RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 FABP4P15090 132 aa10.16□□□□□ -0.78
TPM1-215ENST00000558868 TRPT1Q86TN4 253 aaKnown RBP10.16□□□□□ -0.78
TPM1-215ENST00000558868 AMN1Q8IY45 258 aa10.16□□□□□ -0.78
TPM1-215ENST00000558868 ORMDL3Q8N138 153 aa10.16□□□□□ -0.78
TPM1-215ENST00000558868 TMEM256Q8N2U0 113 aa10.16□□□□□ -0.78
TPM1-215ENST00000558868 PACRGQ96M98 296 aaPredicted RBP10.16□□□□□ -0.78
TPM1-215ENST00000558868 HIST1H2BLQ99880 126 aa10.16□□□□□ -0.78
TPM1-215ENST00000558868 LINC00467Q9BRT7 94 aa10.16□□□□□ -0.78
TPM1-215ENST00000558868 U3KQK5 164 aa10.16□□□□□ -0.78
TPM1-215ENST00000558868 RBMY1BA6NDE4 496 aaKnown RBP10.15□□□□□ -0.78
TPM1-215ENST00000558868 RBMY1EA6NEQ0 496 aaKnown RBP10.15□□□□□ -0.78
TPM1-215ENST00000558868 IFITM10A6NMD0 228 aa10.15□□□□□ -0.78
TPM1-215ENST00000558868 RBMY1DP0C7P1 496 aaKnown RBP10.15□□□□□ -0.78
TPM1-215ENST00000558868 RNASE3P12724 160 aaKnown RBP10.15□□□□□ -0.78
TPM1-215ENST00000558868 FXYD7P58549 80 aa10.15□□□□□ -0.78
TPM1-215ENST00000558868 ZNF124Q15973 351 aa10.15□□□□□ -0.78
TPM1-215ENST00000558868 MRPL51Q4U2R6 128 aaKnown RBP10.15□□□□□ -0.78
TPM1-215ENST00000558868 SYT8Q8NBV8 401 aa10.15□□□□□ -0.78
TPM1-215ENST00000558868 MSRB1Q9NZV6 116 aa10.15□□□□□ -0.78
TPM1-215ENST00000558868 TP53TG3Q9ULZ0 132 aa10.15□□□□□ -0.78
TPM1-215ENST00000558868 LAMTOR2Q9Y2Q5 125 aa10.15□□□□□ -0.78
TPM1-215ENST00000558868 WNK1Q9H4A3 2382 aa10.14□□□□□ -0.79
TPM1-215ENST00000558868 IGHV3-16A0A0C4DH30 117 aa10.14□□□□□ -0.79
TPM1-215ENST00000558868 CRXO43186 299 aaPredicted RBP10.14□□□□□ -0.79
TPM1-215ENST00000558868 NXPH4O95158 308 aa10.14□□□□□ -0.79
TPM1-215ENST00000558868 RAB4AP20338 218 aa10.14□□□□□ -0.79
TPM1-215ENST00000558868 CKS2P33552 79 aa10.14□□□□□ -0.79
TPM1-215ENST00000558868 OR10D4PQ8NGN7 298 aa10.14□□□□□ -0.79
TPM1-215ENST00000558868 CHCHD1Q96BP2 118 aaKnown RBP10.14□□□□□ -0.79
TPM1-215ENST00000558868 PRELID3AQ96N28 172 aa10.14□□□□□ -0.79
TPM1-215ENST00000558868 AP1S3Q96PC3 154 aa10.14□□□□□ -0.79
TPM1-215ENST00000558868 ZNF747Q9BV97 191 aa10.14□□□□□ -0.79
TPM1-215ENST00000558868 SAMD10Q9BYL1 202 aa10.14□□□□□ -0.79
TPM1-215ENST00000558868 CBY3A6NI87 242 aa10.13□□□□□ -0.79
TPM1-215ENST00000558868 D6R8Y8 96 aa10.13□□□□□ -0.79
TPM1-215ENST00000558868 M0R381 172 aa10.13□□□□□ -0.79
TPM1-215ENST00000558868 SMIM6P0DI80 62 aa10.13□□□□□ -0.79
TPM1-215ENST00000558868 IQCJQ1A5X6 159 aa10.13□□□□□ -0.79
TPM1-215ENST00000558868 KRTAP24-1Q3LI83 254 aa10.13□□□□□ -0.79
TPM1-215ENST00000558868 MORN3Q6PF18 240 aaPredicted RBP10.13□□□□□ -0.79
TPM1-215ENST00000558868 GTSCR1Q86UQ5 136 aa10.13□□□□□ -0.79
TPM1-215ENST00000558868 Q8N1Y9 231 aa10.13□□□□□ -0.79
TPM1-215ENST00000558868 C9orf85Q96MD7 179 aa10.13□□□□□ -0.79
TPM1-215ENST00000558868 ANK2Q01484 3957 aa10.13□□□□□ -0.79
TPM1-215ENST00000558868 HSBP1O75506 76 aa10.12□□□□□ -0.79
TPM1-215ENST00000558868 LINC00310P59036 64 aa10.12□□□□□ -0.79
TPM1-215ENST00000558868 NIT1Q86X76 327 aa10.12□□□□□ -0.79
TPM1-215ENST00000558868 WFDC9Q8NEX5 89 aa10.12□□□□□ -0.79
TPM1-215ENST00000558868 MRAP2Q96G30 205 aa10.12□□□□□ -0.79
TPM1-215ENST00000558868 RNF185Q96GF1 192 aa10.12□□□□□ -0.79
