RNA–Protein interactions for RNA: ENST00000560463.5

TRAF3-209, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-209ENST00000560463 GIG44P09565 113 aaPredicted RBP6.28□□□□□ -1.4
TRAF3-209ENST00000560463 NTF3P20783 257 aa6.28□□□□□ -1.4
TRAF3-209ENST00000560463 CAMPP49913 170 aa6.28□□□□□ -1.4
TRAF3-209ENST00000560463 RAB4BP61018 213 aa6.28□□□□□ -1.4
TRAF3-209ENST00000560463 TWIST1Q15672 202 aa6.28□□□□□ -1.4
TRAF3-209ENST00000560463 KRTAP21-3Q3LHN1 58 aa6.28□□□□□ -1.4
TRAF3-209ENST00000560463 SAMD5Q5TGI4 173 aa6.28□□□□□ -1.4
TRAF3-209ENST00000560463 SPANXN1Q5VSR9 72 aa6.28□□□□□ -1.4
TRAF3-209ENST00000560463 CSNK1G2-AS1Q8NCQ2 148 aa6.28□□□□□ -1.4
TRAF3-209ENST00000560463 MRPL18Q9H0U6 180 aaKnown RBP6.28□□□□□ -1.4
TRAF3-209ENST00000560463 NOTCH1P46531 2555 aa6.28□□□□□ -1.4
TRAF3-209ENST00000560463 UBE2CO00762 179 aa6.27□□□□□ -1.41
TRAF3-209ENST00000560463 TRGC1P0CF51 173 aa6.27□□□□□ -1.41
TRAF3-209ENST00000560463 KRTAP10-11P60412 298 aa6.27□□□□□ -1.41
TRAF3-209ENST00000560463 ZNF415Q09FC8 603 aa6.27□□□□□ -1.41
TRAF3-209ENST00000560463 FABP9Q0Z7S8 132 aa6.27□□□□□ -1.41
TRAF3-209ENST00000560463 PIK3CD-AS1Q5SR53 167 aa6.27□□□□□ -1.41
TRAF3-209ENST00000560463 SMIM15Q7Z3B0 74 aa6.27□□□□□ -1.41
TRAF3-209ENST00000560463 ZFP82Q8N141 532 aa6.27□□□□□ -1.41
TRAF3-209ENST00000560463 C1orf158Q8N1D5 194 aa6.27□□□□□ -1.41
TRAF3-209ENST00000560463 FRZBQ92765 325 aa6.27□□□□□ -1.41
TRAF3-209ENST00000560463 PTH2Q96A98 100 aa6.27□□□□□ -1.41
TRAF3-209ENST00000560463 C9orf85Q96MD7 179 aa6.27□□□□□ -1.41
TRAF3-209ENST00000560463 SPXQ9BT56 116 aa6.27□□□□□ -1.41
TRAF3-209ENST00000560463 NDUFAF3Q9BU61 184 aa6.27□□□□□ -1.41
TRAF3-209ENST00000560463 TMEM191AQ9H0A3 160 aa6.27□□□□□ -1.41
TRAF3-209ENST00000560463 G3V4G9 280 aa6.26□□□□□ -1.41
TRAF3-209ENST00000560463 PHOX2AO14813 284 aa6.26□□□□□ -1.41
TRAF3-209ENST00000560463 NXPH4O95158 308 aa6.26□□□□□ -1.41
TRAF3-209ENST00000560463 APCSP02743 223 aa6.26□□□□□ -1.41
TRAF3-209ENST00000560463 FRMD6-AS1P0C7T7 363 aa6.26□□□□□ -1.41
TRAF3-209ENST00000560463 IGHV4-30-4P0DP06 118 aa6.26□□□□□ -1.41
TRAF3-209ENST00000560463 ZNF705AQ6ZN79 300 aaPredicted RBP6.26□□□□□ -1.41
TRAF3-209ENST00000560463 SYT8Q8NBV8 401 aa6.26□□□□□ -1.41
TRAF3-209ENST00000560463 OR10AG1Q8NH19 301 aa6.26□□□□□ -1.41
TRAF3-209ENST00000560463 TMEM263Q8WUH6 116 aaKnown RBP6.26□□□□□ -1.41
TRAF3-209ENST00000560463 MDFICQ9P1T7 246 aa6.26□□□□□ -1.41
TRAF3-209ENST00000560463 SMIM9A6NGZ8 99 aa6.25□□□□□ -1.41
TRAF3-209ENST00000560463 HTN1P15515 57 aa6.25□□□□□ -1.41
TRAF3-209ENST00000560463 C11orf72Q8NBR9 251 aa6.25□□□□□ -1.41
TRAF3-209ENST00000560463 C16orf74Q96GX8 76 aa6.25□□□□□ -1.41
TRAF3-209ENST00000560463 TIMM8BQ9Y5J9 83 aaPredicted RBP6.25□□□□□ -1.41
TRAF3-209ENST00000560463 NBEAL2Q6ZNJ1 2754 aa6.25□□□□□ -1.41
TRAF3-209ENST00000560463 MGAM2Q2M2H8 2515 aa6.24□□□□□ -1.41
TRAF3-209ENST00000560463 IGHV3OR16-12A0A075B7B8 117 aa6.24□□□□□ -1.41
TRAF3-209ENST00000560463 MUC21A0A0G2JKD1 596 aa6.24□□□□□ -1.41
TRAF3-209ENST00000560463 MUC21A0A140T8X8 626 aa6.24□□□□□ -1.41
TRAF3-209ENST00000560463 M0R2P5 195 aa6.24□□□□□ -1.41
TRAF3-209ENST00000560463 M0R381 172 aa6.24□□□□□ -1.41
TRAF3-209ENST00000560463 HIST1H2BKO60814 126 aa6.24□□□□□ -1.41
TRAF3-209ENST00000560463 HIST1H2BJP06899 126 aa6.24□□□□□ -1.41
TRAF3-209ENST00000560463 HIST1H2BOP23527 126 aa6.24□□□□□ -1.41
TRAF3-209ENST00000560463 HIST1H2BBP33778 126 aa6.24□□□□□ -1.41
TRAF3-209ENST00000560463 HIST1H2BDP58876 126 aa6.24□□□□□ -1.41
TRAF3-209ENST00000560463 SSTP61278 116 aa6.24□□□□□ -1.41
TRAF3-209ENST00000560463 HIST1H2BCP62807 126 aa6.24□□□□□ -1.41
TRAF3-209ENST00000560463 SLAQ13239 276 aa6.24□□□□□ -1.41
TRAF3-209ENST00000560463 HIST2H2BEQ16778 126 aa6.24□□□□□ -1.41
TRAF3-209ENST00000560463 RRN3P1Q2M238 152 aa6.24□□□□□ -1.41
TRAF3-209ENST00000560463 ZNF876PQ49A33 203 aa6.24□□□□□ -1.41
TRAF3-209ENST00000560463 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.24□□□□□ -1.41
TRAF3-209ENST00000560463 KPRPQ5T749 579 aaPredicted RBP6.24□□□□□ -1.41
TRAF3-209ENST00000560463 FAM104BQ5XKR9 115 aa6.24□□□□□ -1.41
TRAF3-209ENST00000560463 Q6ZWC4 215 aa6.24□□□□□ -1.41
TRAF3-209ENST00000560463 HIST1H2BHQ93079 126 aa6.24□□□□□ -1.41
TRAF3-209ENST00000560463 AP1S3Q96PC3 154 aa6.24□□□□□ -1.41
TRAF3-209ENST00000560463 RCHY1Q96PM5 261 aa6.24□□□□□ -1.41
TRAF3-209ENST00000560463 HIST1H2BNQ99877 126 aa6.24□□□□□ -1.41
TRAF3-209ENST00000560463 HIST1H2BMQ99879 126 aa6.24□□□□□ -1.41
TRAF3-209ENST00000560463 DPH3P1Q9H4G8 78 aa6.24□□□□□ -1.41
TRAF3-209ENST00000560463 MSRB1Q9NZV6 116 aa6.24□□□□□ -1.41
TRAF3-209ENST00000560463 TMA7Q9Y2S6 64 aaKnown RBP6.24□□□□□ -1.41
TRAF3-209ENST00000560463 PPBPP02775 128 aa6.23□□□□□ -1.41
TRAF3-209ENST00000560463 SMIM17P0DL12 118 aa6.23□□□□□ -1.41
TRAF3-209ENST00000560463 IL17DQ8TAD2 202 aa6.23□□□□□ -1.41
TRAF3-209ENST00000560463 RNASE8Q8TDE3 154 aaKnown RBP6.23□□□□□ -1.41
TRAF3-209ENST00000560463 GSN-AS1Q9NRJ2 163 aa6.23□□□□□ -1.41
TRAF3-209ENST00000560463 A8MWV9 139 aa6.22□□□□□ -1.41
TRAF3-209ENST00000560463 S100A6P06703 90 aa6.22□□□□□ -1.41
TRAF3-209ENST00000560463 AZU1P20160 251 aa6.22□□□□□ -1.41
TRAF3-209ENST00000560463 RAB4AP20338 218 aa6.22□□□□□ -1.41
TRAF3-209ENST00000560463 EVI2AP22794 236 aa6.22□□□□□ -1.41
TRAF3-209ENST00000560463 SRIP30626 198 aa6.22□□□□□ -1.41
TRAF3-209ENST00000560463 DAZ2Q13117 558 aaKnown RBP6.22□□□□□ -1.41
TRAF3-209ENST00000560463 LGALS9BQ3B8N2 356 aa6.22□□□□□ -1.41
TRAF3-209ENST00000560463 MRPL51Q4U2R6 128 aaKnown RBP6.22□□□□□ -1.41
TRAF3-209ENST00000560463 OR10J3Q5JRS4 329 aa6.22□□□□□ -1.41
TRAF3-209ENST00000560463 RASL10AQ92737 203 aa6.22□□□□□ -1.41
TRAF3-209ENST00000560463 RNF183Q96D59 192 aa6.22□□□□□ -1.41
TRAF3-209ENST00000560463 ALKBH7Q9BT30 221 aaPredicted RBP6.22□□□□□ -1.41
TRAF3-209ENST00000560463 LAMTOR2Q9Y2Q5 125 aa6.22□□□□□ -1.41
TRAF3-209ENST00000560463 SPRY2O43597 315 aa6.21□□□□□ -1.42
TRAF3-209ENST00000560463 PRM2P04554 102 aa6.21□□□□□ -1.42
TRAF3-209ENST00000560463 MIFP14174 115 aa6.21□□□□□ -1.42
TRAF3-209ENST00000560463 CKS2P33552 79 aa6.21□□□□□ -1.42
TRAF3-209ENST00000560463 Q0VG73 95 aa6.21□□□□□ -1.42
TRAF3-209ENST00000560463 KIAA1644Q3SXP7 199 aa6.21□□□□□ -1.42
TRAF3-209ENST00000560463 AMN1Q8IY45 258 aa6.21□□□□□ -1.42
TRAF3-209ENST00000560463 ORMDL3Q8N138 153 aa6.21□□□□□ -1.42
TRAF3-209ENST00000560463 POM121L12Q8N7R1 296 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms