RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 PIEZO1Q92508 2521 aa10.69□□□□□ -0.7
RABGGTA-220ENST00000560998 AKAP6Q13023 2319 aa10.69□□□□□ -0.7
RABGGTA-220ENST00000560998 FABP5P3A8MUU1 101 aa10.68□□□□□ -0.7
RABGGTA-220ENST00000560998 GAS8-AS1O95177 125 aa10.68□□□□□ -0.7
RABGGTA-220ENST00000560998 TCL1BO95988 128 aa10.68□□□□□ -0.7
RABGGTA-220ENST00000560998 CD7P09564 240 aa10.68□□□□□ -0.7
RABGGTA-220ENST00000560998 IFITM1P13164 125 aa10.68□□□□□ -0.7
RABGGTA-220ENST00000560998 ZFP2Q6ZN57 461 aa10.68□□□□□ -0.7
RABGGTA-220ENST00000560998 MSRB1Q9NZV6 116 aa10.68□□□□□ -0.7
RABGGTA-220ENST00000560998 NPFFO15130 113 aa10.68□□□□□ -0.7
RABGGTA-220ENST00000560998 IGHV3-23P01764 117 aa10.68□□□□□ -0.7
RABGGTA-220ENST00000560998 TTC32Q5I0X7 151 aa10.68□□□□□ -0.7
RABGGTA-220ENST00000560998 NDUFA11Q86Y39 141 aa10.68□□□□□ -0.7
RABGGTA-220ENST00000560998 NRACQ8N912 160 aa10.68□□□□□ -0.7
RABGGTA-220ENST00000560998 ASH1LQ9NR48 2969 aaKnown RBP10.68□□□□□ -0.7
RABGGTA-220ENST00000560998 IGKV2-40A0A087WW87 121 aaPredicted RBP10.67□□□□□ -0.7
RABGGTA-220ENST00000560998 ZNF815PA8K554 130 aa10.67□□□□□ -0.7
RABGGTA-220ENST00000560998 IGKV2D-40P01614 121 aaPredicted RBP10.67□□□□□ -0.7
RABGGTA-220ENST00000560998 ORM1P02763 201 aa10.67□□□□□ -0.7
RABGGTA-220ENST00000560998 SCGB1C2P0DMR2 95 aa10.67□□□□□ -0.7
RABGGTA-220ENST00000560998 ZNF80P51504 273 aaPredicted RBP10.67□□□□□ -0.7
RABGGTA-220ENST00000560998 SRSF9Q13242 221 aaKnown RBP eCLIP10.67□□□□□ -0.7
RABGGTA-220ENST00000560998 ORMDL2Q53FV1 153 aa10.67□□□□□ -0.7
RABGGTA-220ENST00000560998 ZNF575Q86XF7 245 aa10.67□□□□□ -0.7
RABGGTA-220ENST00000560998 FAM110DQ8TAY7 271 aaPredicted RBP10.67□□□□□ -0.7
RABGGTA-220ENST00000560998 AGRNO00468 2067 aa10.67□□□□□ -0.7
RABGGTA-220ENST00000560998 RPL7P18124 248 aaKnown RBP10.66□□□□□ -0.7
RABGGTA-220ENST00000560998 KLK9Q2XQG4 91 aa10.66□□□□□ -0.7
RABGGTA-220ENST00000560998 SCGB1D4Q6XE38 83 aa10.66□□□□□ -0.7
RABGGTA-220ENST00000560998 PRADC1Q9BSG0 188 aa10.66□□□□□ -0.7
RABGGTA-220ENST00000560998 KLK9Q9UKQ9 250 aa10.66□□□□□ -0.7
RABGGTA-220ENST00000560998 TNFRSF18Q9Y5U5 241 aa10.66□□□□□ -0.7
RABGGTA-220ENST00000560998 CTSGP08311 255 aa10.66□□□□□ -0.7
RABGGTA-220ENST00000560998 NEXN-AS1Q8NBZ9 246 aa10.66□□□□□ -0.7
RABGGTA-220ENST00000560998 LINC01600Q96MT4 127 aa10.66□□□□□ -0.7
RABGGTA-220ENST00000560998 SCGB2A1O75556 95 aa10.65□□□□□ -0.7
RABGGTA-220ENST00000560998 COX6B1P14854 86 aa10.65□□□□□ -0.7
RABGGTA-220ENST00000560998 GATA1P15976 413 aaPredicted RBP10.65□□□□□ -0.7
RABGGTA-220ENST00000560998 TOMM6Q96B49 74 aa10.65□□□□□ -0.7
RABGGTA-220ENST00000560998 CFAP46Q8IYW2 2715 aa10.65□□□□□ -0.7
RABGGTA-220ENST00000560998 ATP6V0E1O15342 81 aa10.65□□□□□ -0.71
RABGGTA-220ENST00000560998 ECSCRQ19T08 205 aa10.65□□□□□ -0.71
RABGGTA-220ENST00000560998 C10orf126Q8N4M7 172 aa10.65□□□□□ -0.71
RABGGTA-220ENST00000560998 SMIM20Q8N5G0 67 aa10.65□□□□□ -0.71
RABGGTA-220ENST00000560998 ABCA2Q9BZC7 2435 aa10.64□□□□□ -0.71
RABGGTA-220ENST00000560998 H3BVH4 76 aa10.64□□□□□ -0.71
RABGGTA-220ENST00000560998 SLC25A20O43772 301 aa10.64□□□□□ -0.71
RABGGTA-220ENST00000560998 MRPL23Q16540 153 aaKnown RBP10.64□□□□□ -0.71
RABGGTA-220ENST00000560998 SCGB3A1Q96QR1 104 aa10.64□□□□□ -0.71
RABGGTA-220ENST00000560998 KIR2DL4Q99706 377 aa10.64□□□□□ -0.71
RABGGTA-220ENST00000560998 SMIM2Q9BVW6 85 aa10.64□□□□□ -0.71
RABGGTA-220ENST00000560998 IGHV4-4A0A075B6R2 117 aa10.63□□□□□ -0.71
RABGGTA-220ENST00000560998 TRAV8-2A0A0B4J237 113 aa10.63□□□□□ -0.71
RABGGTA-220ENST00000560998 HLA-DMBP28068 263 aa10.63□□□□□ -0.71
RABGGTA-220ENST00000560998 CCL19Q99731 98 aa10.63□□□□□ -0.71
RABGGTA-220ENST00000560998 PIMREGQ9BSJ6 248 aa10.63□□□□□ -0.71
RABGGTA-220ENST00000560998 IGHV4-61A0A0C4DH41 118 aa10.63□□□□□ -0.71
RABGGTA-220ENST00000560998 RBAKDNA6NC62 111 aa10.63□□□□□ -0.71
RABGGTA-220ENST00000560998 CCDC179H3BU77 68 aa10.63□□□□□ -0.71
RABGGTA-220ENST00000560998 ARL3P36405 182 aa10.63□□□□□ -0.71
RABGGTA-220ENST00000560998 C15orf32Q32M92 178 aa10.63□□□□□ -0.71
RABGGTA-220ENST00000560998 PAPPA-AS1Q5QFB9 102 aa10.63□□□□□ -0.71
RABGGTA-220ENST00000560998 OR10J6PQ8NGY7 276 aa10.63□□□□□ -0.71
RABGGTA-220ENST00000560998 Q8TAT8 98 aa10.63□□□□□ -0.71
RABGGTA-220ENST00000560998 LINC01548A6NM66 108 aa10.62□□□□□ -0.71
RABGGTA-220ENST00000560998 HERVK_113P61574 105 aa10.62□□□□□ -0.71
RABGGTA-220ENST00000560998 ERCC8Q13216 396 aa10.62□□□□□ -0.71
RABGGTA-220ENST00000560998 C5orf56Q8N8D9 126 aa10.62□□□□□ -0.71
RABGGTA-220ENST00000560998 C10orf105Q8TEF2 133 aa10.62□□□□□ -0.71
RABGGTA-220ENST00000560998 SLC50A1Q9BRV3 221 aa10.62□□□□□ -0.71
RABGGTA-220ENST00000560998 IGHV1-69DA0A0B4J2H0 117 aa10.61□□□□□ -0.71
RABGGTA-220ENST00000560998 IGHV1-69P01742 117 aa10.61□□□□□ -0.71
RABGGTA-220ENST00000560998 PRB4P10163 310 aaPredicted RBP10.61□□□□□ -0.71
RABGGTA-220ENST00000560998 TMEM126AQ9H061 195 aa10.61□□□□□ -0.71
RABGGTA-220ENST00000560998 PRO1854Q9UHT4 67 aa10.61□□□□□ -0.71
RABGGTA-220ENST00000560998 IGSF10Q6WRI0 2623 aa10.61□□□□□ -0.71
RABGGTA-220ENST00000560998 IGHV3OR16-10A0A075B7F0 116 aa10.61□□□□□ -0.71
RABGGTA-220ENST00000560998 G3V318 75 aa10.61□□□□□ -0.71
RABGGTA-220ENST00000560998 CLEC3BP05452 202 aa10.61□□□□□ -0.71
RABGGTA-220ENST00000560998 RPL13AP40429 203 aaKnown RBP10.61□□□□□ -0.71
RABGGTA-220ENST00000560998 PLEKHB2Q96CS7 222 aa10.61□□□□□ -0.71
RABGGTA-220ENST00000560998 TRAV4A0A0B4J268 109 aa10.6□□□□□ -0.71
RABGGTA-220ENST00000560998 A0A0J9YY99 117 aa10.6□□□□□ -0.71
RABGGTA-220ENST00000560998 P0DMU3 169 aa10.6□□□□□ -0.71
RABGGTA-220ENST00000560998 FAM231AP0DMU4 169 aa10.6□□□□□ -0.71
RABGGTA-220ENST00000560998 FAM231CP0DMU5 169 aa10.6□□□□□ -0.71
RABGGTA-220ENST00000560998 MDFICQ9P1T7 246 aa10.6□□□□□ -0.71
RABGGTA-220ENST00000560998 SMAD5-AS1Q9Y6J3 95 aa10.6□□□□□ -0.71
RABGGTA-220ENST00000560998 SPTAN1Q13813 2472 aaKnown RBP10.6□□□□□ -0.71
RABGGTA-220ENST00000560998 IGHV3-35A0A0C4DH35 117 aa10.59□□□□□ -0.71
RABGGTA-220ENST00000560998 TRGV3P03979 118 aa10.59□□□□□ -0.71
RABGGTA-220ENST00000560998 CFC1BP0CG36 223 aa10.59□□□□□ -0.71
RABGGTA-220ENST00000560998 CFC1P0CG37 223 aa10.59□□□□□ -0.71
RABGGTA-220ENST00000560998 SFTA2Q6UW10 78 aa10.59□□□□□ -0.71
RABGGTA-220ENST00000560998 TMEM219Q86XT9 240 aa10.59□□□□□ -0.71
RABGGTA-220ENST00000560998 BAALCQ8WXS3 180 aa10.59□□□□□ -0.71
RABGGTA-220ENST00000560998 ZFAND3Q9H8U3 227 aa10.59□□□□□ -0.71
RABGGTA-220ENST00000560998 MOB4Q9Y3A3 225 aa10.59□□□□□ -0.71
RABGGTA-220ENST00000560998 IGHV3OR16-8A0A075B7F1 116 aa10.59□□□□□ -0.71
RABGGTA-220ENST00000560998 IGHV3-30P01768 117 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 143.7 ms