TPM1-215ENST00000558868 C1QTNF4Q9BXJ3 329 aa10.12□□□□□ -0.79
TPM1-215ENST00000558868 DPH3P1Q9H4G8 78 aa10.12□□□□□ -0.79
TPM1-215ENST00000558868 PKD1L1Q8TDX9 2849 aa10.12□□□□□ -0.79
TPM1-215ENST00000558868 AGRNO00468 2067 aa10.11□□□□□ -0.79
TPM1-215ENST00000558868 NUPR1O60356 82 aa10.11□□□□□ -0.79
TPM1-215ENST00000558868 SMIM17P0DL12 118 aa10.11□□□□□ -0.79
TPM1-215ENST00000558868 PMCHP20382 165 aa10.11□□□□□ -0.79
TPM1-215ENST00000558868 EVI2AP22794 236 aa10.11□□□□□ -0.79
TPM1-215ENST00000558868 ZNF415Q09FC8 603 aa10.11□□□□□ -0.79
TPM1-215ENST00000558868 PRR31Q5SQ13 230 aa10.11□□□□□ -0.79
TPM1-215ENST00000558868 RNASEKQ6P5S7 137 aaKnown RBP10.11□□□□□ -0.79
TPM1-215ENST00000558868 RCHY1Q96PM5 261 aa10.11□□□□□ -0.79
TPM1-215ENST00000558868 LINC01587Q99440 93 aa10.11□□□□□ -0.79
TPM1-215ENST00000558868 C19orf73Q9NVV2 129 aa10.11□□□□□ -0.79
TPM1-215ENST00000558868 SORL1Q92673 2214 aa10.11□□□□□ -0.79
TPM1-215ENST00000558868 LINC00614P0C842 121 aa10.1□□□□□ -0.79
TPM1-215ENST00000558868 SHISA2Q6UWI4 295 aa10.1□□□□□ -0.79
TPM1-215ENST00000558868 LINC00518Q8N0U6 118 aa10.1□□□□□ -0.79
TPM1-215ENST00000558868 PRSS3P2Q8NHM4 247 aa10.1□□□□□ -0.79
TPM1-215ENST00000558868 TMEM158Q8WZ71 300 aa10.1□□□□□ -0.79
TPM1-215ENST00000558868 TMEM208Q9BTX3 173 aa10.1□□□□□ -0.79
TPM1-215ENST00000558868 TGP01266 2768 aa10.09□□□□□ -0.79
TPM1-215ENST00000558868 PPP1R17O96001 155 aa10.09□□□□□ -0.79
TPM1-215ENST00000558868 RBMY1A1P0DJD3 496 aaKnown RBP10.09□□□□□ -0.79
TPM1-215ENST00000558868 RBMY1CP0DJD4 496 aa10.09□□□□□ -0.79
TPM1-215ENST00000558868 AMTP48728 403 aa10.09□□□□□ -0.79
TPM1-215ENST00000558868 RBMY1FQ15415 496 aaKnown RBP10.09□□□□□ -0.79
TPM1-215ENST00000558868 PIK3CD-AS1Q5SR53 167 aa10.09□□□□□ -0.79
TPM1-215ENST00000558868 FA2HQ7L5A8 372 aa10.09□□□□□ -0.79
TPM1-215ENST00000558868 C3orf56Q8N813 242 aa10.09□□□□□ -0.79
TPM1-215ENST00000558868 PTH2Q96A98 100 aa10.09□□□□□ -0.79
TPM1-215ENST00000558868 MAP1LC3AQ9H492 121 aa10.09□□□□□ -0.79
TPM1-215ENST00000558868 GSN-AS1Q9NRJ2 163 aa10.09□□□□□ -0.79
TPM1-215ENST00000558868 MDFICQ9P1T7 246 aa10.09□□□□□ -0.79
TPM1-215ENST00000558868 XCL2Q9UBD3 114 aa10.09□□□□□ -0.79
TPM1-215ENST00000558868 GOLT1BQ9Y3E0 138 aa10.09□□□□□ -0.79
TPM1-215ENST00000558868 C12orf54Q6X4T0 127 aa10.08□□□□□ -0.8
TPM1-215ENST00000558868 C14orf178Q8N769 122 aaPredicted RBP10.08□□□□□ -0.8
TPM1-215ENST00000558868 SPXQ9BT56 116 aa10.08□□□□□ -0.8
TPM1-215ENST00000558868 TNFRSF6BO95407 300 aa10.07□□□□□ -0.8
TPM1-215ENST00000558868 HTN1P15515 57 aa10.07□□□□□ -0.8
TPM1-215ENST00000558868 POM121L12Q8N7R1 296 aa10.07□□□□□ -0.8
TPM1-215ENST00000558868 C12orf57Q99622 126 aa10.07□□□□□ -0.8
TPM1-215ENST00000558868 SMKR1H3BMG3 65 aa10.06□□□□□ -0.8
TPM1-215ENST00000558868 NCR2O95944 276 aa10.06□□□□□ -0.8
TPM1-215ENST00000558868 NPYP01303 97 aa10.06□□□□□ -0.8
TPM1-215ENST00000558868 MGPP08493 103 aa10.06□□□□□ -0.8
TPM1-215ENST00000558868 ZNF876PQ49A33 203 aa10.06□□□□□ -0.8
TPM1-215ENST00000558868 NDUFAF3Q9BU61 184 aa10.06□□□□□ -0.8
TPM1-215ENST00000558868 NXT2Q9NPJ8 142 aaKnown RBP10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms