RNA–Protein interactions for RNA: ENST00000552960.5

HDAC7-230, Transcript of histone deacetylase 7, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene HDAC7, Length 3,216 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-230ENST00000552960 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.46□□□□□ -0.89
HDAC7-230ENST00000552960 VMO1Q7Z5L0 202 aa9.46□□□□□ -0.89
HDAC7-230ENST00000552960 GLMPQ8WWB7 406 aa9.46□□□□□ -0.89
HDAC7-230ENST00000552960 BPESC1Q9GZL8 116 aa9.46□□□□□ -0.89
HDAC7-230ENST00000552960 HOXA3O43365 443 aaPredicted RBP9.46□□□□□ -0.89
HDAC7-230ENST00000552960 BUB3O43684 328 aa9.46□□□□□ -0.89
HDAC7-230ENST00000552960 SPINK8P0C7L1 97 aa9.46□□□□□ -0.89
HDAC7-230ENST00000552960 RPL11P62913 178 aaKnown RBP9.46□□□□□ -0.89
HDAC7-230ENST00000552960 C14orf178Q8N769 122 aaPredicted RBP9.46□□□□□ -0.89
HDAC7-230ENST00000552960 NRACQ8N912 160 aa9.46□□□□□ -0.89
HDAC7-230ENST00000552960 MAPK1IP1LQ8NDC0 245 aa9.46□□□□□ -0.89
HDAC7-230ENST00000552960 PIFOQ8TCI5 191 aa9.46□□□□□ -0.89
HDAC7-230ENST00000552960 RPL39LQ96EH5 51 aaKnown RBP9.46□□□□□ -0.89
HDAC7-230ENST00000552960 PSMB2P49721 201 aa9.46□□□□□ -0.9
HDAC7-230ENST00000552960 C16orf92Q96LL3 132 aa9.46□□□□□ -0.9
HDAC7-230ENST00000552960 CNFNQ9BYD5 112 aa9.46□□□□□ -0.9
HDAC7-230ENST00000552960 ANKRD17O75179 2603 aaKnown RBP9.45□□□□□ -0.9
HDAC7-230ENST00000552960 IGHV7-81A0A0B4J1V7 117 aa9.45□□□□□ -0.9
HDAC7-230ENST00000552960 H7C1H1 209 aa9.45□□□□□ -0.9
HDAC7-230ENST00000552960 HLA-DRB4P13762 266 aa9.45□□□□□ -0.9
HDAC7-230ENST00000552960 PLNP26678 52 aa9.45□□□□□ -0.9
HDAC7-230ENST00000552960 PSMG4Q5JS54 123 aa9.45□□□□□ -0.9
HDAC7-230ENST00000552960 COX8CQ7Z4L0 72 aa9.45□□□□□ -0.9
HDAC7-230ENST00000552960 TMEM190Q8WZ59 177 aa9.45□□□□□ -0.9
HDAC7-230ENST00000552960 HLA-DRB4X5D2U9 266 aa9.45□□□□□ -0.9
HDAC7-230ENST00000552960 LINC01549A6NIU2 74 aa9.45□□□□□ -0.9
HDAC7-230ENST00000552960 ZNF815PA8K554 130 aa9.45□□□□□ -0.9
HDAC7-230ENST00000552960 F8VRH5 84 aa9.45□□□□□ -0.9
HDAC7-230ENST00000552960 KLHL30-AS1Q8NEE0 82 aa9.45□□□□□ -0.9
HDAC7-230ENST00000552960 OR11H6Q8NGC7 330 aa9.45□□□□□ -0.9
HDAC7-230ENST00000552960 MYMXA0A1B0GTQ4 84 aa9.44□□□□□ -0.9
HDAC7-230ENST00000552960 SCGB1A1P11684 91 aa9.44□□□□□ -0.9
HDAC7-230ENST00000552960 IGHV7-4-1A0A0J9YVY3 117 aa9.44□□□□□ -0.9
HDAC7-230ENST00000552960 LINC01548A6NM66 108 aa9.44□□□□□ -0.9
HDAC7-230ENST00000552960 ATP6V0E1O15342 81 aa9.44□□□□□ -0.9
HDAC7-230ENST00000552960 IGHV4-39P01824 125 aa9.44□□□□□ -0.9
HDAC7-230ENST00000552960 MT-ATP8P03928 68 aa9.44□□□□□ -0.9
HDAC7-230ENST00000552960 PRTN3P24158 256 aa9.44□□□□□ -0.9
HDAC7-230ENST00000552960 ARL3P36405 182 aa9.44□□□□□ -0.9
HDAC7-230ENST00000552960 ANXA2RQ3ZCQ2 193 aa9.44□□□□□ -0.9
HDAC7-230ENST00000552960 C8orf86Q6ZUL3 223 aa9.44□□□□□ -0.9
HDAC7-230ENST00000552960 LY6G5BQ8NDX9 201 aa9.44□□□□□ -0.9
HDAC7-230ENST00000552960 PRADC1Q9BSG0 188 aa9.44□□□□□ -0.9
HDAC7-230ENST00000552960 SMIM2Q9BVW6 85 aa9.44□□□□□ -0.9
HDAC7-230ENST00000552960 SLC25A16P16260 332 aa9.43□□□□□ -0.9
HDAC7-230ENST00000552960 ZNF843Q8N446 348 aa9.43□□□□□ -0.9
HDAC7-230ENST00000552960 METTL26Q96S19 204 aa9.43□□□□□ -0.9
HDAC7-230ENST00000552960 PHLDA3Q9Y5J5 127 aa9.43□□□□□ -0.9
HDAC7-230ENST00000552960 GATA3P23771 443 aa9.43□□□□□ -0.9
HDAC7-230ENST00000552960 MRAP2Q96G30 205 aa9.43□□□□□ -0.9
HDAC7-230ENST00000552960 SLC50A1Q9BRV3 221 aa9.43□□□□□ -0.9
HDAC7-230ENST00000552960 APCP25054 2843 aa9.42□□□□□ -0.9
HDAC7-230ENST00000552960 LGALS1P09382 135 aaKnown RBP9.42□□□□□ -0.9
HDAC7-230ENST00000552960 SUMO2P61956 95 aaKnown RBP9.42□□□□□ -0.9
HDAC7-230ENST00000552960 PRR9Q5T870 116 aa9.42□□□□□ -0.9
HDAC7-230ENST00000552960 C2orf66Q6UXQ4 117 aa9.42□□□□□ -0.9
HDAC7-230ENST00000552960 ZFP2Q6ZN57 461 aa9.42□□□□□ -0.9
HDAC7-230ENST00000552960 ZNF48Q96MX3 618 aaPredicted RBP9.42□□□□□ -0.9
HDAC7-230ENST00000552960 SPATA25Q9BR10 227 aa9.42□□□□□ -0.9
HDAC7-230ENST00000552960 TRBV7-3A0A075B6L6 115 aa9.42□□□□□ -0.9
HDAC7-230ENST00000552960 BRD3OSQ6XYD6 125 aa9.42□□□□□ -0.9
HDAC7-230ENST00000552960 PLEKHB2Q96CS7 222 aa9.42□□□□□ -0.9
HDAC7-230ENST00000552960 TAL2Q16559 108 aa9.41□□□□□ -0.9
HDAC7-230ENST00000552960 ZFAND3Q9H8U3 227 aa9.41□□□□□ -0.9
HDAC7-230ENST00000552960 TRAV8-2A0A0B4J237 113 aa9.41□□□□□ -0.9
HDAC7-230ENST00000552960 LINC01546A6NGU7 62 aa9.41□□□□□ -0.9
HDAC7-230ENST00000552960 PRSS29PA6NIE9 313 aa9.41□□□□□ -0.9
HDAC7-230ENST00000552960 MXRA5Q9NR99 2828 aa9.41□□□□□ -0.9
HDAC7-230ENST00000552960 HECTD1Q9ULT8 2610 aa9.41□□□□□ -0.9
HDAC7-230ENST00000552960 SRSF2Q01130 221 aaKnown RBP9.41□□□□□ -0.9
HDAC7-230ENST00000552960 MORN3Q6PF18 240 aaPredicted RBP9.41□□□□□ -0.9
HDAC7-230ENST00000552960 Q8N9W7 124 aa9.41□□□□□ -0.9
HDAC7-230ENST00000552960 SS18L2Q9UHA2 77 aa9.41□□□□□ -0.9
HDAC7-230ENST00000552960 SCGB1C2P0DMR2 95 aa9.4□□□□□ -0.9
HDAC7-230ENST00000552960 FOXI1Q12951 378 aa9.4□□□□□ -0.9
HDAC7-230ENST00000552960 ORMDL2Q53FV1 153 aa9.4□□□□□ -0.9
HDAC7-230ENST00000552960 TMEM219Q86XT9 240 aa9.4□□□□□ -0.9
HDAC7-230ENST00000552960 SVIPQ8NHG7 77 aa9.4□□□□□ -0.9
HDAC7-230ENST00000552960 HELZ2Q9BYK8 2649 aaKnown RBP9.4□□□□□ -0.91
HDAC7-230ENST00000552960 PRRC2AP48634 2157 aaKnown RBP9.4□□□□□ -0.91
HDAC7-230ENST00000552960 RNASE4P34096 147 aaKnown RBP9.4□□□□□ -0.91
HDAC7-230ENST00000552960 LMO4P61968 165 aa9.4□□□□□ -0.91
HDAC7-230ENST00000552960 CCDC140Q96MF4 163 aa9.4□□□□□ -0.91
HDAC7-230ENST00000552960 CLPSL1A2RUU4 121 aa9.39□□□□□ -0.91
HDAC7-230ENST00000552960 ODF3BA8MYP8 253 aa9.39□□□□□ -0.91
HDAC7-230ENST00000552960 F6UB75 175 aa9.39□□□□□ -0.91
HDAC7-230ENST00000552960 H7C2G1 150 aa9.39□□□□□ -0.91
HDAC7-230ENST00000552960 RASL10AQ92737 203 aa9.39□□□□□ -0.91
HDAC7-230ENST00000552960 RNF183Q96D59 192 aa9.39□□□□□ -0.91
HDAC7-230ENST00000552960 LY6EQ16553 131 aa9.39□□□□□ -0.91
HDAC7-230ENST00000552960 NFE4Q86UQ8 179 aa9.39□□□□□ -0.91
HDAC7-230ENST00000552960 BAALCQ8WXS3 180 aa9.39□□□□□ -0.91
HDAC7-230ENST00000552960 DLX4Q92988 240 aaPredicted RBP9.39□□□□□ -0.91
HDAC7-230ENST00000552960 GNRH2O43555 120 aa9.39□□□□□ -0.91
HDAC7-230ENST00000552960 PRO0461Q9UI25 63 aa9.39□□□□□ -0.91
HDAC7-230ENST00000552960 F5H697 171 aa9.38□□□□□ -0.91
HDAC7-230ENST00000552960 M0R1W7 72 aa9.38□□□□□ -0.91
HDAC7-230ENST00000552960 DUSP14O95147 198 aaKnown RBP9.38□□□□□ -0.91
HDAC7-230ENST00000552960 ATP5J2P56134 94 aa9.38□□□□□ -0.91
HDAC7-230ENST00000552960 TMEM170BQ5T4T1 132 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms