RNA–Protein interactions for RNA: ENST00000563623.5

ABCA3-203, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 1 (best)

Gene ABCA3, Length 3,649 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-203ENST00000563623 PSMG4Q5JS54 123 aa9.07□□□□□ -0.96
ABCA3-203ENST00000563623 OR10J6PQ8NGY7 276 aa9.07□□□□□ -0.96
ABCA3-203ENST00000563623 SPATA25Q9BR10 227 aa9.07□□□□□ -0.96
ABCA3-203ENST00000563623 ZNF815PA8K554 130 aa9.07□□□□□ -0.96
ABCA3-203ENST00000563623 SMIM2Q9BVW6 85 aa9.07□□□□□ -0.96
ABCA3-203ENST00000563623 MSRB2Q9Y3D2 182 aa9.07□□□□□ -0.96
ABCA3-203ENST00000563623 M0QXV9 152 aa9.06□□□□□ -0.96
ABCA3-203ENST00000563623 PLNP26678 52 aa9.06□□□□□ -0.96
ABCA3-203ENST00000563623 F6UB75 175 aa9.06□□□□□ -0.96
ABCA3-203ENST00000563623 GAGE2BQ13066 116 aa9.06□□□□□ -0.96
ABCA3-203ENST00000563623 LY6EQ16553 131 aa9.06□□□□□ -0.96
ABCA3-203ENST00000563623 GAGE2EQ4V326 116 aa9.06□□□□□ -0.96
ABCA3-203ENST00000563623 GAGE2DQ9UEU5 116 aa9.06□□□□□ -0.96
ABCA3-203ENST00000563623 CCDC140Q96MF4 163 aa9.06□□□□□ -0.96
ABCA3-203ENST00000563623 ZFAND3Q9H8U3 227 aa9.06□□□□□ -0.96
ABCA3-203ENST00000563623 NOTCH3Q9UM47 2321 aa9.06□□□□□ -0.96
ABCA3-203ENST00000563623 F8VRH5 84 aa9.05□□□□□ -0.96
ABCA3-203ENST00000563623 HOXA3O43365 443 aaPredicted RBP9.05□□□□□ -0.96
ABCA3-203ENST00000563623 ASIPP42127 132 aa9.05□□□□□ -0.96
ABCA3-203ENST00000563623 PSMB2P49721 201 aa9.05□□□□□ -0.96
ABCA3-203ENST00000563623 MINOS1Q5TGZ0 78 aa9.05□□□□□ -0.96
ABCA3-203ENST00000563623 FOXI2Q6ZQN5 318 aa9.05□□□□□ -0.96
ABCA3-203ENST00000563623 MINOS1-NBL1R4GNA1 71 aa9.05□□□□□ -0.96
ABCA3-203ENST00000563623 SUMO2P61956 95 aaKnown RBP9.05□□□□□ -0.96
ABCA3-203ENST00000563623 C2orf66Q6UXQ4 117 aa9.05□□□□□ -0.96
ABCA3-203ENST00000563623 NRACQ8N912 160 aa9.05□□□□□ -0.96
ABCA3-203ENST00000563623 SLC25A16P16260 332 aa9.04□□□□□ -0.96
ABCA3-203ENST00000563623 ORMDL2Q53FV1 153 aa9.04□□□□□ -0.96
ABCA3-203ENST00000563623 PRADC1Q9BSG0 188 aa9.04□□□□□ -0.96
ABCA3-203ENST00000563623 ZMAT4Q9H898 229 aa9.04□□□□□ -0.96
ABCA3-203ENST00000563623 TRAV8-2A0A0B4J237 113 aa9.04□□□□□ -0.96
ABCA3-203ENST00000563623 MYMXA0A1B0GTQ4 84 aa9.04□□□□□ -0.96
ABCA3-203ENST00000563623 GNRH2O43555 120 aa9.04□□□□□ -0.96
ABCA3-203ENST00000563623 SNCGO76070 127 aa9.04□□□□□ -0.96
ABCA3-203ENST00000563623 SCGB1C2P0DMR2 95 aa9.04□□□□□ -0.96
ABCA3-203ENST00000563623 PRR9Q5T870 116 aa9.04□□□□□ -0.96
ABCA3-203ENST00000563623 FAM74A4Q5TZK3 123 aa9.04□□□□□ -0.96
ABCA3-203ENST00000563623 KLHL30-AS1Q8NEE0 82 aa9.04□□□□□ -0.96
ABCA3-203ENST00000563623 TM2D2Q9BX73 214 aa9.04□□□□□ -0.96
ABCA3-203ENST00000563623 IGHV7-4-1A0A0J9YVY3 117 aa9.04□□□□□ -0.96
ABCA3-203ENST00000563623 OOSP1A8MZH6 123 aa9.04□□□□□ -0.96
ABCA3-203ENST00000563623 IGKV3-20P01619 116 aa9.04□□□□□ -0.96
ABCA3-203ENST00000563623 COX8CQ7Z4L0 72 aa9.04□□□□□ -0.96
ABCA3-203ENST00000563623 CNFNQ9BYD5 112 aa9.04□□□□□ -0.96
ABCA3-203ENST00000563623 LINC01549A6NIU2 74 aa9.03□□□□□ -0.96
ABCA3-203ENST00000563623 E9PLD3 99 aa9.03□□□□□ -0.96
ABCA3-203ENST00000563623 HLA-DRB4P13762 266 aa9.03□□□□□ -0.96
ABCA3-203ENST00000563623 BRD3OSQ6XYD6 125 aa9.03□□□□□ -0.96
ABCA3-203ENST00000563623 Q6ZUT4 128 aa9.03□□□□□ -0.96
ABCA3-203ENST00000563623 ZNF575Q86XF7 245 aa9.03□□□□□ -0.96
ABCA3-203ENST00000563623 HLA-DRB4X5D2U9 266 aa9.03□□□□□ -0.96
ABCA3-203ENST00000563623 CCDC179H3BU77 68 aa9.03□□□□□ -0.96
ABCA3-203ENST00000563623 BRI3O95415 125 aa9.03□□□□□ -0.96
ABCA3-203ENST00000563623 XGP55808 180 aa9.03□□□□□ -0.96
ABCA3-203ENST00000563623 RRN3P1Q2M238 152 aa9.03□□□□□ -0.96
ABCA3-203ENST00000563623 TMEM170BQ5T4T1 132 aa9.03□□□□□ -0.96
ABCA3-203ENST00000563623 MAP1AP78559 2803 aaPredicted RBP9.03□□□□□ -0.96
ABCA3-203ENST00000563623 IGLV2-18A0A075B6J9 118 aa9.03□□□□□ -0.96
ABCA3-203ENST00000563623 TRAV21A0A0B4J279 112 aa9.03□□□□□ -0.96
ABCA3-203ENST00000563623 CLPSL1A2RUU4 121 aa9.03□□□□□ -0.96
ABCA3-203ENST00000563623 RBAKDNA6NC62 111 aa9.03□□□□□ -0.96
ABCA3-203ENST00000563623 H7C2G1 150 aa9.03□□□□□ -0.96
ABCA3-203ENST00000563623 DPH3P1Q9H4G8 78 aa9.03□□□□□ -0.96
ABCA3-203ENST00000563623 SRSF2Q01130 221 aaKnown RBP9.02□□□□□ -0.97
ABCA3-203ENST00000563623 Q8N6K4 173 aa9.02□□□□□ -0.97
ABCA3-203ENST00000563623 HIVEP3Q5T1R4 2406 aa9.02□□□□□ -0.97
ABCA3-203ENST00000563623 TRAV41A0A0B4J266 112 aa9.01□□□□□ -0.97
ABCA3-203ENST00000563623 MEIG1Q5JSS6 88 aa9.01□□□□□ -0.97
ABCA3-203ENST00000563623 PHLDA1Q8WV24 401 aaPredicted RBP9.01□□□□□ -0.97
ABCA3-203ENST00000563623 PTH2Q96A98 100 aa9.01□□□□□ -0.97
ABCA3-203ENST00000563623 C20orf173Q96LM9 149 aa9.01□□□□□ -0.97
ABCA3-203ENST00000563623 A0A087WWL8 130 aa9.01□□□□□ -0.97
ABCA3-203ENST00000563623 TRBV12-3P01733 135 aa9.01□□□□□ -0.97
ABCA3-203ENST00000563623 BPESC1Q9GZL8 116 aa9.01□□□□□ -0.97
ABCA3-203ENST00000563623 TNFRSF18Q9Y5U5 241 aa9.01□□□□□ -0.97
ABCA3-203ENST00000563623 TRBV7-1A0A0A6YYK4 115 aa9.01□□□□□ -0.97
ABCA3-203ENST00000563623 KIR2DL4Q99706 377 aa9.01□□□□□ -0.97
ABCA3-203ENST00000563623 ZNF256Q9Y2P7 627 aaPredicted RBP9.01□□□□□ -0.97
ABCA3-203ENST00000563623 DCHS2Q6V1P9 2916 aa9.01□□□□□ -0.97
ABCA3-203ENST00000563623 FOXI1Q12951 378 aa9□□□□□ -0.97
ABCA3-203ENST00000563623 UNQ9165/PRO28630Q6UXU0 137 aa9□□□□□ -0.97
ABCA3-203ENST00000563623 PIFOQ8TCI5 191 aa9□□□□□ -0.97
ABCA3-203ENST00000563623 PPDPFQ9H3Y8 114 aa9□□□□□ -0.97
ABCA3-203ENST00000563623 UBE2E1P51965 193 aa9□□□□□ -0.97
ABCA3-203ENST00000563623 C9orf139Q6ZV77 190 aa9□□□□□ -0.97
ABCA3-203ENST00000563623 RASL10AQ92737 203 aa9□□□□□ -0.97
ABCA3-203ENST00000563623 ASH1LQ9NR48 2969 aaKnown RBP9□□□□□ -0.97
ABCA3-203ENST00000563623 NPFFO15130 113 aa9□□□□□ -0.97
ABCA3-203ENST00000563623 DUSP14O95147 198 aaKnown RBP9□□□□□ -0.97
ABCA3-203ENST00000563623 LGALS1P09382 135 aaKnown RBP9□□□□□ -0.97
ABCA3-203ENST00000563623 HERVK_113P61574 105 aa9□□□□□ -0.97
ABCA3-203ENST00000563623 MRPL23Q16540 153 aaKnown RBP9□□□□□ -0.97
ABCA3-203ENST00000563623 TAL2Q16559 108 aa9□□□□□ -0.97
ABCA3-203ENST00000563623 C9orf47Q6ZRZ4 202 aa9□□□□□ -0.97
ABCA3-203ENST00000563623 IGHV3-64A0A075B6Q5 118 aa8.99□□□□□ -0.97
ABCA3-203ENST00000563623 TCF15Q12870 199 aa8.99□□□□□ -0.97
ABCA3-203ENST00000563623 PLEKHB2Q96CS7 222 aa8.99□□□□□ -0.97
ABCA3-203ENST00000563623 JPT2Q9H910 190 aa8.99□□□□□ -0.97
ABCA3-203ENST00000563623 RELNP78509 3460 aa8.99□□□□□ -0.97
ABCA3-203ENST00000563623 K7ENP7 123 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 119.4 ms