RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 CGB3P0DN86 165 aa10.9□□□□□ -0.67
VTI1B-204ENST00000554659 ANKRD39Q53RE8 183 aa10.9□□□□□ -0.67
VTI1B-204ENST00000554659 IGFL2Q6UWQ7 119 aa10.9□□□□□ -0.67
VTI1B-204ENST00000554659 LINC00173Q6ZV60 143 aa10.9□□□□□ -0.67
VTI1B-204ENST00000554659 MAPK1IP1LQ8NDC0 245 aa10.9□□□□□ -0.67
VTI1B-204ENST00000554659 GPR179Q6PRD1 2367 aa10.89□□□□□ -0.67
VTI1B-204ENST00000554659 CLPSL1A2RUU4 121 aa10.89□□□□□ -0.67
VTI1B-204ENST00000554659 CGB7P0DN87 165 aa10.89□□□□□ -0.67
VTI1B-204ENST00000554659 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.89□□□□□ -0.67
VTI1B-204ENST00000554659 IGKV2-29A2NJV5 120 aaPredicted RBP10.89□□□□□ -0.67
VTI1B-204ENST00000554659 PRSS47A8MTI9 375 aa10.89□□□□□ -0.67
VTI1B-204ENST00000554659 CR1LQ2VPA4 569 aa10.89□□□□□ -0.67
VTI1B-204ENST00000554659 PRSS33Q8NF86 280 aa10.88□□□□□ -0.67
VTI1B-204ENST00000554659 IGFBPL1Q8WX77 278 aa10.88□□□□□ -0.67
VTI1B-204ENST00000554659 C11orf1Q9H5F2 150 aa10.88□□□□□ -0.67
VTI1B-204ENST00000554659 PIP4P1Q86T03 277 aa10.88□□□□□ -0.67
VTI1B-204ENST00000554659 CENPVL3A0A0U1RRI6 287 aa10.88□□□□□ -0.67
VTI1B-204ENST00000554659 C3orf56Q8N813 242 aa10.88□□□□□ -0.67
VTI1B-204ENST00000554659 NUP210Q8TEM1 1887 aaPredicted RBP10.88□□□□□ -0.67
VTI1B-204ENST00000554659 GTSF1Q8WW33 167 aa10.88□□□□□ -0.67
VTI1B-204ENST00000554659 SPRY2O43597 315 aa10.87□□□□□ -0.67
VTI1B-204ENST00000554659 IGLV2-14P01704 120 aa10.87□□□□□ -0.67
VTI1B-204ENST00000554659 IGHV7-81A0A0B4J1V7 117 aa10.87□□□□□ -0.67
VTI1B-204ENST00000554659 IGKV3D-7A0A0C4DH55 119 aa10.87□□□□□ -0.67
VTI1B-204ENST00000554659 HIGD1BQ9P298 99 aa10.87□□□□□ -0.67
VTI1B-204ENST00000554659 DYSFO75923 2080 aa10.87□□□□□ -0.67
VTI1B-204ENST00000554659 A0A1B0GX51 115 aa10.87□□□□□ -0.67
VTI1B-204ENST00000554659 IGHG2P01859 326 aa10.87□□□□□ -0.67
VTI1B-204ENST00000554659 HERV-K104P63124 156 aa10.87□□□□□ -0.67
VTI1B-204ENST00000554659 SLC25A29Q8N8R3 303 aa10.87□□□□□ -0.67
VTI1B-204ENST00000554659 IGHV4-4A0A075B6R2 117 aa10.87□□□□□ -0.67
VTI1B-204ENST00000554659 PCNX1Q96RV3 2341 aa10.86□□□□□ -0.67
VTI1B-204ENST00000554659 CTSGP08311 255 aa10.86□□□□□ -0.67
VTI1B-204ENST00000554659 APOC4P55056 127 aa10.86□□□□□ -0.67
VTI1B-204ENST00000554659 RNASE8Q8TDE3 154 aaKnown RBP10.86□□□□□ -0.67
VTI1B-204ENST00000554659 TRAV4A0A0B4J268 109 aa10.86□□□□□ -0.67
VTI1B-204ENST00000554659 RPL39LQ96EH5 51 aaKnown RBP10.86□□□□□ -0.67
VTI1B-204ENST00000554659 Q96MF0 132 aa10.86□□□□□ -0.67
VTI1B-204ENST00000554659 FAM236AA0A1B0GUQ0 79 aa10.85□□□□□ -0.67
VTI1B-204ENST00000554659 FAM236BA0A1B0GV22 79 aa10.85□□□□□ -0.67
VTI1B-204ENST00000554659 RITA1Q96K30 269 aa10.85□□□□□ -0.67
VTI1B-204ENST00000554659 PLXNB3Q9ULL4 1909 aa10.85□□□□□ -0.67
VTI1B-204ENST00000554659 WI2-2373I1.2A0A1W2PRP0 233 aa10.85□□□□□ -0.67
VTI1B-204ENST00000554659 UBE2BP63146 152 aa10.85□□□□□ -0.67
VTI1B-204ENST00000554659 C5orf38Q86SI9 138 aa10.85□□□□□ -0.67
VTI1B-204ENST00000554659 IGHV4-28A0A0C4DH34 117 aa10.85□□□□□ -0.67
VTI1B-204ENST00000554659 TRBV6-1A0A0K0K1D8 114 aa10.85□□□□□ -0.67
VTI1B-204ENST00000554659 MSRB1Q9NZV6 116 aa10.85□□□□□ -0.67
VTI1B-204ENST00000554659 DENND4CQ5VZ89 1909 aa10.85□□□□□ -0.67
VTI1B-204ENST00000554659 RMI2Q96E14 147 aa10.85□□□□□ -0.67
VTI1B-204ENST00000554659 NOTCH4Q99466 2003 aa10.85□□□□□ -0.67
VTI1B-204ENST00000554659 A4D1N5 150 aa10.85□□□□□ -0.67
VTI1B-204ENST00000554659 BUB3O43684 328 aa10.85□□□□□ -0.67
VTI1B-204ENST00000554659 WFDC2Q14508 124 aa10.85□□□□□ -0.67
VTI1B-204ENST00000554659 ZFP2Q6ZN57 461 aa10.85□□□□□ -0.67
VTI1B-204ENST00000554659 WFDC9Q8NEX5 89 aa10.85□□□□□ -0.67
VTI1B-204ENST00000554659 U3KQE9 123 aa10.85□□□□□ -0.67
VTI1B-204ENST00000554659 IGLV2-23P01705 113 aa10.84□□□□□ -0.67
VTI1B-204ENST00000554659 FUSP35637 526 aaKnown RBP eCLIP10.84□□□□□ -0.67
VTI1B-204ENST00000554659 DKK4Q9UBT3 224 aa10.84□□□□□ -0.67
VTI1B-204ENST00000554659 NDUFC2O95298 119 aa10.84□□□□□ -0.67
VTI1B-204ENST00000554659 RNF152Q8N8N0 203 aa10.84□□□□□ -0.67
VTI1B-204ENST00000554659 ATOX1O00244 68 aa10.84□□□□□ -0.67
VTI1B-204ENST00000554659 C16orf54Q6UWD8 224 aa10.84□□□□□ -0.67
VTI1B-204ENST00000554659 TEN1Q86WV5 123 aa10.84□□□□□ -0.67
VTI1B-204ENST00000554659 MUSTN1Q8IVN3 82 aa10.84□□□□□ -0.67
VTI1B-204ENST00000554659 VPREB3Q9UKI3 123 aa10.84□□□□□ -0.67
VTI1B-204ENST00000554659 IGKV1OR2-108A0A075B7D4 117 aa10.83□□□□□ -0.68
VTI1B-204ENST00000554659 NOP10Q9NPE3 64 aaKnown RBP10.83□□□□□ -0.68
VTI1B-204ENST00000554659 A0A0B4J2C4 111 aa10.83□□□□□ -0.68
VTI1B-204ENST00000554659 KMT2EQ8IZD2 1858 aa10.83□□□□□ -0.68
VTI1B-204ENST00000554659 A0A0J9YY99 117 aa10.83□□□□□ -0.68
VTI1B-204ENST00000554659 CTRLP40313 264 aa10.83□□□□□ -0.68
VTI1B-204ENST00000554659 IGKV2D-24A0A075B6R9 120 aa10.83□□□□□ -0.68
VTI1B-204ENST00000554659 TEX22C9J3V5 150 aa10.82□□□□□ -0.68
VTI1B-204ENST00000554659 PSMB8P28062 276 aa10.82□□□□□ -0.68
VTI1B-204ENST00000554659 Q6ZQT7 251 aa10.82□□□□□ -0.68
VTI1B-204ENST00000554659 ICOSQ9Y6W8 199 aa10.82□□□□□ -0.68
VTI1B-204ENST00000554659 A0A0J9YXV3 536 aa10.82□□□□□ -0.68
VTI1B-204ENST00000554659 TAX1BP3O14907 124 aa10.82□□□□□ -0.68
VTI1B-204ENST00000554659 FXYD2P54710 66 aa10.82□□□□□ -0.68
VTI1B-204ENST00000554659 LINC01620Q4KN68 170 aa10.82□□□□□ -0.68
VTI1B-204ENST00000554659 CHD3Q12873 2000 aaKnown RBP10.82□□□□□ -0.68
VTI1B-204ENST00000554659 WNK1Q9H4A3 2382 aa10.82□□□□□ -0.68
VTI1B-204ENST00000554659 ODF3L1Q8IXM7 274 aa10.82□□□□□ -0.68
VTI1B-204ENST00000554659 SND1-IT1Q9HBX3 110 aa10.82□□□□□ -0.68
VTI1B-204ENST00000554659 J3KT08 172 aa10.81□□□□□ -0.68
VTI1B-204ENST00000554659 DEFB112Q30KQ8 113 aa10.81□□□□□ -0.68
VTI1B-204ENST00000554659 TTTY13Q9BZ97 58 aa10.81□□□□□ -0.68
VTI1B-204ENST00000554659 GTF3C1Q12789 2109 aa10.81□□□□□ -0.68
VTI1B-204ENST00000554659 H0YGX0 51 aa10.81□□□□□ -0.68
VTI1B-204ENST00000554659 C9orf47Q6ZRZ4 202 aa10.81□□□□□ -0.68
VTI1B-204ENST00000554659 MALRD1Q5VYJ5 2156 aa10.81□□□□□ -0.68
VTI1B-204ENST00000554659 CHKB-CPT1BH3BT56 60 aa10.81□□□□□ -0.68
VTI1B-204ENST00000554659 COX7B2Q8TF08 81 aa10.81□□□□□ -0.68
VTI1B-204ENST00000554659 MED14OSP0DP75 135 aa10.81□□□□□ -0.68
VTI1B-204ENST00000554659 IGHV4-59P01825 116 aa10.8□□□□□ -0.68
VTI1B-204ENST00000554659 COL4A3Q01955 1670 aa10.8□□□□□ -0.68
VTI1B-204ENST00000554659 WT1P19544 449 aaPredicted RBP10.8□□□□□ -0.68
VTI1B-204ENST00000554659 IGF2-ASQ6U949 168 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms