RNA–Protein interactions for RNA: ENST00000560051.1

HMGB3P26-201, Transcript of high mobility group box 3 pseudogene 26, humanhuman

BASIC

Gene HMGB3P26, Length 582 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P26-201ENST00000560051 PLXNB1O43157 2135 aa3.19□□□□□ -1.9
HMGB3P26-201ENST00000560051 IGHV3-21A0A0B4J1V1 117 aa3.19□□□□□ -1.9
HMGB3P26-201ENST00000560051 C17orf51A8MQB3 221 aa3.19□□□□□ -1.9
HMGB3P26-201ENST00000560051 MSMBP08118 114 aa3.19□□□□□ -1.9
HMGB3P26-201ENST00000560051 SLC25A16P16260 332 aa3.19□□□□□ -1.9
HMGB3P26-201ENST00000560051 XCL1P47992 114 aa3.19□□□□□ -1.9
HMGB3P26-201ENST00000560051 SNRPGP62308 76 aaKnown RBP3.19□□□□□ -1.9
HMGB3P26-201ENST00000560051 ZNF117Q03924 483 aa3.19□□□□□ -1.9
HMGB3P26-201ENST00000560051 KRTAP5-11Q6L8G4 156 aa3.19□□□□□ -1.9
HMGB3P26-201ENST00000560051 LYPD2Q6UXB3 125 aa3.19□□□□□ -1.9
HMGB3P26-201ENST00000560051 Q6ZRP5 223 aa3.19□□□□□ -1.9
HMGB3P26-201ENST00000560051 VMO1Q7Z5L0 202 aa3.19□□□□□ -1.9
HMGB3P26-201ENST00000560051 NDUFA11Q86Y39 141 aa3.19□□□□□ -1.9
HMGB3P26-201ENST00000560051 LINC00269Q8N2A0 174 aa3.19□□□□□ -1.9
HMGB3P26-201ENST00000560051 PFN4Q8NHR9 129 aa3.19□□□□□ -1.9
HMGB3P26-201ENST00000560051 ATXN7L3BQ96GX2 97 aa3.19□□□□□ -1.9
HMGB3P26-201ENST00000560051 FAM103A1Q9BTL3 118 aaKnown RBP3.19□□□□□ -1.9
HMGB3P26-201ENST00000560051 CHCHD7Q9BUK0 85 aa3.19□□□□□ -1.9
HMGB3P26-201ENST00000560051 CACNA1IQ9P0X4 2223 aa3.19□□□□□ -1.9
HMGB3P26-201ENST00000560051 STRCP1A6NGW2 1772 aa3.18□□□□□ -1.9
HMGB3P26-201ENST00000560051 COL18A1P39060 1754 aa3.18□□□□□ -1.9
HMGB3P26-201ENST00000560051 IGLV4-3A0A075B6K6 122 aa3.18□□□□□ -1.9
HMGB3P26-201ENST00000560051 TRBV7-1A0A0A6YYK4 115 aa3.18□□□□□ -1.9
HMGB3P26-201ENST00000560051 IGHV7-4-1A0A0J9YVY3 117 aa3.18□□□□□ -1.9
HMGB3P26-201ENST00000560051 KRTAP4-16G5E9R7 235 aaPredicted RBP3.18□□□□□ -1.9
HMGB3P26-201ENST00000560051 GNRH2O43555 120 aa3.18□□□□□ -1.9
HMGB3P26-201ENST00000560051 ERC2-IT1O76042 136 aa3.18□□□□□ -1.9
HMGB3P26-201ENST00000560051 HMGN2P05204 90 aaKnown RBP3.18□□□□□ -1.9
HMGB3P26-201ENST00000560051 NANOS2P60321 138 aaKnown RBP3.18□□□□□ -1.9
HMGB3P26-201ENST00000560051 MIAQ16674 131 aa3.18□□□□□ -1.9
HMGB3P26-201ENST00000560051 S100A7L2Q5SY68 101 aa3.18□□□□□ -1.9
HMGB3P26-201ENST00000560051 ZNF826PQ6ZT77 177 aa3.18□□□□□ -1.9
HMGB3P26-201ENST00000560051 ZFAND2AQ8N6M9 145 aa3.18□□□□□ -1.9
HMGB3P26-201ENST00000560051 Q8N7P7 452 aa3.18□□□□□ -1.9
HMGB3P26-201ENST00000560051 NPBQ8NG41 125 aa3.18□□□□□ -1.9
HMGB3P26-201ENST00000560051 C11orf1Q9H5F2 150 aa3.18□□□□□ -1.9
HMGB3P26-201ENST00000560051 PKD1L3Q7Z443 1732 aa3.18□□□□□ -1.9
HMGB3P26-201ENST00000560051 PIKFYVEQ9Y2I7 2098 aa3.18□□□□□ -1.9
HMGB3P26-201ENST00000560051 C3P01024 1663 aa3.17□□□□□ -1.9
HMGB3P26-201ENST00000560051 HEATR1Q9H583 2144 aaKnown RBP3.17□□□□□ -1.9
HMGB3P26-201ENST00000560051 ABCC8Q09428 1581 aa3.17□□□□□ -1.9
HMGB3P26-201ENST00000560051 QSER1Q2KHR3 1735 aa3.17□□□□□ -1.9
HMGB3P26-201ENST00000560051 TNS1Q9HBL0 1735 aaKnown RBP3.17□□□□□ -1.9
HMGB3P26-201ENST00000560051 IGLV8-61A0A075B6I0 122 aa3.17□□□□□ -1.9
HMGB3P26-201ENST00000560051 IGLV3-9A0A075B6K5 115 aa3.17□□□□□ -1.9
HMGB3P26-201ENST00000560051 IGKV1D-17A0A075B6S4 117 aa3.17□□□□□ -1.9
HMGB3P26-201ENST00000560051 TRAV7A0A075B6U4 112 aa3.17□□□□□ -1.9
HMGB3P26-201ENST00000560051 TRAV1-2A0A0B4J238 106 aa3.17□□□□□ -1.9
HMGB3P26-201ENST00000560051 TRBV10-3A0A0K0K1G6 114 aa3.17□□□□□ -1.9
HMGB3P26-201ENST00000560051 TRBV10-2A0A0K0K1G8 114 aa3.17□□□□□ -1.9
HMGB3P26-201ENST00000560051 hDV103S1A0JD37 113 aa3.17□□□□□ -1.9
HMGB3P26-201ENST00000560051 LEPROTL1O95214 131 aa3.17□□□□□ -1.9
HMGB3P26-201ENST00000560051 IGHV1-69P01742 117 aa3.17□□□□□ -1.9
HMGB3P26-201ENST00000560051 COX6CP09669 75 aa3.17□□□□□ -1.9
HMGB3P26-201ENST00000560051 ATXN8Q156A1 80 aa3.17□□□□□ -1.9
HMGB3P26-201ENST00000560051 IL17AQ16552 155 aa3.17□□□□□ -1.9
HMGB3P26-201ENST00000560051 FAM167A-AS1Q96KT0 104 aa3.17□□□□□ -1.9
HMGB3P26-201ENST00000560051 LIMD2Q9BT23 127 aa3.17□□□□□ -1.9
HMGB3P26-201ENST00000560051 PRO1854Q9UHT4 67 aa3.17□□□□□ -1.9
HMGB3P26-201ENST00000560051 CELA1Q9UNI1 258 aa3.17□□□□□ -1.9
HMGB3P26-201ENST00000560051 PHLDA3Q9Y5J5 127 aa3.17□□□□□ -1.9
HMGB3P26-201ENST00000560051 HILPDAQ9Y5L2 63 aa3.17□□□□□ -1.9
HMGB3P26-201ENST00000560051 KDM6BO15054 1643 aa3.17□□□□□ -1.9
HMGB3P26-201ENST00000560051 LOC285556D6RIA3 1793 aa3.17□□□□□ -1.9
HMGB3P26-201ENST00000560051 TDRD6O60522 2096 aaKnown RBP3.16□□□□□ -1.9
HMGB3P26-201ENST00000560051 UBR1Q8IWV7 1749 aa3.16□□□□□ -1.9
HMGB3P26-201ENST00000560051 SCN3AQ9NY46 2000 aa3.16□□□□□ -1.9
HMGB3P26-201ENST00000560051 IGKV1-6A0A0C4DH72 117 aa3.16□□□□□ -1.9
HMGB3P26-201ENST00000560051 CEBPZOSA8MTT3 80 aa3.16□□□□□ -1.9
HMGB3P26-201ENST00000560051 SH2D1AO60880 128 aa3.16□□□□□ -1.9
HMGB3P26-201ENST00000560051 IGKV1-39P01597 117 aa3.16□□□□□ -1.9
HMGB3P26-201ENST00000560051 IGKV1D-39P04432 117 aa3.16□□□□□ -1.9
HMGB3P26-201ENST00000560051 IFI27P40305 119 aaPredicted RBP3.16□□□□□ -1.9
HMGB3P26-201ENST00000560051 NOVP48745 357 aa3.16□□□□□ -1.9
HMGB3P26-201ENST00000560051 PLGLAQ15195 96 aa3.16□□□□□ -1.9
HMGB3P26-201ENST00000560051 C9orf66Q5T8R8 295 aa3.16□□□□□ -1.9
HMGB3P26-201ENST00000560051 LYPD5Q6UWN5 251 aa3.16□□□□□ -1.9
HMGB3P26-201ENST00000560051 FGF23Q9GZV9 251 aaPredicted RBP3.16□□□□□ -1.9
HMGB3P26-201ENST00000560051 ZNF355PQ9NSJ1 428 aa3.16□□□□□ -1.9
HMGB3P26-201ENST00000560051 NDUFA12Q9UI09 145 aa3.16□□□□□ -1.9
HMGB3P26-201ENST00000560051 ZNF580Q9UK33 172 aa3.16□□□□□ -1.9
HMGB3P26-201ENST00000560051 FAM208AQ9UK61 1670 aaKnown RBP3.16□□□□□ -1.9
HMGB3P26-201ENST00000560051 SLX4Q8IY92 1834 aa3.16□□□□□ -1.9
HMGB3P26-201ENST00000560051 ADGRB2O60241 1585 aa3.16□□□□□ -1.9
HMGB3P26-201ENST00000560051 TRIP12Q14669 1992 aaPredicted RBP3.16□□□□□ -1.9
HMGB3P26-201ENST00000560051 CPAMD8Q8IZJ3 1885 aa3.16□□□□□ -1.9
HMGB3P26-201ENST00000560051 C5P01031 1676 aa3.15□□□□□ -1.9
HMGB3P26-201ENST00000560051 TUBGCP6Q96RT7 1819 aa3.15□□□□□ -1.91
HMGB3P26-201ENST00000560051 TRBV25-1A0A075B6N4 114 aa3.15□□□□□ -1.91
HMGB3P26-201ENST00000560051 IGHV3-49A0A0A0MS15 119 aa3.15□□□□□ -1.91
HMGB3P26-201ENST00000560051 IGHV3-66A0A0C4DH42 116 aa3.15□□□□□ -1.91
HMGB3P26-201ENST00000560051 C19orf71A6NCJ1 209 aa3.15□□□□□ -1.91
HMGB3P26-201ENST00000560051 C16orf97H3BN30 126 aa3.15□□□□□ -1.91
HMGB3P26-201ENST00000560051 SOCS3O14543 225 aa3.15□□□□□ -1.91
HMGB3P26-201ENST00000560051 CCL3P10147 92 aa3.15□□□□□ -1.91
HMGB3P26-201ENST00000560051 CCL5P13501 91 aa3.15□□□□□ -1.91
HMGB3P26-201ENST00000560051 Q6JHZ5 121 aa3.15□□□□□ -1.91
HMGB3P26-201ENST00000560051 DYNAPQ8N1N2 210 aa3.15□□□□□ -1.91
HMGB3P26-201ENST00000560051 CNEP1R1Q8N9A8 125 aa3.15□□□□□ -1.91
HMGB3P26-201ENST00000560051 SMCR5Q8TEV8 140 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms