aa12.54□□□□□ -0.4
CLN6-204ENST00000564752 HERC1Q15751 4861 aa12.53□□□□□ -0.4
CLN6-204ENST00000564752 TRBV6-1A0A0K0K1D8 114 aa12.53□□□□□ -0.4
CLN6-204ENST00000564752 K7EP13 123 aa12.53□□□□□ -0.4
CLN6-204ENST00000564752 LTAP01374 205 aa12.53□□□□□ -0.4
CLN6-204ENST00000564752 H2AFB1P0C5Y9 115 aa12.53□□□□□ -0.4
CLN6-204ENST00000564752 FUSP35637 526 aaKnown RBP eCLIP12.53□□□□□ -0.4
CLN6-204ENST00000564752 CRIP1P50238 77 aa12.53□□□□□ -0.4
CLN6-204ENST00000564752 CDPF1Q6NVV7 123 aa12.53□□□□□ -0.4
CLN6-204ENST00000564752 COX8CQ7Z4L0 72 aa12.53□□□□□ -0.4
CLN6-204ENST00000564752 WFDC10BQ8IUB3 73 aa12.53□□□□□ -0.4
CLN6-204ENST00000564752 IL36BQ9NZH7 164 aa12.53□□□□□ -0.4
CLN6-204ENST00000564752 TRBV6-4A0A1B0GX49 114 aa12.52□□□□□ -0.41
CLN6-204ENST00000564752 H3BVH4 76 aa12.52□□□□□ -0.41
CLN6-204ENST00000564752 MGST1P10620 155 aaKnown RBP12.52□□□□□ -0.41
CLN6-204ENST00000564752 LGALSLQ3ZCW2 172 aaPredicted RBP12.52□□□□□ -0.41
CLN6-204ENST00000564752 A8MWV9 139 aa12.51□□□□□ -0.41
CLN6-204ENST00000564752 KRBOX1C9JBD0 128 aa12.51□□□□□ -0.41
CLN6-204ENST00000564752 PIK3CD-AS1Q5SR53 167 aa12.51□□□□□ -0.41
CLN6-204ENST00000564752 PARLQ9H300 379 aa12.51□□□□□ -0.41
CLN6-204ENST00000564752 MSRB1Q9NZV6 116 aa12.51□□□□□ -0.41
CLN6-204ENST00000564752 A0A087WTM6 91 aa12.5□□□□□ -0.41
CLN6-204ENST00000564752 SCO2A0A1W2PP80 73 aa12.5□□□□□ -0.41
CLN6-204ENST00000564752 DNAH10OSP0CZ25 163 aa12.5□□□□□ -0.41
CLN6-204ENST00000564752 EVI2AP22794 236 aa12.5□□□□□ -0.41
CLN6-204ENST00000564752 TIRAPP58753 221 aa12.5□□□□□ -0.41
CLN6-204ENST00000564752 ZNF674Q2M3X9 581 aa12.5□□□□□ -0.41
CLN6-204ENST00000564752 SYT8Q8NBV8 401 aa12.5□□□□□ -0.41
CLN6-204ENST00000564752 VPS13BQ7Z7G8 4022 aa12.5□□□□□ -0.41
CLN6-204ENST00000564752 GRIFINA4D1Z8 144 aa12.49□□□□□ -0.41
CLN6-204ENST00000564752 S100A9P06702 114 aaKnown RBP12.49□□□□□ -0.41
CLN6-204ENST00000564752 ARMS2P0C7Q2 107 aa12.49□□□□□ -0.41
CLN6-204ENST00000564752 XGP55808 180 aa12.49□□□□□ -0.41
CLN6-204ENST00000564752 LINC01559Q495D7 138 aa12.49□□□□□ -0.41
CLN6-204ENST00000564752 DNLZQ5SXM8 178 aa12.49□□□□□ -0.41
CLN6-204ENST00000564752 EIF5AL1Q6IS14 154 aaKnown RBP12.49□□□□□ -0.41
CLN6-204ENST00000564752 TCTE3Q8IZS6 198 aa12.49□□□□□ -0.41
CLN6-204ENST00000564752 TMSB15BA0A087X1C1 80 aa12.48□□□□□ -0.41
CLN6-204ENST00000564752 EPM2AB3EWF7 344 aa12.48□□□□□ -0.41
CLN6-204ENST00000564752 ZFP2Q6ZN57 461 aa12.48□□□□□ -0.41
CLN6-204ENST00000564752 RAB5CP51148 216 aa12.47□□□□□ -0.41
CLN6-204ENST00000564752 MANBALQ9NQG1 85 aa12.47□□□□□ -0.41
CLN6-204ENST00000564752 PHLDA3Q9Y5J5 127 aa12.47□□□□□ -0.41
CLN6-204ENST00000564752 TRAV8-6A0A0B4J262 113 aa12.46□□□□□ -0.41
CLN6-204ENST00000564752 RHODO00212 210 aa12.46□□□□□ -0.41
CLN6-204ENST00000564752 CRYGDP07320 174 aa12.46□□□□□ -0.41
CLN6-204ENST00000564752 KRTAP10-1P60331 282 aa12.46□□□□□ -0.41
CLN6-204ENST00000564752 DMRTA1Q5VZB9 504 aa12.46□□□□□ -0.41
CLN6-204ENST00000564752 C10orf126Q8N4M7 172 aa12.46□□□□□ -0.41
CLN6-204ENST00000564752 JPT2Q9H910 190 aa12.46□□□□□ -0.41
CLN6-204ENST00000564752 GNG13Q9P2W3 67 aa12.46□□□□□ -0.41
CLN6-204ENST00000564752 IGHV3-38A0A0C4DH36 116 aa12.45□□□□□ -0.42
CLN6-204ENST00000564752 TEX46H3BTG2 121 aa12.45□□□□□ -0.42
CLN6-204ENST00000564752 M0R381 172 aa12.45□□□□□ -0.42
CLN6-204ENST00000564752 OR10J3Q5JRS4 329 aa12.45□□□□□ -0.42
CLN6-204ENST00000564752 BAGE2Q86Y30 109 aa12.45□□□□□ -0.42
CLN6-204ENST00000564752 ATP6V0E2Q8NHE4 81 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms